RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 PCDHGC3Q9UN70 934 aa18.29■□□□□ 0.52
SCARNA2-201ENST00000458748 RALGAPA1Q6GYQ0 2036 aa18.28■□□□□ 0.52
SCARNA2-201ENST00000458748 BECN2A8MW95 431 aa18.28■□□□□ 0.52
SCARNA2-201ENST00000458748 KLF8O95600 359 aaPredicted RBP18.28■□□□□ 0.52
SCARNA2-201ENST00000458748 KLKB1P03952 638 aa18.28■□□□□ 0.52
SCARNA2-201ENST00000458748 CHRM1P11229 460 aaPredicted RBP18.28■□□□□ 0.52
SCARNA2-201ENST00000458748 NCAM1P13591 858 aa18.28■□□□□ 0.52
SCARNA2-201ENST00000458748 TIE1P35590 1138 aa18.28■□□□□ 0.52
SCARNA2-201ENST00000458748 MYL5Q02045 173 aa18.28■□□□□ 0.52
SCARNA2-201ENST00000458748 RING1Q06587 406 aa18.28■□□□□ 0.52
SCARNA2-201ENST00000458748 MESP2Q0VG99 397 aa18.28■□□□□ 0.52
SCARNA2-201ENST00000458748 CRY1Q16526 586 aa18.28■□□□□ 0.52
SCARNA2-201ENST00000458748 MPPE1Q53F39 396 aa18.28■□□□□ 0.52
SCARNA2-201ENST00000458748 TMEM110Q86TL2 294 aa18.28■□□□□ 0.52
SCARNA2-201ENST00000458748 CCDC33Q8N5R6 958 aa18.28■□□□□ 0.52
SCARNA2-201ENST00000458748 FAM160A2Q8N612 972 aaPredicted RBP18.28■□□□□ 0.52
SCARNA2-201ENST00000458748 ALLCQ8N6M5 410 aa18.28■□□□□ 0.52
SCARNA2-201ENST00000458748 ZNF513Q8N8E2 541 aaPredicted RBP18.28■□□□□ 0.52
SCARNA2-201ENST00000458748 IL17RCQ8NAC3 791 aa18.28■□□□□ 0.52
SCARNA2-201ENST00000458748 TXNDC5Q8NBS9 432 aaKnown RBP18.28■□□□□ 0.52
SCARNA2-201ENST00000458748 DDI1Q8WTU0 396 aa18.28■□□□□ 0.52
SCARNA2-201ENST00000458748 ZC3H10Q96K80 434 aaKnown RBP18.28■□□□□ 0.52
SCARNA2-201ENST00000458748 SLC4A5Q9BY07 1137 aa18.28■□□□□ 0.52
SCARNA2-201ENST00000458748 SLC2A11Q9BYW1 496 aa18.28■□□□□ 0.52
SCARNA2-201ENST00000458748 LHX5Q9H2C1 402 aa18.28■□□□□ 0.52
SCARNA2-201ENST00000458748 SIX2Q9NPC8 291 aa18.28■□□□□ 0.52
SCARNA2-201ENST00000458748 POLR3BQ9NW08 1133 aaPredicted RBP18.28■□□□□ 0.52
SCARNA2-201ENST00000458748 SFMBT1Q9UHJ3 866 aa18.28■□□□□ 0.52
SCARNA2-201ENST00000458748 STARD13Q9Y3M8 1113 aa18.28■□□□□ 0.52
SCARNA2-201ENST00000458748 DAAM1Q9Y4D1 1078 aa18.28■□□□□ 0.52
SCARNA2-201ENST00000458748 PRR5-ARHGAP8B1AHC4 643 aa18.27■□□□□ 0.52
SCARNA2-201ENST00000458748 FOXD2O60548 495 aaPredicted RBP18.27■□□□□ 0.52
SCARNA2-201ENST00000458748 CALCAP01258 141 aa18.27■□□□□ 0.52
SCARNA2-201ENST00000458748 CDK11BP21127 795 aaKnown RBP18.27■□□□□ 0.52
SCARNA2-201ENST00000458748 SDHBP21912 280 aa18.27■□□□□ 0.52
SCARNA2-201ENST00000458748 SLC11A2P49281 568 aa18.27■□□□□ 0.52
SCARNA2-201ENST00000458748 ARHGAP8P85298 464 aa18.27■□□□□ 0.52
SCARNA2-201ENST00000458748 LMNB2Q03252 620 aa18.27■□□□□ 0.52
SCARNA2-201ENST00000458748 SPEM2Q0P670 501 aa18.27■□□□□ 0.52
SCARNA2-201ENST00000458748 PDCLQ13371 301 aa18.27■□□□□ 0.52
SCARNA2-201ENST00000458748 USP39Q53GS9 565 aaKnown RBP18.27■□□□□ 0.52
SCARNA2-201ENST00000458748 KLHDC7AQ5VTJ3 777 aa18.27■□□□□ 0.52
SCARNA2-201ENST00000458748 CDKAL1Q5VV42 579 aa18.27■□□□□ 0.52
SCARNA2-201ENST00000458748 RASSF3Q86WH2 238 aa18.27■□□□□ 0.52
SCARNA2-201ENST00000458748 FAM71AQ8IYT1 594 aa18.27■□□□□ 0.52
SCARNA2-201ENST00000458748 IPO4Q8TEX9 1081 aaKnown RBP18.27■□□□□ 0.52
SCARNA2-201ENST00000458748 BHMTQ93088 406 aa18.27■□□□□ 0.52
SCARNA2-201ENST00000458748 LSM14BQ9BX40 385 aaKnown RBP18.27■□□□□ 0.52
SCARNA2-201ENST00000458748 SYNCQ9H7C4 482 aa18.27■□□□□ 0.52
SCARNA2-201ENST00000458748 TAB2Q9NYJ8 693 aa18.27■□□□□ 0.52
SCARNA2-201ENST00000458748 MYO18AQ92614 2054 aaKnown RBP18.27■□□□□ 0.51
SCARNA2-201ENST00000458748 TYW5A2RUC4 315 aaKnown RBP18.26■□□□□ 0.51
SCARNA2-201ENST00000458748 FOXN3O00409 490 aaPredicted RBP18.26■□□□□ 0.51
SCARNA2-201ENST00000458748 NPC1O15118 1278 aa18.26■□□□□ 0.51
SCARNA2-201ENST00000458748 PENKP01210 267 aaPredicted RBP18.26■□□□□ 0.51
SCARNA2-201ENST00000458748 TBX4P57082 545 aa18.26■□□□□ 0.51
SCARNA2-201ENST00000458748 YWHAZP63104 245 aaKnown RBP18.26■□□□□ 0.51
SCARNA2-201ENST00000458748 APBA1Q02410 837 aa18.26■□□□□ 0.51
SCARNA2-201ENST00000458748 NNTQ13423 1086 aa18.26■□□□□ 0.51
SCARNA2-201ENST00000458748 BYSLQ13895 437 aaKnown RBP18.26■□□□□ 0.51
SCARNA2-201ENST00000458748 EFHC1Q5JVL4 640 aa18.26■□□□□ 0.51
SCARNA2-201ENST00000458748 ADGRF1Q5T601 910 aa18.26■□□□□ 0.51
SCARNA2-201ENST00000458748 SFTPA1Q8IWL2 248 aa18.26■□□□□ 0.51
SCARNA2-201ENST00000458748 FAM217AQ8IXS0 508 aa18.26■□□□□ 0.51
SCARNA2-201ENST00000458748 ZNF557Q8N988 423 aaPredicted RBP18.26■□□□□ 0.51
SCARNA2-201ENST00000458748 MSANTD4Q8NCY6 345 aa18.26■□□□□ 0.51
SCARNA2-201ENST00000458748 UCMAQ8WVF2 138 aa18.26■□□□□ 0.51
SCARNA2-201ENST00000458748 AZIN2Q96A70 460 aa18.26■□□□□ 0.51
SCARNA2-201ENST00000458748 PPP1R13BQ96KQ4 1090 aa18.26■□□□□ 0.51
SCARNA2-201ENST00000458748 STK33Q9BYT3 514 aa18.26■□□□□ 0.51
SCARNA2-201ENST00000458748 POPDC2Q9HBU9 364 aa18.26■□□□□ 0.51
SCARNA2-201ENST00000458748 PLCB1Q9NQ66 1216 aa18.26■□□□□ 0.51
SCARNA2-201ENST00000458748 FANCLQ9NW38 375 aa18.26■□□□□ 0.51
SCARNA2-201ENST00000458748 BCCIPQ9P287 314 aaKnown RBP eCLIP18.26■□□□□ 0.51not detected■■□□□ 13.4
SCARNA2-201ENST00000458748 FBXO10Q9UK96 956 aa18.26■□□□□ 0.51
SCARNA2-201ENST00000458748 SLC27A6Q9Y2P4 619 aa18.26■□□□□ 0.51
SCARNA2-201ENST00000458748 E5RJQ4 531 aa18.25■□□□□ 0.51
SCARNA2-201ENST00000458748 IRAK2O43187 625 aa18.25■□□□□ 0.51
SCARNA2-201ENST00000458748 GLI1P08151 1106 aa18.25■□□□□ 0.51
SCARNA2-201ENST00000458748 UCHL3P15374 230 aa18.25■□□□□ 0.51
SCARNA2-201ENST00000458748 NTSR1P30989 418 aa18.25■□□□□ 0.51
SCARNA2-201ENST00000458748 DRAP1Q14919 205 aaPredicted RBP18.25■□□□□ 0.51
SCARNA2-201ENST00000458748 KRT31Q15323 416 aa18.25■□□□□ 0.51
SCARNA2-201ENST00000458748 EMC10Q5UCC4 262 aa18.25■□□□□ 0.51
SCARNA2-201ENST00000458748 FYB2Q5VWT5 728 aa18.25■□□□□ 0.51
SCARNA2-201ENST00000458748 CLEC4CQ8WTT0 213 aa18.25■□□□□ 0.51
SCARNA2-201ENST00000458748 VPS16Q9H269 839 aa18.25■□□□□ 0.51
SCARNA2-201ENST00000458748 ACP6Q9NPH0 428 aa18.25■□□□□ 0.51
SCARNA2-201ENST00000458748 ASNSD1Q9NWL6 643 aa18.25■□□□□ 0.51
SCARNA2-201ENST00000458748 PLK2Q9NYY3 685 aa18.25■□□□□ 0.51
SCARNA2-201ENST00000458748 STOML2Q9UJZ1 356 aa18.25■□□□□ 0.51
SCARNA2-201ENST00000458748 TLR6Q9Y2C9 796 aa18.25■□□□□ 0.51
SCARNA2-201ENST00000458748 NCOR2Q9Y618 2525 aa18.25■□□□□ 0.51
SCARNA2-201ENST00000458748 SGK1O00141 431 aa18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 MSI1O43347 362 aaKnown RBP18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 GABBR2O75899 941 aa18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 RHOBTB1O94844 696 aa18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 CISD3P0C7P0 127 aa18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 PTMSP20962 102 aa18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 GBP1P32455 592 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms