RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 ZFYVE19Q96K21 471 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 BIRC8Q96P09 236 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 ZSCAN10Q96SZ4 725 aaPredicted RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 ZSCAN5AQ9BUG6 496 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 ADNPQ9H2P0 1102 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 Q9H521 79 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 SLITRK6Q9H5Y7 841 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 C12orf10Q9HB07 376 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 DCAF16Q9NXF7 216 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 FETUBQ9UGM5 382 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 INPP5FQ9Y2H2 1132 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 STARD13Q9Y3M8 1113 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 DTNAQ9Y4J8 743 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 CORINQ9Y5Q5 1042 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 SLC4A4Q9Y6R1 1079 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 GAKO14976 1311 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 PFASO15067 1338 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 TNRC18O15417 2968 aaPredicted RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 COL4A4P53420 1690 aaPredicted RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 A0A1W2PPW3 197 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 B8ZZF3 427 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 hCG_2039718K7EN88 272 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 SH2B2O14492 632 aaPredicted RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 HOXC11O43248 304 aaPredicted RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 IDH3BO43837 385 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 SULT1C4O75897 302 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 MFN2O95140 757 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 FKBP9O95302 570 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 DDX58O95786 925 aaKnown RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 FAM58BPP0C7Q3 252 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 CALM1P0DP23 149 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 CALM2P0DP24 149 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 CALM3P0DP25 149 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 ICAM2P13598 275 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 HNF1BP35680 557 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 FDFT1P37268 417 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 PIK3CAP42336 1068 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 HNRNPFP52597 415 aaKnown RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 MLLT6P55198 1093 aaPredicted RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 RACK1P63244 317 aaKnown RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 PRAMEP78395 509 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 MRPS15P82914 257 aaKnown RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 EXOSC10Q01780 885 aaKnown RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 MRPL28Q13084 256 aaKnown RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 MOGSQ13724 837 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 UBAP2LQ14157 1087 aaKnown RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 PTK2BQ14289 1009 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 MAPK11Q15759 364 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 NPTX1Q15818 432 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 C21orf62-AS1Q17RA5 79 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 FAM214AQ32MH5 1076 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 C4orf17Q53FE4 359 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 SLC45A4Q5BKX6 768 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 HERC4Q5GLZ8 1057 aaPredicted RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 SPDYAQ5MJ70 313 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 ZNF618Q5T7W0 954 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 USPL1Q5W0Q7 1092 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 SLFN13Q68D06 897 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 DCLRE1AQ6PJP8 1040 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 SLC30A10Q6XR72 485 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 TAS1R3Q7RTX0 852 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 NET1Q7Z628 596 aaPredicted RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 PRUNE1Q86TP1 453 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 TTC7BQ86TV6 843 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 ULK2Q8IYT8 1036 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 SPATA5Q8NB90 893 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 LEMD2Q8NC56 503 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 TSPAN14Q8NG11 270 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 SPATA20Q8TB22 786 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 RASGRP4Q8TDF6 673 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 GRK7Q8WTQ7 553 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 PDCD6IPQ8WUM4 868 aaKnown RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 KCTD4Q8WVF5 259 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 KBTBD7Q8WVZ9 684 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 ZFPM2Q8WW38 1151 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 ZNF75CPQ92670 426 aaPredicted RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 EAF2Q96CJ1 260 aaPredicted RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 CCDC120Q96HB5 630 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 CNOT6LQ96LI5 555 aaKnown RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 ZNF512Q96ME7 567 aaPredicted RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 CDK5RAP1Q96SZ6 601 aaKnown RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 RBM15Q96T37 977 aaKnown RBP eCLIP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 UHRF1Q96T88 793 aaPredicted RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 RIOK1Q9BRS2 568 aaKnown RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 MYL10Q9BUA6 226 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 ACAT2Q9BWD1 397 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 TRIM55Q9BYV6 548 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 SLC2A11Q9BYW1 496 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 UNKQ9C0B0 810 aaKnown RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 TTYH3Q9C0H2 523 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 MUC3BQ9H195 1237 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 SEMA6BQ9H3T3 888 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 ALG13Q9NP73 1137 aaKnown RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 BRD7Q9NPI1 651 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 SAR1AQ9NR31 198 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 MOCS1Q9NZB8 636 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 TMEM59LQ9UK28 342 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 DNM3Q9UQ16 869 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 NR2E1Q9Y466 385 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 ROBO3Q96MS0 1386 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms