RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 KLHL30Q0D2K2 578 aa11.56□□□□□ -0.56
APTX-209ENST00000460940 NNTQ13423 1086 aa11.56□□□□□ -0.56
APTX-209ENST00000460940 MLF2Q15773 248 aaPredicted RBP11.56□□□□□ -0.56
APTX-209ENST00000460940 ITPRIPL2Q3MIP1 535 aa11.56□□□□□ -0.56
APTX-209ENST00000460940 OR6B2Q6IFH4 312 aa11.56□□□□□ -0.56
APTX-209ENST00000460940 HTR3DQ70Z44 454 aa11.56□□□□□ -0.56
APTX-209ENST00000460940 CPA6Q8N4T0 437 aa11.56□□□□□ -0.56
APTX-209ENST00000460940 TTC16Q8NEE8 873 aa11.56□□□□□ -0.56
APTX-209ENST00000460940 CPA5Q8WXQ8 436 aa11.56□□□□□ -0.56
APTX-209ENST00000460940 ZFYVE19Q96K21 471 aa11.56□□□□□ -0.56
APTX-209ENST00000460940 SLC2A13Q96QE2 648 aa11.56□□□□□ -0.56
APTX-209ENST00000460940 EIF3CQ99613 913 aaKnown RBP11.56□□□□□ -0.56
APTX-209ENST00000460940 DCLK3Q9C098 648 aa11.56□□□□□ -0.56
APTX-209ENST00000460940 C8orf33Q9H7E9 229 aaPredicted RBP11.56□□□□□ -0.56
APTX-209ENST00000460940 ARFGAP3Q9NP61 516 aa11.56□□□□□ -0.56
APTX-209ENST00000460940 MED4Q9NPJ6 270 aa11.56□□□□□ -0.56
APTX-209ENST00000460940 GKN1Q9NS71 199 aa11.56□□□□□ -0.56
APTX-209ENST00000460940 SEPT11Q9NVA2 429 aaKnown RBP11.56□□□□□ -0.56
APTX-209ENST00000460940 TJP2Q9UDY2 1190 aa11.56□□□□□ -0.56
APTX-209ENST00000460940 NUDT5Q9UKK9 219 aa11.56□□□□□ -0.56
APTX-209ENST00000460940 ZNF510Q9Y2H8 683 aa11.56□□□□□ -0.56
APTX-209ENST00000460940 CAPN9O14815 690 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 GPR37L1O60883 481 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 DAB1O75553 588 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 CALB1P05937 261 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 NCAM1P13591 858 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 CASP14P31944 242 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 EML3Q32P44 896 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 SLC44A4Q53GD3 710 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 BMP8AQ7Z5Y6 402 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 VPS36Q86VN1 386 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 XYLT1Q86Y38 959 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 PHF13Q86YI8 300 aaPredicted RBP11.55□□□□□ -0.56
APTX-209ENST00000460940 SIX5Q8N196 739 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 SERPINB11Q96P15 392 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 PCDHB18PQ96TA0 734 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 FUT8Q9BYC5 575 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 CXorf56Q9H5V9 222 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 HAUS4Q9H6D7 363 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 HPS4Q9NQG7 708 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 WDR35Q9P2L0 1181 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 CA14Q9ULX7 337 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 WNT6Q9Y6F9 365 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 PIAS3Q9Y6X2 628 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 SLC12A8A0AV02 714 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 MAN2B1O00754 1011 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 STC2O76061 302 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 SEC31AO94979 1220 aaKnown RBP11.55□□□□□ -0.56
APTX-209ENST00000460940 SERPING1P05155 500 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 FYNP06241 537 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 IRF1P10914 325 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 TNFAIP3P21580 790 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 HNRNPH3P31942 346 aaKnown RBP11.55□□□□□ -0.56
APTX-209ENST00000460940 AMPD2Q01433 879 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 RING1Q06587 406 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 C1QBPQ07021 282 aaKnown RBP11.55□□□□□ -0.56
APTX-209ENST00000460940 NR1H3Q13133 447 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 RUNX3Q13761 415 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 TRIP4Q15650 581 aaPredicted RBP11.55□□□□□ -0.56
APTX-209ENST00000460940 ARCQ7LC44 396 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 RALGPS2Q86X27 583 aaPredicted RBP11.55□□□□□ -0.56
APTX-209ENST00000460940 DQX1Q8TE96 717 aaKnown RBP11.55□□□□□ -0.56
APTX-209ENST00000460940 CPLX3Q8WVH0 158 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 PIWIL1Q96J94 861 aaKnown RBP11.55□□□□□ -0.56
APTX-209ENST00000460940 DNAJC7Q99615 494 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 TACO1Q9BSH4 297 aaKnown RBP11.55□□□□□ -0.56
APTX-209ENST00000460940 FAM107BQ9H098 131 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 HEBP1Q9NRV9 189 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 RRN3Q9NYV6 651 aa11.55□□□□□ -0.56
APTX-209ENST00000460940 KRBA1A5PL33 1030 aa11.54□□□□□ -0.56
APTX-209ENST00000460940 MAP2K7O14733 419 aa11.54□□□□□ -0.56
APTX-209ENST00000460940 GREM1O60565 184 aa11.54□□□□□ -0.56
APTX-209ENST00000460940 LATS1O95835 1130 aa11.54□□□□□ -0.56
APTX-209ENST00000460940 ADH1CP00326 375 aa11.54□□□□□ -0.56
APTX-209ENST00000460940 ARSAP15289 507 aa11.54□□□□□ -0.56
APTX-209ENST00000460940 STARD6P59095 220 aa11.54□□□□□ -0.56
APTX-209ENST00000460940 SATB1Q01826 763 aa11.54□□□□□ -0.56
APTX-209ENST00000460940 TNK2Q07912 1038 aa11.54□□□□□ -0.56
APTX-209ENST00000460940 BRD3Q15059 726 aa11.54□□□□□ -0.56
APTX-209ENST00000460940 TDRD12Q587J7 1177 aaKnown RBP11.54□□□□□ -0.56
APTX-209ENST00000460940 TMEM31Q5JXX7 168 aa11.54□□□□□ -0.56
APTX-209ENST00000460940 FAM102AQ5T9C2 384 aaPredicted RBP11.54□□□□□ -0.56
APTX-209ENST00000460940 NUGGCQ68CJ6 796 aa11.54□□□□□ -0.56
APTX-209ENST00000460940 HGSNATQ68CP4 663 aa11.54□□□□□ -0.56
APTX-209ENST00000460940 TRIM68Q6AZZ1 485 aa11.54□□□□□ -0.56
APTX-209ENST00000460940 ZNF852Q6ZMS4 543 aa11.54□□□□□ -0.56
APTX-209ENST00000460940 Q6ZNB5 142 aa11.54□□□□□ -0.56
APTX-209ENST00000460940 TPRG1Q6ZUI0 275 aa11.54□□□□□ -0.56
APTX-209ENST00000460940 MON1BQ7L1V2 547 aa11.54□□□□□ -0.56
APTX-209ENST00000460940 ZNF571Q7Z3V5 609 aaPredicted RBP11.54□□□□□ -0.56
APTX-209ENST00000460940 CNGA4Q8IV77 575 aa11.54□□□□□ -0.56
APTX-209ENST00000460940 OLIG1Q8TAK6 271 aa11.54□□□□□ -0.56
APTX-209ENST00000460940 C11orf70Q9BRQ4 267 aa11.54□□□□□ -0.56
APTX-209ENST00000460940 DDX23Q9BUQ8 820 aaKnown RBP11.54□□□□□ -0.56
APTX-209ENST00000460940 MFSD1Q9H3U5 465 aa11.54□□□□□ -0.56
APTX-209ENST00000460940 EBF3Q9H4W6 596 aa11.54□□□□□ -0.56
APTX-209ENST00000460940 ECT2Q9H8V3 914 aa11.54□□□□□ -0.56
APTX-209ENST00000460940 GTSE1Q9NYZ3 720 aa11.54□□□□□ -0.56
APTX-209ENST00000460940 ADAM22Q9P0K1 906 aa11.54□□□□□ -0.56
APTX-209ENST00000460940 NAALADL1Q9UQQ1 740 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms