RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 IL1R2P27930 398 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 TAF11Q15544 211 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 SMTNL2Q2TAL5 461 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 DCAF12L1Q5VU92 463 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 PM20D1Q6GTS8 502 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 ZCCHC8Q6NZY4 707 aaKnown RBP10.75□□□□□ -0.69
USP39-210ENST00000459775 ANKS1BQ7Z6G8 1248 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 ARL6IP6Q8N6S5 226 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 GABPB2Q8TAK5 448 aaPredicted RBP10.75□□□□□ -0.69
USP39-210ENST00000459775 CAPZA3Q96KX2 299 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 TBCBQ99426 244 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 NAPGQ99747 312 aaPredicted RBP10.75□□□□□ -0.69
USP39-210ENST00000459775 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.75□□□□□ -0.69
USP39-210ENST00000459775 UBXN6Q9BZV1 441 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 EPHX3Q9H6B9 360 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 NGRNQ9NPE2 291 aaKnown RBP10.75□□□□□ -0.69
USP39-210ENST00000459775 CNGB3Q9NQW8 809 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 GPATCH2LQ9NWQ4 482 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 INSL5Q9Y5Q6 135 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 CTAGE9A4FU28 777 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 CCL16O15467 120 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 DDX3YO15523 660 aaKnown RBP10.75□□□□□ -0.69
USP39-210ENST00000459775 LRCH4O75427 683 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 LTFP02788 710 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 ADH1AP07327 375 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 HMGA1P17096 107 aaKnown RBP10.75□□□□□ -0.69
USP39-210ENST00000459775 YWHAQP27348 245 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 ELF1P32519 619 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 KCNQ1P51787 676 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 CLCN4P51793 760 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 YWHAGP61981 247 aaKnown RBP eCLIP10.75□□□□□ -0.69
USP39-210ENST00000459775 NME3Q13232 169 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 PLD1Q13393 1074 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 TPGS2Q68CL5 300 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 PPP1R2P3Q6NXS1 205 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 SCYL2Q6P3W7 929 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 RBM12BQ8IXT5 1001 aaKnown RBP10.75□□□□□ -0.69
USP39-210ENST00000459775 C12orf76Q8N812 135 aaPredicted RBP10.75□□□□□ -0.69
USP39-210ENST00000459775 KREMEN2Q8NCW0 462 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 LRRN4CLQ8ND94 238 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 FAM172AQ8WUF8 416 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 PEBP4Q96S96 227 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 ZWILCHQ9H900 591 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 ZNF334Q9HCZ1 680 aaPredicted RBP10.75□□□□□ -0.69
USP39-210ENST00000459775 CYLDQ9NQC7 956 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.75□□□□□ -0.69
USP39-210ENST00000459775 HCFC1R1Q9NWW0 138 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 CLIC5Q9NZA1 410 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 CDH22Q9UJ99 828 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 AMFRQ9UKV5 643 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 RWDD3Q9Y3V2 267 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 JRKLQ9Y4A0 524 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 IRAK3Q9Y616 596 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 PTPRDP23468 1912 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 KCNK3O14649 394 aa10.74□□□□□ -0.69
USP39-210ENST00000459775 MSI1O43347 362 aaKnown RBP10.74□□□□□ -0.69
USP39-210ENST00000459775 CLASP2O75122 1294 aaKnown RBP10.74□□□□□ -0.69
USP39-210ENST00000459775 GLUD1P00367 558 aa10.74□□□□□ -0.69
USP39-210ENST00000459775 C8AP07357 584 aa10.74□□□□□ -0.69
USP39-210ENST00000459775 GJA1P17302 382 aa10.74□□□□□ -0.69
USP39-210ENST00000459775 ALDH1A3P47895 512 aa10.74□□□□□ -0.69
USP39-210ENST00000459775 TUFMP49411 452 aaKnown RBP10.74□□□□□ -0.69
USP39-210ENST00000459775 ZNF143P52747 638 aaPredicted RBP10.74□□□□□ -0.69
USP39-210ENST00000459775 AMPD2Q01433 879 aa10.74□□□□□ -0.69
USP39-210ENST00000459775 TFF2Q03403 129 aa10.74□□□□□ -0.69
USP39-210ENST00000459775 GABPB1Q06547 395 aaPredicted RBP10.74□□□□□ -0.69
USP39-210ENST00000459775 IFI16Q16666 785 aaKnown RBP10.74□□□□□ -0.69
USP39-210ENST00000459775 EFHC1Q5JVL4 640 aa10.74□□□□□ -0.69
USP39-210ENST00000459775 AGAP9Q5VTM2 703 aa10.74□□□□□ -0.69
USP39-210ENST00000459775 C11orf63Q6NUN7 778 aa10.74□□□□□ -0.69
USP39-210ENST00000459775 DNAJB7Q7Z6W7 309 aaPredicted RBP10.74□□□□□ -0.69
USP39-210ENST00000459775 SUGP1Q8IWZ8 645 aaKnown RBP10.74□□□□□ -0.69
USP39-210ENST00000459775 TCEAL8Q8IYN2 117 aa10.74□□□□□ -0.69
USP39-210ENST00000459775 CD101Q93033 1021 aa10.74□□□□□ -0.69
USP39-210ENST00000459775 FBXO32Q969P5 355 aa10.74□□□□□ -0.69
USP39-210ENST00000459775 APOL5Q9BWW9 433 aa10.74□□□□□ -0.69
USP39-210ENST00000459775 EMILIN2Q9BXX0 1053 aa10.74□□□□□ -0.69
USP39-210ENST00000459775 OXCT2Q9BYC2 517 aaPredicted RBP10.74□□□□□ -0.69
USP39-210ENST00000459775 IGFLR1Q9H665 355 aa10.74□□□□□ -0.69
USP39-210ENST00000459775 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.74□□□□□ -0.69
USP39-210ENST00000459775 I6L893 689 aaPredicted RBP10.73□□□□□ -0.69
USP39-210ENST00000459775 M0QYT0 321 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 CAPN9O14815 690 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 HSF2BPO75031 334 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 FBXO21O94952 628 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 IL4RP24394 825 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 MIPP30301 263 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 SDC4P31431 198 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 MATKP42679 507 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 NRIP1P48552 1158 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 SULT1E1P49888 294 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 HDAC4P56524 1084 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 RPL10AP62906 217 aaKnown RBP10.73□□□□□ -0.69
USP39-210ENST00000459775 RPS6KA1Q15418 735 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 JAZF1Q86VZ6 243 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 FAM131BQ86XD5 332 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 ZDHHC17Q8IUH5 632 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 VN1R2Q8NFZ6 395 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 KIF18AQ8NI77 898 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 C2orf15Q8WU43 125 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms