RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 KPNA1P52294 538 aaPredicted RBP11.74□□□□□ -0.53
SSBP1-202ENST00000461433 ZNF143P52747 638 aaPredicted RBP11.74□□□□□ -0.53
SSBP1-202ENST00000461433 ATXN1P54253 815 aaKnown RBP11.74□□□□□ -0.53
SSBP1-202ENST00000461433 TBX4P57082 545 aa11.74□□□□□ -0.53
SSBP1-202ENST00000461433 TDGQ13569 410 aa11.74□□□□□ -0.53
SSBP1-202ENST00000461433 TTC16Q8NEE8 873 aa11.74□□□□□ -0.53
SSBP1-202ENST00000461433 ANP32BQ92688 251 aaKnown RBP11.74□□□□□ -0.53
SSBP1-202ENST00000461433 PLD4Q96BZ4 506 aa11.74□□□□□ -0.53
SSBP1-202ENST00000461433 TRMT61BQ9BVS5 477 aaKnown RBP11.74□□□□□ -0.53
SSBP1-202ENST00000461433 NUP85Q9BW27 656 aa11.74□□□□□ -0.53
SSBP1-202ENST00000461433 MRPL47Q9HD33 250 aaKnown RBP11.74□□□□□ -0.53
SSBP1-202ENST00000461433 ANLNQ9NQW6 1124 aa11.74□□□□□ -0.53
SSBP1-202ENST00000461433 PIGVQ9NUD9 493 aa11.74□□□□□ -0.53
SSBP1-202ENST00000461433 DDIT4Q9NX09 232 aa11.74□□□□□ -0.53
SSBP1-202ENST00000461433 INTUQ9ULD6 942 aa11.74□□□□□ -0.53
SSBP1-202ENST00000461433 STAP1Q9ULZ2 295 aa11.74□□□□□ -0.53
SSBP1-202ENST00000461433 TFR2Q9UP52 801 aa11.74□□□□□ -0.53
SSBP1-202ENST00000461433 WNT6Q9Y6F9 365 aa11.74□□□□□ -0.53
SSBP1-202ENST00000461433 SCINQ9Y6U3 715 aa11.74□□□□□ -0.53
SSBP1-202ENST00000461433 TICRRQ7Z2Z1 1910 aa11.74□□□□□ -0.53
SSBP1-202ENST00000461433 MYOFQ9NZM1 2061 aa11.73□□□□□ -0.53
SSBP1-202ENST00000461433 KCNU1A8MYU2 1149 aa11.73□□□□□ -0.53
SSBP1-202ENST00000461433 I6L893 689 aaPredicted RBP11.73□□□□□ -0.53
SSBP1-202ENST00000461433 CHADO15335 359 aa11.73□□□□□ -0.53
SSBP1-202ENST00000461433 CCP110O43303 1012 aa11.73□□□□□ -0.53
SSBP1-202ENST00000461433 CORO1AP31146 461 aaKnown RBP11.73□□□□□ -0.53
SSBP1-202ENST00000461433 GDI1P31150 447 aa11.73□□□□□ -0.53
SSBP1-202ENST00000461433 SDC4P31431 198 aa11.73□□□□□ -0.53
SSBP1-202ENST00000461433 CXCR3P49682 368 aa11.73□□□□□ -0.53
SSBP1-202ENST00000461433 ATP11AP98196 1134 aa11.73□□□□□ -0.53
SSBP1-202ENST00000461433 NME3Q13232 169 aa11.73□□□□□ -0.53
SSBP1-202ENST00000461433 ARHGAP29Q52LW3 1261 aa11.73□□□□□ -0.53
SSBP1-202ENST00000461433 ZC3H12AQ5D1E8 599 aaKnown RBP11.73□□□□□ -0.53
SSBP1-202ENST00000461433 TRIM68Q6AZZ1 485 aa11.73□□□□□ -0.53
SSBP1-202ENST00000461433 DCUN1D2Q6PH85 259 aa11.73□□□□□ -0.53
SSBP1-202ENST00000461433 BBS7Q8IWZ6 715 aa11.73□□□□□ -0.53
SSBP1-202ENST00000461433 ADGRG2Q8IZP9 1017 aa11.73□□□□□ -0.53
SSBP1-202ENST00000461433 ARFGAP1Q8N6T3 406 aa11.73□□□□□ -0.53
SSBP1-202ENST00000461433 ACRBPQ8NEB7 543 aa11.73□□□□□ -0.53
SSBP1-202ENST00000461433 FNIP1Q8TF40 1166 aa11.73□□□□□ -0.53
SSBP1-202ENST00000461433 OSCP1Q8WVF1 389 aa11.73□□□□□ -0.53
SSBP1-202ENST00000461433 CTNNBL1Q8WYA6 563 aaPredicted RBP11.73□□□□□ -0.53
SSBP1-202ENST00000461433 UHRF1Q96T88 793 aaPredicted RBP11.73□□□□□ -0.53
SSBP1-202ENST00000461433 FAM204AQ9H8W3 233 aa11.73□□□□□ -0.53
SSBP1-202ENST00000461433 HPS4Q9NQG7 708 aa11.73□□□□□ -0.53
SSBP1-202ENST00000461433 AGO1Q9UL18 857 aaKnown RBP11.73□□□□□ -0.53
SSBP1-202ENST00000461433 SH3BP1Q9Y3L3 701 aa11.73□□□□□ -0.53
SSBP1-202ENST00000461433 COL4A3Q01955 1670 aa11.73□□□□□ -0.53
SSBP1-202ENST00000461433 A0A0C4DFX4 3053 aa11.73□□□□□ -0.53
SSBP1-202ENST00000461433 SYNJ2BP-COX16A0A087WUM0 186 aa11.72□□□□□ -0.53
SSBP1-202ENST00000461433 OTOL1A6NHN0 477 aaPredicted RBP11.72□□□□□ -0.53
SSBP1-202ENST00000461433 GBP1P32455 592 aa11.72□□□□□ -0.53
SSBP1-202ENST00000461433 HDAC4P56524 1084 aa11.72□□□□□ -0.53
SSBP1-202ENST00000461433 DEUP1Q05D60 604 aa11.72□□□□□ -0.53
SSBP1-202ENST00000461433 TNK2Q07912 1038 aa11.72□□□□□ -0.53
SSBP1-202ENST00000461433 TCEAL1Q15170 157 aa11.72□□□□□ -0.53
SSBP1-202ENST00000461433 SPA17Q15506 151 aa11.72□□□□□ -0.53
SSBP1-202ENST00000461433 EML3Q32P44 896 aa11.72□□□□□ -0.53
SSBP1-202ENST00000461433 STRADAQ7RTN6 431 aa11.72□□□□□ -0.53
SSBP1-202ENST00000461433 DENND1CQ8IV53 801 aa11.72□□□□□ -0.53
SSBP1-202ENST00000461433 FAM217AQ8IXS0 508 aa11.72□□□□□ -0.53
SSBP1-202ENST00000461433 CCDC112Q8NEF3 446 aa11.72□□□□□ -0.53
SSBP1-202ENST00000461433 SLC35G2Q8TBE7 412 aa11.72□□□□□ -0.53
SSBP1-202ENST00000461433 AZIN2Q96A70 460 aa11.72□□□□□ -0.53
SSBP1-202ENST00000461433 P2RY11Q96G91 374 aa11.72□□□□□ -0.53
SSBP1-202ENST00000461433 BTBD6Q96KE9 485 aa11.72□□□□□ -0.53
SSBP1-202ENST00000461433 PPP1R9BQ96SB3 815 aa11.72□□□□□ -0.53
SSBP1-202ENST00000461433 DESI2Q9BSY9 194 aa11.72□□□□□ -0.53
SSBP1-202ENST00000461433 CNPY3Q9BT09 278 aa11.72□□□□□ -0.53
SSBP1-202ENST00000461433 OSGEPQ9NPF4 335 aa11.72□□□□□ -0.53
SSBP1-202ENST00000461433 SLC2A4RGQ9NR83 387 aa11.72□□□□□ -0.53
SSBP1-202ENST00000461433 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.72□□□□□ -0.53
SSBP1-202ENST00000461433 THG1LQ9NWX6 298 aaKnown RBP11.72□□□□□ -0.53
SSBP1-202ENST00000461433 DUS2Q9NX74 493 aaKnown RBP11.72□□□□□ -0.53
SSBP1-202ENST00000461433 COX16Q9P0S2 106 aa11.72□□□□□ -0.53
SSBP1-202ENST00000461433 UVRAGQ9P2Y5 699 aa11.72□□□□□ -0.53
SSBP1-202ENST00000461433 XPO7Q9UIA9 1087 aaKnown RBP11.72□□□□□ -0.53
SSBP1-202ENST00000461433 MUTYHQ9UIF7 546 aa11.72□□□□□ -0.53
SSBP1-202ENST00000461433 STOML2Q9UJZ1 356 aa11.72□□□□□ -0.53
SSBP1-202ENST00000461433 DUSP12Q9UNI6 340 aa11.72□□□□□ -0.53
SSBP1-202ENST00000461433 SORCS3Q9UPU3 1222 aa11.72□□□□□ -0.53
SSBP1-202ENST00000461433 TRIOO75962 3097 aa11.72□□□□□ -0.53
SSBP1-202ENST00000461433 A0A0U1RQJ8 604 aa11.71□□□□□ -0.53
SSBP1-202ENST00000461433 GFRA2O00451 464 aa11.71□□□□□ -0.53
SSBP1-202ENST00000461433 ARHGAP6O43182 974 aa11.71□□□□□ -0.53
SSBP1-202ENST00000461433 MTA2O94776 668 aa11.71□□□□□ -0.53
SSBP1-202ENST00000461433 F9P00740 461 aa11.71□□□□□ -0.53
SSBP1-202ENST00000461433 SRFP11831 508 aa11.71□□□□□ -0.53
SSBP1-202ENST00000461433 ARSAP15289 507 aa11.71□□□□□ -0.53
SSBP1-202ENST00000461433 HARS2P49590 506 aaKnown RBP11.71□□□□□ -0.53
SSBP1-202ENST00000461433 PPP2R5DQ14738 602 aa11.71□□□□□ -0.53
SSBP1-202ENST00000461433 CDO1Q16878 200 aa11.71□□□□□ -0.53
SSBP1-202ENST00000461433 IER5LQ5T953 404 aa11.71□□□□□ -0.53
SSBP1-202ENST00000461433 NUGGCQ68CJ6 796 aa11.71□□□□□ -0.53
SSBP1-202ENST00000461433 NADSYN1Q6IA69 706 aa11.71□□□□□ -0.53
SSBP1-202ENST00000461433 CC2D1AQ6P1N0 951 aaPredicted RBP11.71□□□□□ -0.53
SSBP1-202ENST00000461433 UNC45BQ8IWX7 931 aa11.71□□□□□ -0.53
SSBP1-202ENST00000461433 YAF2Q8IY57 180 aa11.71□□□□□ -0.53
SSBP1-202ENST00000461433 ZNF564Q8TBZ8 553 aaPredicted RBP11.71□□□□□ -0.53
SSBP1-202ENST00000461433 FAM172AQ8WUF8 416 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms