RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 TOP1MTQ969P6 601 aa8.35□□□□□ -1.07
SFPQ-202ENST00000460428 TLCD1Q96CP7 247 aa8.35□□□□□ -1.07
SFPQ-202ENST00000460428 ZNF689Q96CS4 500 aaPredicted RBP8.35□□□□□ -1.07
SFPQ-202ENST00000460428 SCLYQ96I15 445 aa8.35□□□□□ -1.07
SFPQ-202ENST00000460428 TTC25Q96NG3 672 aa8.35□□□□□ -1.07
SFPQ-202ENST00000460428 HAPLN3Q96S86 360 aa8.35□□□□□ -1.07
SFPQ-202ENST00000460428 RHOBTB2Q9BYZ6 727 aa8.35□□□□□ -1.07
SFPQ-202ENST00000460428 GPR62Q9BZJ7 368 aa8.35□□□□□ -1.07
SFPQ-202ENST00000460428 BRD8Q9H0E9 1235 aa8.35□□□□□ -1.07
SFPQ-202ENST00000460428 SMOC2Q9H3U7 446 aa8.35□□□□□ -1.07
SFPQ-202ENST00000460428 FBXO44Q9H4M3 255 aa8.35□□□□□ -1.07
SFPQ-202ENST00000460428 RC3H2Q9HBD1 1191 aaKnown RBP8.35□□□□□ -1.07
SFPQ-202ENST00000460428 ARHGEF4Q9NR80 690 aa8.35□□□□□ -1.07
SFPQ-202ENST00000460428 GPATCH2LQ9NWQ4 482 aa8.35□□□□□ -1.07
SFPQ-202ENST00000460428 GOLGA6AQ9NYA3 693 aa8.35□□□□□ -1.07
SFPQ-202ENST00000460428 CLIC5Q9NZA1 410 aa8.35□□□□□ -1.07
SFPQ-202ENST00000460428 VPS18Q9P253 973 aa8.35□□□□□ -1.07
SFPQ-202ENST00000460428 PAK5Q9P286 719 aa8.35□□□□□ -1.07
SFPQ-202ENST00000460428 FETUBQ9UGM5 382 aa8.35□□□□□ -1.07
SFPQ-202ENST00000460428 PRG3Q9Y2Y8 225 aaPredicted RBP8.35□□□□□ -1.07
SFPQ-202ENST00000460428 PCDHB5Q9Y5E4 795 aa8.35□□□□□ -1.07
SFPQ-202ENST00000460428 TET1Q8NFU7 2136 aa8.35□□□□□ -1.07
SFPQ-202ENST00000460428 HTTP42858 3142 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 MICAL3Q7RTP6 2002 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 SRRM3A6NNA2 597 aaPredicted RBP8.34□□□□□ -1.07
SFPQ-202ENST00000460428 I6L893 689 aaPredicted RBP8.34□□□□□ -1.07
SFPQ-202ENST00000460428 KIAA0355O15063 1070 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 POLR3GO15318 223 aaPredicted RBP8.34□□□□□ -1.07
SFPQ-202ENST00000460428 NCAM2O15394 837 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 IRAK2O43187 625 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 SHOX2O60902 331 aaPredicted RBP8.34□□□□□ -1.07
SFPQ-202ENST00000460428 CLTBP09497 229 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 ZDHHC11BP0C7U3 371 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 ZSCAN5DPP0CG00 497 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 NCAM1P13591 858 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 GOT1P17174 413 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 AMPD1P23109 780 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 HOXC13P31276 330 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 GRIK1P39086 918 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 GATMP50440 423 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 SLC5A3P53794 718 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 YWHAGP61981 247 aaKnown RBP eCLIP8.34□□□□□ -1.07
SFPQ-202ENST00000460428 DYNLT1P63172 113 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 KCNJ11Q14654 390 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 CTXN3Q4LDR2 81 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 SLC39A12Q504Y0 691 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 PPP6R3Q5H9R7 873 aaPredicted RBP8.34□□□□□ -1.07
SFPQ-202ENST00000460428 ARTNQ5T4W7 220 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 ACBD5Q5T8D3 534 aaPredicted RBP8.34□□□□□ -1.07
SFPQ-202ENST00000460428 SLC8B1Q6J4K2 584 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 DARS2Q6PI48 645 aaKnown RBP8.34□□□□□ -1.07
SFPQ-202ENST00000460428 NPNTQ6UXI9 565 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 KDM7AQ6ZMT4 941 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 RFX8Q6ZV50 586 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 SCD5Q86SK9 330 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 PRUNE1Q86TP1 453 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 DNAJC5GQ8N7S2 189 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 MCUQ8NE86 351 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 FAM76AQ8TAV0 307 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 DQX1Q8TE96 717 aaKnown RBP8.34□□□□□ -1.07
SFPQ-202ENST00000460428 RNF139Q8WU17 664 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 DPF3Q92784 378 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 SLC39A13Q96H72 371 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 C1orf74Q96LT6 269 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 SERPINB12Q96P63 405 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 QKIQ96PU8 341 aaKnown RBP eCLIP8.34□□□□□ -1.077e-7■■□□□ 12
SFPQ-202ENST00000460428 RBM15Q96T37 977 aaKnown RBP eCLIP8.34□□□□□ -1.076e-8■□□□□ 10.5
SFPQ-202ENST00000460428 TTPALQ9BTX7 342 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 MAGEB5Q9BZ81 275 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 CWH43Q9H720 699 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 FAM204AQ9H8W3 233 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 PPCSQ9HAB8 311 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 ANLNQ9NQW6 1124 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 EURLQ9NYK6 297 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 NINJ2Q9NZG7 142 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 DTLQ9NZJ0 730 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.34□□□□□ -1.07
SFPQ-202ENST00000460428 MTRRQ9UBK8 725 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 SCN5AQ14524 2016 aa8.34□□□□□ -1.07
SFPQ-202ENST00000460428 MTMR11A4FU01 709 aa8.33□□□□□ -1.08
SFPQ-202ENST00000460428 GOLGA6L10A6NI86 522 aa8.33□□□□□ -1.08
SFPQ-202ENST00000460428 TBKBP1A7MCY6 615 aa8.33□□□□□ -1.08
SFPQ-202ENST00000460428 KCNU1A8MYU2 1149 aa8.33□□□□□ -1.08
SFPQ-202ENST00000460428 H7C0C1 242 aa8.33□□□□□ -1.08
SFPQ-202ENST00000460428 RTN3O95197 1032 aaPredicted RBP8.33□□□□□ -1.08
SFPQ-202ENST00000460428 VNN2O95498 520 aa8.33□□□□□ -1.08
SFPQ-202ENST00000460428 TIMP1P01033 207 aa8.33□□□□□ -1.08
SFPQ-202ENST00000460428 IFNB1P01574 187 aa8.33□□□□□ -1.08
SFPQ-202ENST00000460428 HAPLN1P10915 354 aaPredicted RBP8.33□□□□□ -1.08
SFPQ-202ENST00000460428 TPSB2P20231 275 aa8.33□□□□□ -1.08
SFPQ-202ENST00000460428 RBL1P28749 1068 aa8.33□□□□□ -1.08
SFPQ-202ENST00000460428 MAGEA4P43358 317 aa8.33□□□□□ -1.08
SFPQ-202ENST00000460428 ATP5OP48047 213 aa8.33□□□□□ -1.08
SFPQ-202ENST00000460428 CTCFP49711 727 aaPredicted RBP8.33□□□□□ -1.08
SFPQ-202ENST00000460428 RABGGTBP53611 331 aa8.33□□□□□ -1.08
SFPQ-202ENST00000460428 ATN1P54259 1190 aaPredicted RBP8.33□□□□□ -1.08
SFPQ-202ENST00000460428 CCL23P55773 120 aa8.33□□□□□ -1.08
SFPQ-202ENST00000460428 GBE1Q04446 702 aa8.33□□□□□ -1.08
SFPQ-202ENST00000460428 MTA1Q13330 715 aa8.33□□□□□ -1.08
SFPQ-202ENST00000460428 STAT4Q14765 748 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms