RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 FUT11Q495W5 492 aa15.19■□□□□ 0.02
ALMS1-202ENST00000464408 SGO2Q562F6 1265 aa15.19■□□□□ 0.02
ALMS1-202ENST00000464408 PM20D1Q6GTS8 502 aa15.19■□□□□ 0.02
ALMS1-202ENST00000464408 SLC23A3Q6PIS1 610 aa15.19■□□□□ 0.02
ALMS1-202ENST00000464408 KIAA1324Q6UXG2 1013 aaKnown RBP15.19■□□□□ 0.02
ALMS1-202ENST00000464408 RSRC2Q7L4I2 434 aaKnown RBP15.19■□□□□ 0.02
ALMS1-202ENST00000464408 FMNL3Q8IVF7 1028 aa15.19■□□□□ 0.02
ALMS1-202ENST00000464408 TTC39CQ8N584 583 aa15.19■□□□□ 0.02
ALMS1-202ENST00000464408 SORCS1Q8WY21 1168 aa15.19■□□□□ 0.02
ALMS1-202ENST00000464408 TFAP2BQ92481 460 aa15.19■□□□□ 0.02
ALMS1-202ENST00000464408 EDEM1Q92611 657 aa15.19■□□□□ 0.02
ALMS1-202ENST00000464408 KAT5Q92993 513 aa15.19■□□□□ 0.02
ALMS1-202ENST00000464408 SMARCE1Q969G3 411 aa15.19■□□□□ 0.02
ALMS1-202ENST00000464408 GSDMAQ96QA5 445 aa15.19■□□□□ 0.02
ALMS1-202ENST00000464408 CDK5RAP1Q96SZ6 601 aaKnown RBP15.19■□□□□ 0.02
ALMS1-202ENST00000464408 ZSWIM1Q9BR11 485 aa15.19■□□□□ 0.02
ALMS1-202ENST00000464408 NUSAP1Q9BXS6 441 aaKnown RBP15.19■□□□□ 0.02
ALMS1-202ENST00000464408 DNAI2Q9GZS0 605 aa15.19■□□□□ 0.02
ALMS1-202ENST00000464408 SFMBT1Q9UHJ3 866 aa15.19■□□□□ 0.02
ALMS1-202ENST00000464408 ZNF510Q9Y2H8 683 aa15.19■□□□□ 0.02
ALMS1-202ENST00000464408 SLC27A6Q9Y2P4 619 aa15.19■□□□□ 0.02
ALMS1-202ENST00000464408 STON1Q9Y6Q2 735 aa15.19■□□□□ 0.02
ALMS1-202ENST00000464408 YJEFN3A6XGL0 299 aa15.18■□□□□ 0.02
ALMS1-202ENST00000464408 E7ENQ6 273 aa15.18■□□□□ 0.02
ALMS1-202ENST00000464408 O00370 1275 aa15.18■□□□□ 0.02
ALMS1-202ENST00000464408 PIK3R2O00459 728 aa15.18■□□□□ 0.02
ALMS1-202ENST00000464408 XPO1O14980 1071 aaKnown RBP15.18■□□□□ 0.02
ALMS1-202ENST00000464408 MSI1O43347 362 aaKnown RBP15.18■□□□□ 0.02
ALMS1-202ENST00000464408 TSPAN3O60637 253 aa15.18■□□□□ 0.02
ALMS1-202ENST00000464408 BCAT1P54687 386 aa15.18■□□□□ 0.02
ALMS1-202ENST00000464408 FKBP3Q00688 224 aaKnown RBP15.18■□□□□ 0.02
ALMS1-202ENST00000464408 BST2Q10589 180 aaKnown RBP15.18■□□□□ 0.02
ALMS1-202ENST00000464408 LMAN2Q12907 356 aa15.18■□□□□ 0.02
ALMS1-202ENST00000464408 FOXC1Q12948 553 aa15.18■□□□□ 0.02
ALMS1-202ENST00000464408 SPDYCQ5MJ68 293 aa15.18■□□□□ 0.02
ALMS1-202ENST00000464408 TMEM215Q68D42 235 aa15.18■□□□□ 0.02
ALMS1-202ENST00000464408 ARHGAP18Q8N392 663 aa15.18■□□□□ 0.02
ALMS1-202ENST00000464408 TRIML1Q8N9V2 468 aa15.18■□□□□ 0.02
ALMS1-202ENST00000464408 RBBP8NLQ8NC74 664 aaPredicted RBP15.18■□□□□ 0.02
ALMS1-202ENST00000464408 HSPA12BQ96MM6 686 aa15.18■□□□□ 0.02
ALMS1-202ENST00000464408 GTPBP2Q9BX10 602 aaKnown RBP15.18■□□□□ 0.02
ALMS1-202ENST00000464408 DCLK3Q9C098 648 aa15.18■□□□□ 0.02
ALMS1-202ENST00000464408 MKRN2Q9H000 416 aaKnown RBP15.18■□□□□ 0.02
ALMS1-202ENST00000464408 CAPN10Q9HC96 672 aa15.18■□□□□ 0.02
ALMS1-202ENST00000464408 THAP10Q9P2Z0 257 aaPredicted RBP15.18■□□□□ 0.02
ALMS1-202ENST00000464408 ARMCX3Q9UH62 379 aaPredicted RBP15.18■□□□□ 0.02
ALMS1-202ENST00000464408 WASF3Q9UPY6 502 aa15.18■□□□□ 0.02
ALMS1-202ENST00000464408 RNF225M0QZC1 329 aaPredicted RBP15.17■□□□□ 0.02
ALMS1-202ENST00000464408 SMC2O95347 1197 aa15.17■□□□□ 0.02
ALMS1-202ENST00000464408 LCP1P13796 627 aa15.17■□□□□ 0.02
ALMS1-202ENST00000464408 CSRP1P21291 193 aaKnown RBP15.17■□□□□ 0.02
ALMS1-202ENST00000464408 BMP6P22004 513 aa15.17■□□□□ 0.02
ALMS1-202ENST00000464408 PRKCHP24723 683 aa15.17■□□□□ 0.02
ALMS1-202ENST00000464408 CHKAP35790 457 aa15.17■□□□□ 0.02
ALMS1-202ENST00000464408 FMO5P49326 533 aa15.17■□□□□ 0.02
ALMS1-202ENST00000464408 RGS7P49802 495 aa15.17■□□□□ 0.02
ALMS1-202ENST00000464408 SGSHP51688 502 aa15.17■□□□□ 0.02
ALMS1-202ENST00000464408 LRRC63Q05C16 580 aa15.17■□□□□ 0.02
ALMS1-202ENST00000464408 TRIP4Q15650 581 aaPredicted RBP15.17■□□□□ 0.02
ALMS1-202ENST00000464408 DUOXA1Q1HG43 343 aa15.17■□□□□ 0.02
ALMS1-202ENST00000464408 PKDCCQ504Y2 493 aa15.17■□□□□ 0.02
ALMS1-202ENST00000464408 SLC36A4Q6YBV0 504 aa15.17■□□□□ 0.02
ALMS1-202ENST00000464408 CACUL1Q86Y37 369 aa15.17■□□□□ 0.02
ALMS1-202ENST00000464408 FAM217AQ8IXS0 508 aa15.17■□□□□ 0.02
ALMS1-202ENST00000464408 CCDC34Q96HJ3 373 aa15.17■□□□□ 0.02
ALMS1-202ENST00000464408 LRRC4Q9HBW1 653 aa15.17■□□□□ 0.02
ALMS1-202ENST00000464408 MAN1B1Q9UKM7 699 aa15.17■□□□□ 0.02
ALMS1-202ENST00000464408 STRIP2Q9ULQ0 834 aa15.17■□□□□ 0.02
ALMS1-202ENST00000464408 CHD6Q8TD26 2715 aa15.17■□□□□ 0.02
ALMS1-202ENST00000464408 GOLGA6L4A6NEF3 574 aa15.16■□□□□ 0.02
ALMS1-202ENST00000464408 KCNJ18B7U540 433 aa15.16■□□□□ 0.02
ALMS1-202ENST00000464408 GFRA2O00451 464 aa15.16■□□□□ 0.02
ALMS1-202ENST00000464408 ZNF217O75362 1048 aa15.16■□□□□ 0.02
ALMS1-202ENST00000464408 CEACAM1P13688 526 aa15.16■□□□□ 0.02
ALMS1-202ENST00000464408 HLA-EP13747 358 aa15.16■□□□□ 0.02
ALMS1-202ENST00000464408 MAOBP27338 520 aa15.16■□□□□ 0.02
ALMS1-202ENST00000464408 HOXD9P28356 352 aaPredicted RBP15.16■□□□□ 0.02
ALMS1-202ENST00000464408 SLC8A3P57103 927 aa15.16■□□□□ 0.02
ALMS1-202ENST00000464408 ENPP2Q13822 863 aa15.16■□□□□ 0.02
ALMS1-202ENST00000464408 ZNF234Q14588 700 aa15.16■□□□□ 0.02
ALMS1-202ENST00000464408 BSPRYQ5W0U4 402 aa15.16■□□□□ 0.02
ALMS1-202ENST00000464408 TMEM270Q6UE05 265 aa15.16■□□□□ 0.02
ALMS1-202ENST00000464408 ANKS1BQ7Z6G8 1248 aa15.16■□□□□ 0.02
ALMS1-202ENST00000464408 CPXM2Q8N436 756 aa15.16■□□□□ 0.02
ALMS1-202ENST00000464408 CLEC4CQ8WTT0 213 aa15.16■□□□□ 0.02
ALMS1-202ENST00000464408 DDI1Q8WTU0 396 aa15.16■□□□□ 0.02
ALMS1-202ENST00000464408 PLD4Q96BZ4 506 aa15.16■□□□□ 0.02
ALMS1-202ENST00000464408 IPO9Q96P70 1041 aaKnown RBP15.16■□□□□ 0.02
ALMS1-202ENST00000464408 FAM124BQ9H5Z6 455 aaPredicted RBP15.16■□□□□ 0.02
ALMS1-202ENST00000464408 HESX1Q9UBX0 185 aa15.16■□□□□ 0.02
ALMS1-202ENST00000464408 SLC6A14Q9UN76 642 aa15.16■□□□□ 0.02
ALMS1-202ENST00000464408 KNL1Q8NG31 2342 aa15.16■□□□□ 0.02
ALMS1-202ENST00000464408 C1QTNF9BB2RNN3 333 aa15.15■□□□□ 0.02
ALMS1-202ENST00000464408 SERPINF2P08697 491 aa15.15■□□□□ 0.02
ALMS1-202ENST00000464408 C1QTNF9P0C862 333 aa15.15■□□□□ 0.02
ALMS1-202ENST00000464408 VDRP11473 427 aa15.15■□□□□ 0.02
ALMS1-202ENST00000464408 BRD2P25440 801 aaKnown RBP15.15■□□□□ 0.02
ALMS1-202ENST00000464408 HOXD12P35452 270 aa15.15■□□□□ 0.02
ALMS1-202ENST00000464408 COPAP53621 1224 aa15.15■□□□□ 0.02
ALMS1-202ENST00000464408 DAOAP59103 153 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms