RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 IGLV3-19P01714 112 aa21.78■■□□□ 1.08
CPSF7-209ENST00000463244 ZNF883P0CG24 379 aa21.78■■□□□ 1.08
CPSF7-209ENST00000463244 RALAP11233 206 aa21.78■■□□□ 1.08
CPSF7-209ENST00000463244 COG7P83436 770 aa21.78■■□□□ 1.08
CPSF7-209ENST00000463244 DCAF12L1Q5VU92 463 aa21.78■■□□□ 1.08
CPSF7-209ENST00000463244 ANKS1BQ7Z6G8 1248 aa21.78■■□□□ 1.08
CPSF7-209ENST00000463244 SLCO6A1Q86UG4 719 aa21.78■■□□□ 1.08
CPSF7-209ENST00000463244 CEP57L1Q8IYX8 460 aa21.78■■□□□ 1.08
CPSF7-209ENST00000463244 SPRYD3Q8NCJ5 442 aa21.78■■□□□ 1.08
CPSF7-209ENST00000463244 UCMAQ8WVF2 138 aa21.78■■□□□ 1.08
CPSF7-209ENST00000463244 SIPA1Q96FS4 1042 aa21.78■■□□□ 1.08
CPSF7-209ENST00000463244 PIWIL1Q96J94 861 aaKnown RBP21.78■■□□□ 1.08
CPSF7-209ENST00000463244 DUSP16Q9BY84 665 aa21.78■■□□□ 1.08
CPSF7-209ENST00000463244 IMPG2Q9BZV3 1241 aa21.78■■□□□ 1.08
CPSF7-209ENST00000463244 MIR1-1HGQ9H1L0 117 aa21.78■■□□□ 1.08
CPSF7-209ENST00000463244 EXOC1Q9NV70 894 aa21.78■■□□□ 1.08
CPSF7-209ENST00000463244 BCAT2O15382 392 aaPredicted RBP21.77■■□□□ 1.08
CPSF7-209ENST00000463244 SYNCRIPO60506 623 aaKnown RBP21.77■■□□□ 1.08
CPSF7-209ENST00000463244 CILPO75339 1184 aa21.77■■□□□ 1.08
CPSF7-209ENST00000463244 CORO1AP31146 461 aaKnown RBP21.77■■□□□ 1.08
CPSF7-209ENST00000463244 ME1P48163 572 aa21.77■■□□□ 1.08
CPSF7-209ENST00000463244 COPAP53621 1224 aa21.77■■□□□ 1.08
CPSF7-209ENST00000463244 CEP135Q66GS9 1140 aa21.77■■□□□ 1.08
CPSF7-209ENST00000463244 DCLK3Q9C098 648 aa21.77■■□□□ 1.08
CPSF7-209ENST00000463244 CCDC86Q9H6F5 360 aaKnown RBP21.77■■□□□ 1.08
CPSF7-209ENST00000463244 GAREM1Q9H706 876 aa21.77■■□□□ 1.08
CPSF7-209ENST00000463244 IL21RQ9HBE5 538 aa21.77■■□□□ 1.08
CPSF7-209ENST00000463244 KIAA1522Q9P206 1035 aaPredicted RBP21.77■■□□□ 1.08
CPSF7-209ENST00000463244 RASAL2Q9UJF2 1139 aa21.77■■□□□ 1.08
CPSF7-209ENST00000463244 FRMD4BQ9Y2L6 1034 aa21.77■■□□□ 1.08
CPSF7-209ENST00000463244 URB1O60287 2271 aaKnown RBP21.77■■□□□ 1.08
CPSF7-209ENST00000463244 BPTFQ12830 3046 aa21.77■■□□□ 1.07
CPSF7-209ENST00000463244 METTL12A8MUP2 240 aa21.76■■□□□ 1.07
CPSF7-209ENST00000463244 ACTN4O43707 911 aaKnown RBP21.76■■□□□ 1.07
CPSF7-209ENST00000463244 CER1O95813 267 aa21.76■■□□□ 1.07
CPSF7-209ENST00000463244 SLFN14P0C7P3 912 aa21.76■■□□□ 1.07
CPSF7-209ENST00000463244 BNC1Q01954 994 aa21.76■■□□□ 1.07
CPSF7-209ENST00000463244 EFEMP1Q12805 493 aa21.76■■□□□ 1.07
CPSF7-209ENST00000463244 ZNF234Q14588 700 aa21.76■■□□□ 1.07
CPSF7-209ENST00000463244 EIF4HQ15056 248 aaKnown RBP21.76■■□□□ 1.07
CPSF7-209ENST00000463244 FOXD4L6Q3SYB3 417 aaPredicted RBP21.76■■□□□ 1.07
CPSF7-209ENST00000463244 KMT5BQ4FZB7 885 aa21.76■■□□□ 1.07
CPSF7-209ENST00000463244 PPP1R26Q5T8A7 1209 aaPredicted RBP21.76■■□□□ 1.07
CPSF7-209ENST00000463244 FOXD4L5Q5VV16 416 aaPredicted RBP21.76■■□□□ 1.07
CPSF7-209ENST00000463244 IL27RAQ6UWB1 636 aa21.76■■□□□ 1.07
CPSF7-209ENST00000463244 FOXD4L3Q6VB84 417 aaPredicted RBP21.76■■□□□ 1.07
CPSF7-209ENST00000463244 RBBP8NLQ8NC74 664 aaPredicted RBP21.76■■□□□ 1.07
CPSF7-209ENST00000463244 C1orf216Q8TAB5 229 aa21.76■■□□□ 1.07
CPSF7-209ENST00000463244 BAHD1Q8TBE0 780 aaPredicted RBP21.76■■□□□ 1.07
CPSF7-209ENST00000463244 SETD7Q8WTS6 366 aaKnown RBP21.76■■□□□ 1.07
CPSF7-209ENST00000463244 FOXD4L4Q8WXT5 416 aaPredicted RBP21.76■■□□□ 1.07
CPSF7-209ENST00000463244 PRCCQ92733 491 aaPredicted RBP21.76■■□□□ 1.07
CPSF7-209ENST00000463244 PAGE5Q96GU1 130 aa21.76■■□□□ 1.07
CPSF7-209ENST00000463244 NUP58Q9BVL2 599 aa21.76■■□□□ 1.07
CPSF7-209ENST00000463244 ELOVL2Q9NXB9 296 aa21.76■■□□□ 1.07
CPSF7-209ENST00000463244 SERTAD1Q9UHV2 236 aa21.76■■□□□ 1.07
CPSF7-209ENST00000463244 AGO1Q9UL18 857 aaKnown RBP21.76■■□□□ 1.07
CPSF7-209ENST00000463244 CLEC4EQ9ULY5 219 aa21.76■■□□□ 1.07
CPSF7-209ENST00000463244 MAPK13O15264 365 aa21.75■■□□□ 1.07
CPSF7-209ENST00000463244 HMBSP08397 361 aa21.75■■□□□ 1.07
CPSF7-209ENST00000463244 CD58P19256 250 aa21.75■■□□□ 1.07
CPSF7-209ENST00000463244 MATKP42679 507 aa21.75■■□□□ 1.07
CPSF7-209ENST00000463244 VAMP7P51809 220 aa21.75■■□□□ 1.07
CPSF7-209ENST00000463244 E2F5Q15329 346 aa21.75■■□□□ 1.07
CPSF7-209ENST00000463244 HLA-BQ31612 363 aa21.75■■□□□ 1.07
CPSF7-209ENST00000463244 C19orf48Q6RUI8 117 aa21.75■■□□□ 1.07
CPSF7-209ENST00000463244 CPXM2Q8N436 756 aa21.75■■□□□ 1.07
CPSF7-209ENST00000463244 TAS1R2Q8TE23 839 aa21.75■■□□□ 1.07
CPSF7-209ENST00000463244 NIF3L1Q9GZT8 377 aa21.75■■□□□ 1.07
CPSF7-209ENST00000463244 TM7SF3Q9NS93 570 aa21.75■■□□□ 1.07
CPSF7-209ENST00000463244 EIF2B4Q9UI10 523 aaKnown RBP21.75■■□□□ 1.07
CPSF7-209ENST00000463244 FNDC3AQ9Y2H6 1198 aaKnown RBP21.75■■□□□ 1.07
CPSF7-209ENST00000463244 KIF20AO95235 890 aa21.74■■□□□ 1.07
CPSF7-209ENST00000463244 CYBBP04839 570 aa21.74■■□□□ 1.07
CPSF7-209ENST00000463244 ACADMP11310 421 aa21.74■■□□□ 1.07
CPSF7-209ENST00000463244 PRKCHP24723 683 aa21.74■■□□□ 1.07
CPSF7-209ENST00000463244 GCLMP48507 274 aa21.74■■□□□ 1.07
CPSF7-209ENST00000463244 DBX2Q6ZNG2 339 aa21.74■■□□□ 1.07
CPSF7-209ENST00000463244 CACUL1Q86Y37 369 aa21.74■■□□□ 1.07
CPSF7-209ENST00000463244 DENND1CQ8IV53 801 aa21.74■■□□□ 1.07
CPSF7-209ENST00000463244 MDM1Q8TC05 714 aa21.74■■□□□ 1.07
CPSF7-209ENST00000463244 SLC2A11Q9BYW1 496 aa21.74■■□□□ 1.07
CPSF7-209ENST00000463244 TOR4AQ9NXH8 423 aa21.74■■□□□ 1.07
CPSF7-209ENST00000463244 TRAF3IP3Q9Y228 551 aa21.74■■□□□ 1.07
CPSF7-209ENST00000463244 CALUO43852 315 aaPredicted RBP21.73■■□□□ 1.07
CPSF7-209ENST00000463244 DKK1O94907 266 aa21.73■■□□□ 1.07
CPSF7-209ENST00000463244 EPHX1P07099 455 aa21.73■■□□□ 1.07
CPSF7-209ENST00000463244 TRIM49P0CI25 452 aa21.73■■□□□ 1.07
CPSF7-209ENST00000463244 TRIM49CP0CI26 452 aa21.73■■□□□ 1.07
CPSF7-209ENST00000463244 PDIA4P13667 645 aaKnown RBP21.73■■□□□ 1.07
CPSF7-209ENST00000463244 PPP3CAQ08209 521 aa21.73■■□□□ 1.07
CPSF7-209ENST00000463244 TMEM215Q68D42 235 aa21.73■■□□□ 1.07
CPSF7-209ENST00000463244 FAM217AQ8IXS0 508 aa21.73■■□□□ 1.07
CPSF7-209ENST00000463244 SORCS1Q8WY21 1168 aa21.73■■□□□ 1.07
CPSF7-209ENST00000463244 CIPCQ9C0C6 399 aa21.73■■□□□ 1.07
CPSF7-209ENST00000463244 DNAI2Q9GZS0 605 aa21.73■■□□□ 1.07
CPSF7-209ENST00000463244 PCED1AQ9H1Q7 454 aa21.73■■□□□ 1.07
CPSF7-209ENST00000463244 MARCH2Q9P0N8 246 aa21.73■■□□□ 1.07
CPSF7-209ENST00000463244 PCDHGB2Q9Y5G2 931 aa21.73■■□□□ 1.07
CPSF7-209ENST00000463244 KNTC1P50748 2209 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms