RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 METTL5Q9NRN9 209 aaKnown RBP23.41■■□□□ 1.34
C9orf3-209ENST00000460573 TLR6Q9Y2C9 796 aa23.41■■□□□ 1.34
C9orf3-209ENST00000460573 PI15O43692 258 aa23.4■■□□□ 1.34
C9orf3-209ENST00000460573 GREM1O60565 184 aa23.4■■□□□ 1.34
C9orf3-209ENST00000460573 TRUB2O95900 331 aaKnown RBP23.4■■□□□ 1.34
C9orf3-209ENST00000460573 IRF1P10914 325 aa23.4■■□□□ 1.34
C9orf3-209ENST00000460573 HARS2P49590 506 aaKnown RBP23.4■■□□□ 1.34
C9orf3-209ENST00000460573 CCDC122Q5T0U0 273 aa23.4■■□□□ 1.34
C9orf3-209ENST00000460573 NUGGCQ68CJ6 796 aa23.4■■□□□ 1.34
C9orf3-209ENST00000460573 DNAJC24Q6P3W2 148 aa23.4■■□□□ 1.34
C9orf3-209ENST00000460573 ATP2A3Q93084 1043 aa23.4■■□□□ 1.34
C9orf3-209ENST00000460573 NT5C3BQ969T7 300 aa23.4■■□□□ 1.34
C9orf3-209ENST00000460573 PARVAQ9NVD7 372 aa23.4■■□□□ 1.34
C9orf3-209ENST00000460573 WDFY4Q6ZS81 3184 aa23.4■■□□□ 1.34
C9orf3-209ENST00000460573 TCRBV5S1A1TA0A578 114 aa23.39■■□□□ 1.33
C9orf3-209ENST00000460573 ANKRD62A6NC57 917 aa23.39■■□□□ 1.33
C9orf3-209ENST00000460573 ARNTLO00327 626 aa23.39■■□□□ 1.33
C9orf3-209ENST00000460573 GFRA3O60609 400 aa23.39■■□□□ 1.33
C9orf3-209ENST00000460573 LATS1O95835 1130 aa23.39■■□□□ 1.33
C9orf3-209ENST00000460573 F9P00740 461 aa23.39■■□□□ 1.33
C9orf3-209ENST00000460573 IGLV3-25P01717 112 aa23.39■■□□□ 1.33
C9orf3-209ENST00000460573 IGLV3-27P01718 113 aa23.39■■□□□ 1.33
C9orf3-209ENST00000460573 RRM1P23921 792 aa23.39■■□□□ 1.33
C9orf3-209ENST00000460573 MLLT6P55198 1093 aaPredicted RBP23.39■■□□□ 1.33
C9orf3-209ENST00000460573 TBX4P57082 545 aa23.39■■□□□ 1.33
C9orf3-209ENST00000460573 SLC25A52Q3SY17 297 aa23.39■■□□□ 1.33
C9orf3-209ENST00000460573 PLEKHA7Q6IQ23 1121 aa23.39■■□□□ 1.33
C9orf3-209ENST00000460573 TAC4Q86UU9 113 aa23.39■■□□□ 1.33
C9orf3-209ENST00000460573 CCDC105Q8IYK2 499 aa23.39■■□□□ 1.33
C9orf3-209ENST00000460573 DTWD2Q8NBA8 298 aa23.39■■□□□ 1.33
C9orf3-209ENST00000460573 PGAP3Q96FM1 320 aaPredicted RBP23.39■■□□□ 1.33
C9orf3-209ENST00000460573 NPY6RQ99463 290 aa23.39■■□□□ 1.33
C9orf3-209ENST00000460573 NENFQ9UMX5 172 aa23.39■■□□□ 1.33
C9orf3-209ENST00000460573 SIT1Q9Y3P8 196 aa23.39■■□□□ 1.33
C9orf3-209ENST00000460573 SCINQ9Y6U3 715 aa23.39■■□□□ 1.33
C9orf3-209ENST00000460573 KIF26AQ9ULI4 1882 aaPredicted RBP23.39■■□□□ 1.33
C9orf3-209ENST00000460573 PIEZO1Q92508 2521 aa23.38■■□□□ 1.33
C9orf3-209ENST00000460573 IRAK2O43187 625 aa23.38■■□□□ 1.33
C9orf3-209ENST00000460573 MSI1O43347 362 aaKnown RBP23.38■■□□□ 1.33
C9orf3-209ENST00000460573 NFATC1O95644 943 aa23.38■■□□□ 1.33
C9orf3-209ENST00000460573 HMBSP08397 361 aa23.38■■□□□ 1.33
C9orf3-209ENST00000460573 SLC2A3P11169 496 aa23.38■■□□□ 1.33
C9orf3-209ENST00000460573 GLULP15104 373 aa23.38■■□□□ 1.33
C9orf3-209ENST00000460573 FECHP22830 423 aa23.38■■□□□ 1.33
C9orf3-209ENST00000460573 FLT3P36888 993 aa23.38■■□□□ 1.33
C9orf3-209ENST00000460573 GFPT1Q06210 699 aaPredicted RBP23.38■■□□□ 1.33
C9orf3-209ENST00000460573 NR1H3Q13133 447 aa23.38■■□□□ 1.33
C9orf3-209ENST00000460573 MTA1Q13330 715 aa23.38■■□□□ 1.33
C9orf3-209ENST00000460573 EIF4EBP2Q13542 120 aaPredicted RBP23.38■■□□□ 1.33
C9orf3-209ENST00000460573 RUNX3Q13761 415 aa23.38■■□□□ 1.33
C9orf3-209ENST00000460573 EML3Q32P44 896 aa23.38■■□□□ 1.33
C9orf3-209ENST00000460573 Q6ZNB5 142 aa23.38■■□□□ 1.33
C9orf3-209ENST00000460573 PHLDB2Q86SQ0 1253 aa23.38■■□□□ 1.33
C9orf3-209ENST00000460573 TMTC1Q8IUR5 882 aa23.38■■□□□ 1.33
C9orf3-209ENST00000460573 CCDC170Q8IYT3 715 aa23.38■■□□□ 1.33
C9orf3-209ENST00000460573 ADGRG2Q8IZP9 1017 aa23.38■■□□□ 1.33
C9orf3-209ENST00000460573 SPC24Q8NBT2 197 aa23.38■■□□□ 1.33
C9orf3-209ENST00000460573 AZIN2Q96A70 460 aa23.38■■□□□ 1.33
C9orf3-209ENST00000460573 ZNF653Q96CK0 615 aa23.38■■□□□ 1.33
C9orf3-209ENST00000460573 ZFYVE19Q96K21 471 aa23.38■■□□□ 1.33
C9orf3-209ENST00000460573 FAM204AQ9H8W3 233 aa23.38■■□□□ 1.33
C9orf3-209ENST00000460573 MRPL47Q9HD33 250 aaKnown RBP23.38■■□□□ 1.33
C9orf3-209ENST00000460573 CNOT8Q9UFF9 292 aaKnown RBP23.38■■□□□ 1.33
C9orf3-209ENST00000460573 WNT6Q9Y6F9 365 aa23.38■■□□□ 1.33
C9orf3-209ENST00000460573 PDGFRAP16234 1089 aa23.37■■□□□ 1.33
C9orf3-209ENST00000460573 CORO1AP31146 461 aaKnown RBP23.37■■□□□ 1.33
C9orf3-209ENST00000460573 SDC4P31431 198 aa23.37■■□□□ 1.33
C9orf3-209ENST00000460573 CHKAP35790 457 aa23.37■■□□□ 1.33
C9orf3-209ENST00000460573 GSDMDP57764 484 aa23.37■■□□□ 1.33
C9orf3-209ENST00000460573 ITPRIPL2Q3MIP1 535 aa23.37■■□□□ 1.33
C9orf3-209ENST00000460573 PPP1R15BQ5SWA1 713 aa23.37■■□□□ 1.33
C9orf3-209ENST00000460573 DCUN1D2Q6PH85 259 aa23.37■■□□□ 1.33
C9orf3-209ENST00000460573 SND1Q7KZF4 910 aaKnown RBP eCLIP23.37■■□□□ 1.33
C9orf3-209ENST00000460573 CPA6Q8N4T0 437 aa23.37■■□□□ 1.33
C9orf3-209ENST00000460573 ADAM32Q8TC27 787 aa23.37■■□□□ 1.33
C9orf3-209ENST00000460573 WBP2Q969T9 261 aa23.37■■□□□ 1.33
C9orf3-209ENST00000460573 MSANTD3Q96H12 275 aa23.37■■□□□ 1.33
C9orf3-209ENST00000460573 SLC39A13Q96H72 371 aa23.37■■□□□ 1.33
C9orf3-209ENST00000460573 LINC00597Q9H2U6 94 aa23.37■■□□□ 1.33
C9orf3-209ENST00000460573 EBF3Q9H4W6 596 aa23.37■■□□□ 1.33
C9orf3-209ENST00000460573 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.37■■□□□ 1.33
C9orf3-209ENST00000460573 DDIT4Q9NX09 232 aa23.37■■□□□ 1.33
C9orf3-209ENST00000460573 MIA3Q5JRA6 1907 aa23.37■■□□□ 1.33
C9orf3-209ENST00000460573 C2CD4BA6NLJ0 364 aa23.36■■□□□ 1.33
C9orf3-209ENST00000460573 M0QYT0 321 aa23.36■■□□□ 1.33
C9orf3-209ENST00000460573 DESP17661 470 aa23.36■■□□□ 1.33
C9orf3-209ENST00000460573 PTPN9P43378 593 aa23.36■■□□□ 1.33
C9orf3-209ENST00000460573 SULT1E1P49888 294 aa23.36■■□□□ 1.33
C9orf3-209ENST00000460573 AMPD2Q01433 879 aa23.36■■□□□ 1.33
C9orf3-209ENST00000460573 MAMLD1Q13495 774 aa23.36■■□□□ 1.33
C9orf3-209ENST00000460573 ANGPT1Q15389 498 aa23.36■■□□□ 1.33
C9orf3-209ENST00000460573 MLF2Q15773 248 aaPredicted RBP23.36■■□□□ 1.33
C9orf3-209ENST00000460573 SLC44A4Q53GD3 710 aa23.36■■□□□ 1.33
C9orf3-209ENST00000460573 C10orf76Q5T2E6 689 aa23.36■■□□□ 1.33
C9orf3-209ENST00000460573 C1orf228Q6PIY5 440 aa23.36■■□□□ 1.33
C9orf3-209ENST00000460573 BBS7Q8IWZ6 715 aa23.36■■□□□ 1.33
C9orf3-209ENST00000460573 RXFP2Q8WXD0 754 aa23.36■■□□□ 1.33
C9orf3-209ENST00000460573 FCRL2Q96LA5 508 aaPredicted RBP23.36■■□□□ 1.33
C9orf3-209ENST00000460573 C8orf33Q9H7E9 229 aaPredicted RBP23.36■■□□□ 1.33
C9orf3-209ENST00000460573 ECT2Q9H8V3 914 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms