RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 CD248Q9HCU0 757 aa19.81■□□□□ 0.76
VARS-220ENST00000461874 ABCC13Q9NSE7 274 aa19.81■□□□□ 0.76
VARS-220ENST00000461874 CHMP5Q9NZZ3 219 aa19.81■□□□□ 0.76
VARS-220ENST00000461874 SFMBT1Q9UHJ3 866 aa19.81■□□□□ 0.76
VARS-220ENST00000461874 MBD1Q9UIS9 605 aaPredicted RBP19.81■□□□□ 0.76
VARS-220ENST00000461874 RWDD2AQ9UIY3 292 aa19.81■□□□□ 0.76
VARS-220ENST00000461874 CNTN6Q9UQ52 1028 aa19.81■□□□□ 0.76
VARS-220ENST00000461874 HBS1LQ9Y450 684 aaKnown RBP19.81■□□□□ 0.76
VARS-220ENST00000461874 CYBBP04839 570 aa19.8■□□□□ 0.76
VARS-220ENST00000461874 GABRG2P18507 467 aa19.8■□□□□ 0.76
VARS-220ENST00000461874 HARS2P49590 506 aaKnown RBP19.8■□□□□ 0.76
VARS-220ENST00000461874 MFAP3P55082 362 aa19.8■□□□□ 0.76
VARS-220ENST00000461874 TCEAL6Q6IPX3 200 aa19.8■□□□□ 0.76
VARS-220ENST00000461874 FRMD1Q8N878 549 aa19.8■□□□□ 0.76
VARS-220ENST00000461874 IRGQQ8WZA9 623 aa19.8■□□□□ 0.76
VARS-220ENST00000461874 TCEAL3Q969E4 200 aa19.8■□□□□ 0.76
VARS-220ENST00000461874 HSFY1Q96LI6 401 aa19.8■□□□□ 0.76
VARS-220ENST00000461874 GFRA2O00451 464 aa19.79■□□□□ 0.76
VARS-220ENST00000461874 MAP3K13O43283 966 aa19.79■□□□□ 0.76
VARS-220ENST00000461874 DHPSP49366 369 aaPredicted RBP19.79■□□□□ 0.76
VARS-220ENST00000461874 STPG1Q5TH74 334 aa19.79■□□□□ 0.76
VARS-220ENST00000461874 KIAA1211LQ6NV74 962 aa19.79■□□□□ 0.76
VARS-220ENST00000461874 LPCAT2Q7L5N7 544 aa19.79■□□□□ 0.76
VARS-220ENST00000461874 CYP2U1Q7Z449 544 aa19.79■□□□□ 0.76
VARS-220ENST00000461874 IPO4Q8TEX9 1081 aaKnown RBP19.79■□□□□ 0.76
VARS-220ENST00000461874 PIWIL1Q96J94 861 aaKnown RBP19.79■□□□□ 0.76
VARS-220ENST00000461874 MED15Q96RN5 788 aa19.79■□□□□ 0.76
VARS-220ENST00000461874 UBE2TQ9NPD8 197 aaPredicted RBP19.79■□□□□ 0.76
VARS-220ENST00000461874 CACNA2D2Q9NY47 1150 aa19.79■□□□□ 0.76
VARS-220ENST00000461874 CLEC4EQ9ULY5 219 aa19.79■□□□□ 0.76
VARS-220ENST00000461874 GON4LQ3T8J9 2241 aa19.79■□□□□ 0.76
VARS-220ENST00000461874 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.78■□□□□ 0.76
VARS-220ENST00000461874 PIK3R2O00459 728 aa19.78■□□□□ 0.76
VARS-220ENST00000461874 TM4SF5O14894 197 aa19.78■□□□□ 0.76
VARS-220ENST00000461874 ZBTB24O43167 697 aaPredicted RBP19.78■□□□□ 0.76
VARS-220ENST00000461874 GEN1Q17RS7 908 aa19.78■□□□□ 0.76
VARS-220ENST00000461874 SPDYCQ5MJ68 293 aa19.78■□□□□ 0.76
VARS-220ENST00000461874 IL31Q6EBC2 164 aa19.78■□□□□ 0.76
VARS-220ENST00000461874 MSANTD2Q6P1R3 559 aa19.78■□□□□ 0.76
VARS-220ENST00000461874 TMEFF1Q8IYR6 380 aa19.78■□□□□ 0.76
VARS-220ENST00000461874 DDI1Q8WTU0 396 aa19.78■□□□□ 0.76
VARS-220ENST00000461874 SLC2A11Q9BYW1 496 aa19.78■□□□□ 0.76
VARS-220ENST00000461874 CALCOCO1Q9P1Z2 691 aa19.78■□□□□ 0.76
VARS-220ENST00000461874 STOML2Q9UJZ1 356 aa19.78■□□□□ 0.76
VARS-220ENST00000461874 WASH3PC4AMC7 463 aa19.77■□□□□ 0.76
VARS-220ENST00000461874 MSI1O43347 362 aaKnown RBP19.77■□□□□ 0.76
VARS-220ENST00000461874 FBXO21O94952 628 aa19.77■□□□□ 0.76
VARS-220ENST00000461874 KRT5P13647 590 aa19.77■□□□□ 0.76
VARS-220ENST00000461874 GPD2P43304 727 aa19.77■□□□□ 0.76
VARS-220ENST00000461874 RPL34P49207 117 aaKnown RBP19.77■□□□□ 0.76
VARS-220ENST00000461874 MPPE1Q53F39 396 aa19.77■□□□□ 0.76
VARS-220ENST00000461874 PPM1JQ5JR12 505 aa19.77■□□□□ 0.76
VARS-220ENST00000461874 ANKS1BQ7Z6G8 1248 aa19.77■□□□□ 0.76
VARS-220ENST00000461874 CLEC4CQ8WTT0 213 aa19.77■□□□□ 0.76
VARS-220ENST00000461874 DDX1Q92499 740 aaKnown RBP19.77■□□□□ 0.76
VARS-220ENST00000461874 PIGKQ92643 395 aa19.77■□□□□ 0.76
VARS-220ENST00000461874 CRACR2AQ9BSW2 395 aa19.77■□□□□ 0.76
VARS-220ENST00000461874 THAP10Q9P2Z0 257 aaPredicted RBP19.77■□□□□ 0.76
VARS-220ENST00000461874 RAD54BQ9Y620 910 aa19.77■□□□□ 0.76
VARS-220ENST00000461874 STON1Q9Y6Q2 735 aa19.77■□□□□ 0.76
VARS-220ENST00000461874 THADAQ6YHU6 1953 aa19.76■□□□□ 0.75
VARS-220ENST00000461874 KHNYNO15037 678 aaKnown RBP19.76■□□□□ 0.75
VARS-220ENST00000461874 NPC1O15118 1278 aa19.76■□□□□ 0.75
VARS-220ENST00000461874 LATS1O95835 1130 aa19.76■□□□□ 0.75
VARS-220ENST00000461874 LTFP02788 710 aa19.76■□□□□ 0.75
VARS-220ENST00000461874 NDUFV2P19404 249 aa19.76■□□□□ 0.75
VARS-220ENST00000461874 PTGER3P43115 390 aa19.76■□□□□ 0.75
VARS-220ENST00000461874 ZNF445P59923 1031 aa19.76■□□□□ 0.75
VARS-220ENST00000461874 ADGRF1Q5T601 910 aa19.76■□□□□ 0.75
VARS-220ENST00000461874 RNF43Q68DV7 783 aa19.76■□□□□ 0.75
VARS-220ENST00000461874 ENOSF1Q7L5Y1 443 aa19.76■□□□□ 0.75
VARS-220ENST00000461874 IRF2BP1Q8IU81 584 aa19.76■□□□□ 0.75
VARS-220ENST00000461874 CREBRFQ8IUR6 639 aa19.76■□□□□ 0.75
VARS-220ENST00000461874 MLKLQ8NB16 471 aa19.76■□□□□ 0.75
VARS-220ENST00000461874 UCMAQ8WVF2 138 aa19.76■□□□□ 0.75
VARS-220ENST00000461874 ERLEC1Q96DZ1 483 aa19.76■□□□□ 0.75
VARS-220ENST00000461874 EDEM2Q9BV94 578 aa19.76■□□□□ 0.75
VARS-220ENST00000461874 ELOVL2Q9NXB9 296 aa19.76■□□□□ 0.75
VARS-220ENST00000461874 LNP1A1A4G5 178 aa19.75■□□□□ 0.75
VARS-220ENST00000461874 PATE3B3GLJ2 98 aa19.75■□□□□ 0.75
VARS-220ENST00000461874 TSPAN3O60637 253 aa19.75■□□□□ 0.75
VARS-220ENST00000461874 ZNF217O75362 1048 aa19.75■□□□□ 0.75
VARS-220ENST00000461874 IGLV3-27P01718 113 aa19.75■□□□□ 0.75
VARS-220ENST00000461874 HOXD9P28356 352 aaPredicted RBP19.75■□□□□ 0.75
VARS-220ENST00000461874 ENPP2Q13822 863 aa19.75■□□□□ 0.75
VARS-220ENST00000461874 MEA1Q16626 185 aa19.75■□□□□ 0.75
VARS-220ENST00000461874 DENND1BQ6P3S1 775 aa19.75■□□□□ 0.75
VARS-220ENST00000461874 TRIM65Q6PJ69 517 aa19.75■□□□□ 0.75
VARS-220ENST00000461874 SLC36A4Q6YBV0 504 aa19.75■□□□□ 0.75
VARS-220ENST00000461874 ARMCX6Q7L4S7 300 aa19.75■□□□□ 0.75
VARS-220ENST00000461874 GOLGA1Q92805 767 aa19.75■□□□□ 0.75
VARS-220ENST00000461874 TMA16Q96EY4 203 aaKnown RBP19.75■□□□□ 0.75
VARS-220ENST00000461874 FAM81BQ96LP2 452 aa19.75■□□□□ 0.75
VARS-220ENST00000461874 MIS12Q9H081 205 aa19.75■□□□□ 0.75
VARS-220ENST00000461874 LAMA1P25391 3075 aa19.75■□□□□ 0.75
VARS-220ENST00000461874 TPRP12270 2363 aaKnown RBP19.75■□□□□ 0.75
VARS-220ENST00000461874 AP5Z1O43299 807 aa19.74■□□□□ 0.75
VARS-220ENST00000461874 TIMM44O43615 452 aa19.74■□□□□ 0.75
VARS-220ENST00000461874 FYNP06241 537 aa19.74■□□□□ 0.75
VARS-220ENST00000461874 SLC9A1P19634 815 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms