RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 ZNF510Q9Y2H8 683 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 SAR1BQ9Y6B6 198 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 ZFP37Q9Y6Q3 630 aaPredicted RBP11.1□□□□□ -0.63
RTF1-202ENST00000462276 UNC80Q8N2C7 3258 aa11.1□□□□□ -0.63
RTF1-202ENST00000462276 A0A1W2PRU2 124 aa11.09□□□□□ -0.63
RTF1-202ENST00000462276 SLC12A8A0AV02 714 aa11.09□□□□□ -0.63
RTF1-202ENST00000462276 KCNU1A8MYU2 1149 aa11.09□□□□□ -0.63
RTF1-202ENST00000462276 FSHRP23945 695 aa11.09□□□□□ -0.63
RTF1-202ENST00000462276 GTF2F1P35269 517 aaKnown RBP eCLIP11.09□□□□□ -0.63
RTF1-202ENST00000462276 AVPR1AP37288 418 aa11.09□□□□□ -0.63
RTF1-202ENST00000462276 NRG1Q02297 640 aaPredicted RBP11.09□□□□□ -0.63
RTF1-202ENST00000462276 SLC25A11Q02978 314 aaKnown RBP11.09□□□□□ -0.63
RTF1-202ENST00000462276 EFHC2Q5JST6 749 aa11.09□□□□□ -0.63
RTF1-202ENST00000462276 RARS2Q5T160 578 aaKnown RBP11.09□□□□□ -0.63
RTF1-202ENST00000462276 OTUD1Q5VV17 481 aaPredicted RBP11.09□□□□□ -0.63
RTF1-202ENST00000462276 MICALL1Q8N3F8 863 aa11.09□□□□□ -0.63
RTF1-202ENST00000462276 ATP6V0D2Q8N8Y2 350 aa11.09□□□□□ -0.63
RTF1-202ENST00000462276 SHKBP1Q8TBC3 707 aa11.09□□□□□ -0.63
RTF1-202ENST00000462276 LRCH3Q96II8 777 aa11.09□□□□□ -0.63
RTF1-202ENST00000462276 BTN2A3PQ96KV6 586 aa11.09□□□□□ -0.63
RTF1-202ENST00000462276 NAP1L3Q99457 506 aaPredicted RBP11.09□□□□□ -0.63
RTF1-202ENST00000462276 DDX50Q9BQ39 737 aaKnown RBP11.09□□□□□ -0.63
RTF1-202ENST00000462276 KLF16Q9BXK1 252 aaPredicted RBP11.09□□□□□ -0.63
RTF1-202ENST00000462276 S1PR5Q9H228 398 aa11.09□□□□□ -0.63
RTF1-202ENST00000462276 ARHGEF38Q9NXL2 777 aa11.09□□□□□ -0.63
RTF1-202ENST00000462276 SFMBT1Q9UHJ3 866 aa11.09□□□□□ -0.63
RTF1-202ENST00000462276 RASAL2Q9UJF2 1139 aa11.09□□□□□ -0.63
RTF1-202ENST00000462276 ARHGAP26Q9UNA1 814 aa11.09□□□□□ -0.63
RTF1-202ENST00000462276 HYOU1Q9Y4L1 999 aa11.09□□□□□ -0.63
RTF1-202ENST00000462276 NLRC5Q86WI3 1866 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 C2orf78A6NCI8 922 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 DDX3YO15523 660 aaKnown RBP11.08□□□□□ -0.64
RTF1-202ENST00000462276 TBX18O95935 607 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 CKMP06732 381 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 RARAP10276 462 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 MBL2P11226 248 aaPredicted RBP11.08□□□□□ -0.64
RTF1-202ENST00000462276 TCF3P15923 654 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 L1CAMP32004 1257 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 PTPN7P35236 360 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 HCAR3P49019 387 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 SLC11A2P49281 568 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 TAS2R40P59535 323 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 DPYSL2Q16555 572 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 ZC3H12AQ5D1E8 599 aaKnown RBP11.08□□□□□ -0.64
RTF1-202ENST00000462276 GPR158Q5T848 1215 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 SH3PXD2AQ5TCZ1 1133 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 TXNDC8Q6A555 127 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 FAM131BQ86XD5 332 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 MIB1Q86YT6 1006 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 CMTM8Q8IZV2 173 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 C12orf76Q8N812 135 aaPredicted RBP11.08□□□□□ -0.64
RTF1-202ENST00000462276 KCTD6Q8NC69 237 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 ADAM32Q8TC27 787 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 FAM71BQ8TC56 605 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 E2F7Q96AV8 911 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 FCRL2Q96LA5 508 aaPredicted RBP11.08□□□□□ -0.64
RTF1-202ENST00000462276 SLC46A2Q9BY10 475 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 RNF38Q9H0F5 515 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 TKTL2Q9H0I9 626 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 GOLPH3Q9H4A6 298 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 KIF9Q9HAQ2 790 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 TRPC7Q9HCX4 862 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 HCFC1R1Q9NWW0 138 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 CLDND1Q9NY35 253 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 CLEC1BQ9P126 229 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 PCSK1NQ9UHG2 260 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 LSM7Q9UK45 103 aaKnown RBP11.08□□□□□ -0.64
RTF1-202ENST00000462276 TTC7AQ9ULT0 858 aaPredicted RBP11.08□□□□□ -0.64
RTF1-202ENST00000462276 FZD10Q9ULW2 581 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 PLXNA4Q9HCM2 1894 aa11.08□□□□□ -0.64
RTF1-202ENST00000462276 E2F8A0AVK6 867 aa11.07□□□□□ -0.64
RTF1-202ENST00000462276 KCNK3O14649 394 aa11.07□□□□□ -0.64
RTF1-202ENST00000462276 ENC1O14682 589 aa11.07□□□□□ -0.64
RTF1-202ENST00000462276 MOSPD3O75425 235 aa11.07□□□□□ -0.64
RTF1-202ENST00000462276 ATP1A1P05023 1023 aaKnown RBP11.07□□□□□ -0.64
RTF1-202ENST00000462276 TFE3P19532 575 aaPredicted RBP11.07□□□□□ -0.64
RTF1-202ENST00000462276 IL1R2P27930 398 aa11.07□□□□□ -0.64
RTF1-202ENST00000462276 CCR2P41597 374 aa11.07□□□□□ -0.64
RTF1-202ENST00000462276 MLLT6P55198 1093 aaPredicted RBP11.07□□□□□ -0.64
RTF1-202ENST00000462276 PITX1P78337 314 aaPredicted RBP11.07□□□□□ -0.64
RTF1-202ENST00000462276 RBM10P98175 930 aaKnown RBP11.07□□□□□ -0.64
RTF1-202ENST00000462276 TEAD2Q15562 447 aa11.07□□□□□ -0.64
RTF1-202ENST00000462276 PPP2R5EQ16537 467 aa11.07□□□□□ -0.64
RTF1-202ENST00000462276 TAZQ16635 292 aa11.07□□□□□ -0.64
RTF1-202ENST00000462276 DNTTIP2Q5QJE6 756 aaKnown RBP11.07□□□□□ -0.64
RTF1-202ENST00000462276 ZFYVE27Q5T4F4 411 aa11.07□□□□□ -0.64
RTF1-202ENST00000462276 HTR3DQ70Z44 454 aa11.07□□□□□ -0.64
RTF1-202ENST00000462276 DEFB123Q8N688 67 aa11.07□□□□□ -0.64
RTF1-202ENST00000462276 ARL14EPQ8N8R7 260 aaPredicted RBP11.07□□□□□ -0.64
RTF1-202ENST00000462276 MAB21L3Q8N8X9 362 aa11.07□□□□□ -0.64
RTF1-202ENST00000462276 MAIP1Q8WWC4 291 aa11.07□□□□□ -0.64
RTF1-202ENST00000462276 ALG3Q92685 438 aa11.07□□□□□ -0.64
RTF1-202ENST00000462276 KRT35Q92764 455 aa11.07□□□□□ -0.64
RTF1-202ENST00000462276 MSLNLQ96KJ4 702 aa11.07□□□□□ -0.64
RTF1-202ENST00000462276 OSBPL9Q96SU4 736 aa11.07□□□□□ -0.64
RTF1-202ENST00000462276 CDX2Q99626 313 aaPredicted RBP11.07□□□□□ -0.64
RTF1-202ENST00000462276 EPAS1Q99814 870 aa11.07□□□□□ -0.64
RTF1-202ENST00000462276 ZNF670Q9BS34 389 aa11.07□□□□□ -0.64
RTF1-202ENST00000462276 ADAM33Q9BZ11 813 aa11.07□□□□□ -0.64
RTF1-202ENST00000462276 SLITRK6Q9H5Y7 841 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms