RNA–Protein interactions for RNA: ENST00000458337.5

COMMD1-206, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-206ENST00000458337 ASNSD1Q9NWL6 643 aa13.91□□□□□ -0.18
COMMD1-206ENST00000458337 KIAA1549LQ6ZVL6 1849 aa13.91□□□□□ -0.18
COMMD1-206ENST00000458337 TBC1D3BA6NDS4 549 aa13.9□□□□□ -0.18
COMMD1-206ENST00000458337 NEDD8-MDP1E9PL57 170 aa13.9□□□□□ -0.18
COMMD1-206ENST00000458337 TRIM24O15164 1050 aa13.9□□□□□ -0.18
COMMD1-206ENST00000458337 EPHB6O15197 1021 aa13.9□□□□□ -0.18
COMMD1-206ENST00000458337 GFRA3O60609 400 aa13.9□□□□□ -0.18
COMMD1-206ENST00000458337 NCAM1P13591 858 aa13.9□□□□□ -0.18
COMMD1-206ENST00000458337 ATP1A3P13637 1013 aa13.9□□□□□ -0.18
COMMD1-206ENST00000458337 HOXC13P31276 330 aa13.9□□□□□ -0.18
COMMD1-206ENST00000458337 CNR2P34972 360 aa13.9□□□□□ -0.18
COMMD1-206ENST00000458337 ZNF165P49910 485 aa13.9□□□□□ -0.18
COMMD1-206ENST00000458337 SNX16P57768 344 aa13.9□□□□□ -0.18
COMMD1-206ENST00000458337 DMWDQ09019 674 aa13.9□□□□□ -0.18
COMMD1-206ENST00000458337 IQCB1Q15051 598 aa13.9□□□□□ -0.18
COMMD1-206ENST00000458337 SYCP1Q15431 976 aa13.9□□□□□ -0.18
COMMD1-206ENST00000458337 C2orf27AQ580R0 203 aa13.9□□□□□ -0.18
COMMD1-206ENST00000458337 ADGRF1Q5T601 910 aa13.9□□□□□ -0.18
COMMD1-206ENST00000458337 SYPL2Q5VXT5 272 aa13.9□□□□□ -0.18
COMMD1-206ENST00000458337 NUDT18Q6ZVK8 323 aa13.9□□□□□ -0.18
COMMD1-206ENST00000458337 WDR5BQ86VZ2 330 aa13.9□□□□□ -0.18
COMMD1-206ENST00000458337 LONP2Q86WA8 852 aa13.9□□□□□ -0.18
COMMD1-206ENST00000458337 UNC45BQ8IWX7 931 aa13.9□□□□□ -0.18
COMMD1-206ENST00000458337 TERB1Q8NA31 727 aa13.9□□□□□ -0.18
COMMD1-206ENST00000458337 ACDQ96AP0 544 aa13.9□□□□□ -0.18
COMMD1-206ENST00000458337 SLC39A13Q96H72 371 aa13.9□□□□□ -0.18
COMMD1-206ENST00000458337 EPC1Q9H2F5 836 aa13.9□□□□□ -0.18
COMMD1-206ENST00000458337 POPDC2Q9HBU9 364 aa13.9□□□□□ -0.18
COMMD1-206ENST00000458337 POLR3BQ9NW08 1133 aaPredicted RBP13.9□□□□□ -0.18
COMMD1-206ENST00000458337 TJP2Q9UDY2 1190 aa13.9□□□□□ -0.18
COMMD1-206ENST00000458337 HCN2Q9UL51 889 aa13.9□□□□□ -0.18
COMMD1-206ENST00000458337 SLC8A2Q9UPR5 921 aa13.9□□□□□ -0.18
COMMD1-206ENST00000458337 NAALADL1Q9UQQ1 740 aa13.9□□□□□ -0.18
COMMD1-206ENST00000458337 SLC27A6Q9Y2P4 619 aa13.9□□□□□ -0.18
COMMD1-206ENST00000458337 MSI1O43347 362 aaKnown RBP13.89□□□□□ -0.19
COMMD1-206ENST00000458337 HRO43593 1189 aa13.89□□□□□ -0.19
COMMD1-206ENST00000458337 IGLV3-25P01717 112 aa13.89□□□□□ -0.19
COMMD1-206ENST00000458337 GABRB2P47870 512 aa13.89□□□□□ -0.19
COMMD1-206ENST00000458337 FNTBP49356 437 aa13.89□□□□□ -0.19
COMMD1-206ENST00000458337 TBX4P57082 545 aa13.89□□□□□ -0.19
COMMD1-206ENST00000458337 POLR2FP61218 127 aaKnown RBP13.89□□□□□ -0.19
COMMD1-206ENST00000458337 UBXN1Q04323 297 aa13.89□□□□□ -0.19
COMMD1-206ENST00000458337 DMC1Q14565 340 aa13.89□□□□□ -0.19
COMMD1-206ENST00000458337 TAF5Q15542 800 aa13.89□□□□□ -0.19
COMMD1-206ENST00000458337 PTPN20Q4JDL3 420 aa13.89□□□□□ -0.19
COMMD1-206ENST00000458337 EFHC1Q5JVL4 640 aa13.89□□□□□ -0.19
COMMD1-206ENST00000458337 EMC10Q5UCC4 262 aa13.89□□□□□ -0.19
COMMD1-206ENST00000458337 NUGGCQ68CJ6 796 aa13.89□□□□□ -0.19
COMMD1-206ENST00000458337 GRAMD4Q6IC98 578 aa13.89□□□□□ -0.19
COMMD1-206ENST00000458337 NOP9Q86U38 636 aaKnown RBP13.89□□□□□ -0.19
COMMD1-206ENST00000458337 ZNF677Q86XU0 584 aa13.89□□□□□ -0.19
COMMD1-206ENST00000458337 PASD1Q8IV76 773 aa13.89□□□□□ -0.19
COMMD1-206ENST00000458337 IL17RCQ8NAC3 791 aa13.89□□□□□ -0.19
COMMD1-206ENST00000458337 TMEM35BQ8NCS4 154 aa13.89□□□□□ -0.19
COMMD1-206ENST00000458337 C1orf131Q8NDD1 294 aaKnown RBP13.89□□□□□ -0.19
COMMD1-206ENST00000458337 ZNF397Q8NF99 534 aaPredicted RBP13.89□□□□□ -0.19
COMMD1-206ENST00000458337 EPS8L1Q8TE68 723 aa13.89□□□□□ -0.19
COMMD1-206ENST00000458337 DQX1Q8TE96 717 aaKnown RBP13.89□□□□□ -0.19
COMMD1-206ENST00000458337 FAM149B1Q96BN6 582 aa13.89□□□□□ -0.19
COMMD1-206ENST00000458337 FCRL2Q96LA5 508 aaPredicted RBP13.89□□□□□ -0.19
COMMD1-206ENST00000458337 NOX5Q96PH1 765 aa13.89□□□□□ -0.19
COMMD1-206ENST00000458337 SLC2A13Q96QE2 648 aa13.89□□□□□ -0.19
COMMD1-206ENST00000458337 SLC2A11Q9BYW1 496 aa13.89□□□□□ -0.19
COMMD1-206ENST00000458337 FAM207AQ9NSI2 230 aaPredicted RBP13.89□□□□□ -0.19
COMMD1-206ENST00000458337 DNAJC17Q9NVM6 304 aaKnown RBP13.89□□□□□ -0.19
COMMD1-206ENST00000458337 EBF1Q9UH73 591 aa13.89□□□□□ -0.19
COMMD1-206ENST00000458337 MMP17Q9ULZ9 603 aa13.89□□□□□ -0.19
COMMD1-206ENST00000458337 TLR6Q9Y2C9 796 aa13.89□□□□□ -0.19
COMMD1-206ENST00000458337 LSM8O95777 96 aaKnown RBP13.88□□□□□ -0.19
COMMD1-206ENST00000458337 ERBB2P04626 1255 aa13.88□□□□□ -0.19
COMMD1-206ENST00000458337 SOX5P35711 763 aa13.88□□□□□ -0.19
COMMD1-206ENST00000458337 DGKGP49619 791 aa13.88□□□□□ -0.19
COMMD1-206ENST00000458337 SEC13P55735 322 aa13.88□□□□□ -0.19
COMMD1-206ENST00000458337 ZNF445P59923 1031 aa13.88□□□□□ -0.19
COMMD1-206ENST00000458337 SLC6A3Q01959 620 aa13.88□□□□□ -0.19
COMMD1-206ENST00000458337 KDSRQ06136 332 aa13.88□□□□□ -0.19
COMMD1-206ENST00000458337 MPPE1Q53F39 396 aa13.88□□□□□ -0.19
COMMD1-206ENST00000458337 MPP7Q5T2T1 576 aa13.88□□□□□ -0.19
COMMD1-206ENST00000458337 RNF43Q68DV7 783 aa13.88□□□□□ -0.19
COMMD1-206ENST00000458337 OLFML1Q6UWY5 402 aa13.88□□□□□ -0.19
COMMD1-206ENST00000458337 ZDHHC17Q8IUH5 632 aa13.88□□□□□ -0.19
COMMD1-206ENST00000458337 PIWIL1Q96J94 861 aaKnown RBP13.88□□□□□ -0.19
COMMD1-206ENST00000458337 SERPINB11Q96P15 392 aa13.88□□□□□ -0.19
COMMD1-206ENST00000458337 NLRC4Q9NPP4 1024 aa13.88□□□□□ -0.19
COMMD1-206ENST00000458337 RTN4Q9NQC3 1192 aaKnown RBP13.88□□□□□ -0.19
COMMD1-206ENST00000458337 PLK2Q9NYY3 685 aa13.88□□□□□ -0.19
COMMD1-206ENST00000458337 NOCTQ9UK39 431 aaKnown RBP13.88□□□□□ -0.19
COMMD1-206ENST00000458337 CEP83Q9Y592 693 aa13.88□□□□□ -0.19
COMMD1-206ENST00000458337 SDK1Q7Z5N4 2213 aa13.87□□□□□ -0.19
COMMD1-206ENST00000458337 PRRT4C9JH25 899 aa13.87□□□□□ -0.19
COMMD1-206ENST00000458337 CAPN9O14815 690 aa13.87□□□□□ -0.19
COMMD1-206ENST00000458337 ACSL4O60488 711 aa13.87□□□□□ -0.19
COMMD1-206ENST00000458337 HSF2BPO75031 334 aa13.87□□□□□ -0.19
COMMD1-206ENST00000458337 ADAM23O75077 832 aa13.87□□□□□ -0.19
COMMD1-206ENST00000458337 GFPT2O94808 682 aa13.87□□□□□ -0.19
COMMD1-206ENST00000458337 CYBBP04839 570 aa13.87□□□□□ -0.19
COMMD1-206ENST00000458337 HNRNPLP14866 589 aaKnown RBP eCLIP13.87□□□□□ -0.195e-8■■■□□ 14.7
COMMD1-206ENST00000458337 CHRNB2P17787 502 aa13.87□□□□□ -0.19
COMMD1-206ENST00000458337 TIE1P35590 1138 aa13.87□□□□□ -0.19
COMMD1-206ENST00000458337 SCNN1AP37088 669 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms