RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 CCDC63Q8NA47 563 aa17.25■□□□□ 0.35
CCDC43-202ENST00000457422 ZNF75CPQ92670 426 aaPredicted RBP17.25■□□□□ 0.35
CCDC43-202ENST00000457422 KLF6Q99612 283 aaPredicted RBP17.25■□□□□ 0.35
CCDC43-202ENST00000457422 MED10Q9BTT4 135 aa17.25■□□□□ 0.35
CCDC43-202ENST00000457422 VPS11Q9H270 941 aa17.25■□□□□ 0.35
CCDC43-202ENST00000457422 LRRC4Q9HBW1 653 aa17.25■□□□□ 0.35
CCDC43-202ENST00000457422 ARHGEF4Q9NR80 690 aa17.25■□□□□ 0.35
CCDC43-202ENST00000457422 CHST12Q9NRB3 414 aa17.25■□□□□ 0.35
CCDC43-202ENST00000457422 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.25■□□□□ 0.35
CCDC43-202ENST00000457422 GOLGA8RI6L899 631 aa17.25■□□□□ 0.35
CCDC43-202ENST00000457422 ADRA1DP25100 572 aa17.25■□□□□ 0.35
CCDC43-202ENST00000457422 MLH1P40692 756 aa17.25■□□□□ 0.35
CCDC43-202ENST00000457422 NDUFV1P49821 464 aa17.25■□□□□ 0.35
CCDC43-202ENST00000457422 NEK3P51956 506 aa17.25■□□□□ 0.35
CCDC43-202ENST00000457422 NCALDP61601 193 aa17.25■□□□□ 0.35
CCDC43-202ENST00000457422 FAAP100Q0VG06 881 aa17.25■□□□□ 0.35
CCDC43-202ENST00000457422 PRPF39Q86UA1 669 aaKnown RBP17.25■□□□□ 0.35
CCDC43-202ENST00000457422 LRRC6Q86X45 466 aa17.25■□□□□ 0.35
CCDC43-202ENST00000457422 IFNL1Q8IU54 200 aa17.25■□□□□ 0.35
CCDC43-202ENST00000457422 TFB1MQ8WVM0 346 aaKnown RBP17.25■□□□□ 0.35
CCDC43-202ENST00000457422 HTR3CQ8WXA8 447 aa17.25■□□□□ 0.35
CCDC43-202ENST00000457422 APOPT1Q96IL0 206 aa17.25■□□□□ 0.35
CCDC43-202ENST00000457422 SIGLEC10Q96LC7 697 aa17.25■□□□□ 0.35
CCDC43-202ENST00000457422 SENP8Q96LD8 212 aa17.25■□□□□ 0.35
CCDC43-202ENST00000457422 MTG1Q9BT17 334 aaPredicted RBP17.25■□□□□ 0.35
CCDC43-202ENST00000457422 XAB2Q9HCS7 855 aaKnown RBP17.25■□□□□ 0.35
CCDC43-202ENST00000457422 SLCO1B3Q9NPD5 702 aa17.25■□□□□ 0.35
CCDC43-202ENST00000457422 FAM105AQ9NUU6 356 aa17.25■□□□□ 0.35
CCDC43-202ENST00000457422 ST3GAL5Q9UNP4 418 aa17.25■□□□□ 0.35
CCDC43-202ENST00000457422 ZNF638Q14966 1978 aaKnown RBP17.24■□□□□ 0.35
CCDC43-202ENST00000457422 FBXO21O94952 628 aa17.24■□□□□ 0.35
CCDC43-202ENST00000457422 APOEP02649 317 aa17.24■□□□□ 0.35
CCDC43-202ENST00000457422 CTSHP09668 335 aa17.24■□□□□ 0.35
CCDC43-202ENST00000457422 FAM200BP0CF97 657 aa17.24■□□□□ 0.35
CCDC43-202ENST00000457422 DHRS4L1P0CG22 281 aa17.24■□□□□ 0.35
CCDC43-202ENST00000457422 VAV1P15498 845 aa17.24■□□□□ 0.35
CCDC43-202ENST00000457422 FDFT1P37268 417 aa17.24■□□□□ 0.35
CCDC43-202ENST00000457422 LHX1P48742 406 aa17.24■□□□□ 0.35
CCDC43-202ENST00000457422 GJA9P57773 515 aa17.24■□□□□ 0.35
CCDC43-202ENST00000457422 TTC39BQ5VTQ0 682 aaPredicted RBP17.24■□□□□ 0.35
CCDC43-202ENST00000457422 SIX6OS1Q8N1H7 587 aa17.24■□□□□ 0.35
CCDC43-202ENST00000457422 APBB2Q92870 758 aa17.24■□□□□ 0.35
CCDC43-202ENST00000457422 WNT8BQ93098 351 aa17.24■□□□□ 0.35
CCDC43-202ENST00000457422 CRTAC1Q9NQ79 661 aa17.24■□□□□ 0.35
CCDC43-202ENST00000457422 TMPRSS4Q9NRS4 437 aa17.24■□□□□ 0.35
CCDC43-202ENST00000457422 KRT82Q9NSB4 513 aa17.24■□□□□ 0.35
CCDC43-202ENST00000457422 USH1CQ9Y6N9 552 aa17.24■□□□□ 0.35
CCDC43-202ENST00000457422 SYNJ2BP-COX16A0A087WUM0 186 aa17.24■□□□□ 0.35
CCDC43-202ENST00000457422 A0A0A0MRY4 1105 aa17.24■□□□□ 0.35
CCDC43-202ENST00000457422 H3BRJ5 948 aa17.24■□□□□ 0.35
CCDC43-202ENST00000457422 CTGFP29279 349 aa17.24■□□□□ 0.35
CCDC43-202ENST00000457422 SKIV2L2P42285 1042 aaKnown RBP17.24■□□□□ 0.35
CCDC43-202ENST00000457422 AFF1P51825 1210 aaKnown RBP17.24■□□□□ 0.35
CCDC43-202ENST00000457422 RABGGTBP53611 331 aa17.24■□□□□ 0.35
CCDC43-202ENST00000457422 CDK16Q00536 496 aa17.24■□□□□ 0.35
CCDC43-202ENST00000457422 SEPT7Q16181 437 aaKnown RBP17.24■□□□□ 0.35
CCDC43-202ENST00000457422 RSPH3Q86UC2 560 aa17.24■□□□□ 0.35
CCDC43-202ENST00000457422 CHSY1Q86X52 802 aa17.24■□□□□ 0.35
CCDC43-202ENST00000457422 RNF139Q8WU17 664 aa17.24■□□□□ 0.35
CCDC43-202ENST00000457422 LPPQ93052 612 aa17.24■□□□□ 0.35
CCDC43-202ENST00000457422 SERAC1Q96JX3 654 aa17.24■□□□□ 0.35
CCDC43-202ENST00000457422 SPATA13Q96N96 652 aa17.24■□□□□ 0.35
CCDC43-202ENST00000457422 SLC9A7Q96T83 725 aa17.24■□□□□ 0.35
CCDC43-202ENST00000457422 GAD1Q99259 594 aa17.24■□□□□ 0.35
CCDC43-202ENST00000457422 EBNA1BP2Q99848 306 aaKnown RBP17.24■□□□□ 0.35
CCDC43-202ENST00000457422 DDX43Q9NXZ2 648 aaKnown RBP17.24■□□□□ 0.35
CCDC43-202ENST00000457422 COX16Q9P0S2 106 aa17.24■□□□□ 0.35
CCDC43-202ENST00000457422 C9IYK1 514 aa17.23■□□□□ 0.35
CCDC43-202ENST00000457422 MFSD11O43934 449 aa17.23■□□□□ 0.35
CCDC43-202ENST00000457422 LPXNO60711 386 aa17.23■□□□□ 0.35
CCDC43-202ENST00000457422 THP07101 528 aa17.23■□□□□ 0.35
CCDC43-202ENST00000457422 MLNP12872 115 aa17.23■□□□□ 0.35
CCDC43-202ENST00000457422 ETV4P43268 484 aa17.23■□□□□ 0.35
CCDC43-202ENST00000457422 TKTL1P51854 596 aa17.23■□□□□ 0.35
CCDC43-202ENST00000457422 AIF1P55008 147 aa17.23■□□□□ 0.35
CCDC43-202ENST00000457422 MAP3K7CLP57077 242 aa17.23■□□□□ 0.35
CCDC43-202ENST00000457422 PRKD1Q15139 912 aaPredicted RBP17.23■□□□□ 0.35
CCDC43-202ENST00000457422 NBPF20Q3BBV1 942 aa17.23■□□□□ 0.35
CCDC43-202ENST00000457422 GNASQ5JWF2 1037 aa17.23■□□□□ 0.35
CCDC43-202ENST00000457422 GDF6Q6KF10 455 aaPredicted RBP17.23■□□□□ 0.35
CCDC43-202ENST00000457422 CXCL17Q6UXB2 119 aa17.23■□□□□ 0.35
CCDC43-202ENST00000457422 UNC5AQ6ZN44 842 aa17.23■□□□□ 0.35
CCDC43-202ENST00000457422 HFE2Q6ZVN8 426 aa17.23■□□□□ 0.35
CCDC43-202ENST00000457422 ANKLE1Q8NAG6 615 aa17.23■□□□□ 0.35
CCDC43-202ENST00000457422 SYT15Q9BQS2 421 aa17.23■□□□□ 0.35
CCDC43-202ENST00000457422 SENP6Q9GZR1 1112 aaPredicted RBP17.23■□□□□ 0.35
CCDC43-202ENST00000457422 ECT2Q9H8V3 914 aa17.23■□□□□ 0.35
CCDC43-202ENST00000457422 SLC17A7Q9P2U7 560 aa17.23■□□□□ 0.35
CCDC43-202ENST00000457422 NR2E3Q9Y5X4 410 aa17.23■□□□□ 0.35
CCDC43-202ENST00000457422 MGRN1O60291 552 aa17.22■□□□□ 0.35
CCDC43-202ENST00000457422 KRT37O76014 449 aa17.22■□□□□ 0.35
CCDC43-202ENST00000457422 GLUD2P49448 558 aa17.22■□□□□ 0.35
CCDC43-202ENST00000457422 ANKRD20A2Q5SQ80 823 aa17.22■□□□□ 0.35
CCDC43-202ENST00000457422 ANKRD20A1Q5TYW2 823 aa17.22■□□□□ 0.35
CCDC43-202ENST00000457422 ANKRD20A3Q5VUR7 823 aa17.22■□□□□ 0.35
CCDC43-202ENST00000457422 CYS1Q717R9 158 aa17.22■□□□□ 0.35
CCDC43-202ENST00000457422 OTOAQ7RTW8 1153 aa17.22■□□□□ 0.35
CCDC43-202ENST00000457422 GSDMBQ8TAX9 411 aa17.22■□□□□ 0.35
CCDC43-202ENST00000457422 C10orf82Q8WW14 230 aa17.22■□□□□ 0.35
CCDC43-202ENST00000457422 NTAN1Q96AB6 310 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms