RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 SERPINA13PQ6UXR4 307 aa18.11■□□□□ 0.49
TOP3A-202ENST00000461127 FOXD4L3Q6VB84 417 aaPredicted RBP18.11■□□□□ 0.49
TOP3A-202ENST00000461127 Q6ZNB5 142 aa18.11■□□□□ 0.49
TOP3A-202ENST00000461127 PAQR9Q6ZVX9 377 aa18.11■□□□□ 0.49
TOP3A-202ENST00000461127 CGRRF1Q99675 332 aa18.11■□□□□ 0.49
TOP3A-202ENST00000461127 FGFBP2Q9BYJ0 223 aa18.11■□□□□ 0.49
TOP3A-202ENST00000461127 NRSN2Q9GZP1 204 aa18.11■□□□□ 0.49
TOP3A-202ENST00000461127 LHX5Q9H2C1 402 aa18.11■□□□□ 0.49
TOP3A-202ENST00000461127 ELOVL2Q9NXB9 296 aa18.11■□□□□ 0.49
TOP3A-202ENST00000461127 CKAP5Q14008 2032 aa18.11■□□□□ 0.49
TOP3A-202ENST00000461127 NUMA1Q14980 2115 aa18.11■□□□□ 0.49
TOP3A-202ENST00000461127 FRMD3A2A2Y4 597 aa18.1■□□□□ 0.49
TOP3A-202ENST00000461127 ENC1O14682 589 aa18.1■□□□□ 0.49
TOP3A-202ENST00000461127 PAPSS1O43252 624 aaPredicted RBP18.1■□□□□ 0.49
TOP3A-202ENST00000461127 PHACTR2O75167 634 aa18.1■□□□□ 0.49
TOP3A-202ENST00000461127 PENKP01210 267 aaPredicted RBP18.1■□□□□ 0.49
TOP3A-202ENST00000461127 PGFP49763 221 aa18.1■□□□□ 0.49
TOP3A-202ENST00000461127 C21orf59P57076 290 aa18.1■□□□□ 0.49
TOP3A-202ENST00000461127 MYL6P60660 151 aa18.1■□□□□ 0.49
TOP3A-202ENST00000461127 IL9RQ01113 521 aa18.1■□□□□ 0.49
TOP3A-202ENST00000461127 C10orf120Q5SQS8 335 aa18.1■□□□□ 0.49
TOP3A-202ENST00000461127 USP49Q70CQ1 688 aa18.1■□□□□ 0.49
TOP3A-202ENST00000461127 TADA2BQ86TJ2 420 aa18.1■□□□□ 0.49
TOP3A-202ENST00000461127 CCDC65Q8IXS2 484 aa18.1■□□□□ 0.49
TOP3A-202ENST00000461127 FUKQ8N0W3 1084 aa18.1■□□□□ 0.49
TOP3A-202ENST00000461127 RDH13Q8NBN7 331 aa18.1■□□□□ 0.49
TOP3A-202ENST00000461127 OR2T3Q8NH03 318 aa18.1■□□□□ 0.49
TOP3A-202ENST00000461127 SNIP1Q8TAD8 396 aaKnown RBP18.1■□□□□ 0.49
TOP3A-202ENST00000461127 CCDC127Q96BQ5 260 aa18.1■□□□□ 0.49
TOP3A-202ENST00000461127 CIPCQ9C0C6 399 aa18.1■□□□□ 0.49
TOP3A-202ENST00000461127 SCML2Q9UQR0 700 aa18.1■□□□□ 0.49
TOP3A-202ENST00000461127 SLCO1B1Q9Y6L6 691 aa18.1■□□□□ 0.49
TOP3A-202ENST00000461127 TIMM44O43615 452 aa18.09■□□□□ 0.49
TOP3A-202ENST00000461127 RFPL3O75679 317 aa18.09■□□□□ 0.49
TOP3A-202ENST00000461127 LDOC1O95751 146 aaPredicted RBP18.09■□□□□ 0.49
TOP3A-202ENST00000461127 SEMA4FO95754 770 aa18.09■□□□□ 0.49
TOP3A-202ENST00000461127 CYBBP04839 570 aa18.09■□□□□ 0.49
TOP3A-202ENST00000461127 PRKCHP24723 683 aa18.09■□□□□ 0.49
TOP3A-202ENST00000461127 CD27P26842 260 aa18.09■□□□□ 0.49
TOP3A-202ENST00000461127 ACSL1P33121 698 aa18.09■□□□□ 0.49
TOP3A-202ENST00000461127 CTSKP43235 329 aa18.09■□□□□ 0.49
TOP3A-202ENST00000461127 BCAT1P54687 386 aa18.09■□□□□ 0.49
TOP3A-202ENST00000461127 MAP3K7CLP57077 242 aa18.09■□□□□ 0.49
TOP3A-202ENST00000461127 TARDBPQ13148 414 aaKnown RBP eCLIP18.09■□□□□ 0.491e-9■■■■■ 37.6
TOP3A-202ENST00000461127 RTP5Q14D33 572 aa18.09■□□□□ 0.49
TOP3A-202ENST00000461127 PSMD6Q15008 389 aa18.09■□□□□ 0.49
TOP3A-202ENST00000461127 FYB2Q5VWT5 728 aa18.09■□□□□ 0.49
TOP3A-202ENST00000461127 ZNF396Q96N95 335 aaPredicted RBP18.09■□□□□ 0.49
TOP3A-202ENST00000461127 SMOQ99835 787 aa18.09■□□□□ 0.49
TOP3A-202ENST00000461127 BTBD1Q9H0C5 482 aa18.09■□□□□ 0.49
TOP3A-202ENST00000461127 SMYD3Q9H7B4 428 aa18.09■□□□□ 0.49
TOP3A-202ENST00000461127 COL6A6A6NMZ7 2263 aa18.09■□□□□ 0.49
TOP3A-202ENST00000461127 COL5A1P20908 1838 aaPredicted RBP18.08■□□□□ 0.48
TOP3A-202ENST00000461127 STC2O76061 302 aa18.08■□□□□ 0.48
TOP3A-202ENST00000461127 FSBPO95073 299 aa18.08■□□□□ 0.48
TOP3A-202ENST00000461127 RARGP13631 454 aa18.08■□□□□ 0.48
TOP3A-202ENST00000461127 TRIM21P19474 475 aaKnown RBP18.08■□□□□ 0.48
TOP3A-202ENST00000461127 CYP24A1Q07973 514 aa18.08■□□□□ 0.48
TOP3A-202ENST00000461127 TAF1BQ53T94 588 aaPredicted RBP18.08■□□□□ 0.48
TOP3A-202ENST00000461127 ZNF667Q5HYK9 610 aa18.08■□□□□ 0.48
TOP3A-202ENST00000461127 LAYNQ6UX15 382 aa18.08■□□□□ 0.48
TOP3A-202ENST00000461127 CCDC73Q6ZRK6 1079 aa18.08■□□□□ 0.48
TOP3A-202ENST00000461127 ACOT1Q86TX2 421 aa18.08■□□□□ 0.48
TOP3A-202ENST00000461127 ZMIZ2Q8NF64 920 aa18.08■□□□□ 0.48
TOP3A-202ENST00000461127 FGF11Q92914 225 aa18.08■□□□□ 0.48
TOP3A-202ENST00000461127 SKA1Q96BD8 255 aa18.08■□□□□ 0.48
TOP3A-202ENST00000461127 BIRC7Q96CA5 298 aa18.08■□□□□ 0.48
TOP3A-202ENST00000461127 CNDP2Q96KP4 475 aaKnown RBP18.08■□□□□ 0.48
TOP3A-202ENST00000461127 GBP4Q96PP9 640 aa18.08■□□□□ 0.48
TOP3A-202ENST00000461127 ACE2Q9BYF1 805 aaPredicted RBP18.08■□□□□ 0.48
TOP3A-202ENST00000461127 DCLK3Q9C098 648 aa18.08■□□□□ 0.48
TOP3A-202ENST00000461127 XYLT2Q9H1B5 865 aa18.08■□□□□ 0.48
TOP3A-202ENST00000461127 CSNK1G1Q9HCP0 422 aa18.08■□□□□ 0.48
TOP3A-202ENST00000461127 MYO18BQ8IUG5 2567 aa18.08■□□□□ 0.48
TOP3A-202ENST00000461127 A0A1B0GTQ1 180 aa18.07■□□□□ 0.48
TOP3A-202ENST00000461127 ERVH48-1M5A8F1 160 aa18.07■□□□□ 0.48
TOP3A-202ENST00000461127 MDM4O15151 490 aa18.07■□□□□ 0.48
TOP3A-202ENST00000461127 CYP26A1O43174 497 aa18.07■□□□□ 0.48
TOP3A-202ENST00000461127 TSPAN3O60637 253 aa18.07■□□□□ 0.48
TOP3A-202ENST00000461127 BEST1O76090 585 aa18.07■□□□□ 0.48
TOP3A-202ENST00000461127 CCDC130P13994 396 aa18.07■□□□□ 0.48
TOP3A-202ENST00000461127 ABCB4P21439 1286 aa18.07■□□□□ 0.48
TOP3A-202ENST00000461127 ACTN2P35609 894 aa18.07■□□□□ 0.48
TOP3A-202ENST00000461127 PSEN1P49768 467 aa18.07■□□□□ 0.48
TOP3A-202ENST00000461127 CXADRP78310 365 aa18.07■□□□□ 0.48
TOP3A-202ENST00000461127 CAMK2GQ13555 558 aaPredicted RBP18.07■□□□□ 0.48
TOP3A-202ENST00000461127 ZNF699Q32M78 642 aa18.07■□□□□ 0.48
TOP3A-202ENST00000461127 HES3Q5TGS1 186 aa18.07■□□□□ 0.48
TOP3A-202ENST00000461127 FAM173BQ6P4H8 233 aa18.07■□□□□ 0.48
TOP3A-202ENST00000461127 SLC2A14Q8TDB8 520 aa18.07■□□□□ 0.48
TOP3A-202ENST00000461127 PIWIL1Q96J94 861 aaKnown RBP18.07■□□□□ 0.48
TOP3A-202ENST00000461127 CDK5RAP1Q96SZ6 601 aaKnown RBP18.07■□□□□ 0.48
TOP3A-202ENST00000461127 SLC2A11Q9BYW1 496 aa18.07■□□□□ 0.48
TOP3A-202ENST00000461127 FBRSQ9HAH7 460 aa18.07■□□□□ 0.48
TOP3A-202ENST00000461127 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.07■□□□□ 0.48
TOP3A-202ENST00000461127 OSER1Q9NX31 292 aa18.07■□□□□ 0.48
TOP3A-202ENST00000461127 PCDHA5Q9Y5H7 936 aa18.07■□□□□ 0.48
TOP3A-202ENST00000461127 SPTA1P02549 2419 aa18.06■□□□□ 0.48
TOP3A-202ENST00000461127 A0A1W2PQH9 124 aa18.06■□□□□ 0.48
TOP3A-202ENST00000461127 ITGAVP06756 1048 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms