RNA–Protein interactions for RNA: ENST00000456608.1

CASC4P1-201, Transcript of cancer susceptibility 4 pseudogene 1, humanhuman

BASIC

Gene CASC4P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4P1-201ENST00000456608 CSH2P0DML3 217 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 RARGP13631 454 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 ELF1P32519 619 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 CLCN6P51797 869 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 ERVFC1P60507 584 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 DYNLT1P63172 113 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 OTUD4Q01804 1114 aaKnown RBP13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 UBE3AQ05086 875 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 SEMA3BQ13214 749 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 PPP2R5DQ14738 602 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 SHHQ15465 462 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 ARL13BQ3SXY8 428 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 BRMS1LQ5PSV4 323 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 LILRA6Q6PI73 481 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 IFT20Q8IY31 132 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 CCDC105Q8IYK2 499 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 ZNF276Q8N554 614 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 PDZD8Q8NEN9 1154 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 ATL2Q8NHH9 583 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 ACTL9Q8TC94 416 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 SPPL3Q8TCT6 385 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 GRK7Q8WTQ7 553 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 CASKIN2Q8WXE0 1202 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 NKD2Q969F2 451 aaPredicted RBP13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 MYRFLQ96LU7 910 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 SERPINB11Q96P15 392 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 CSPG4P5Q96PW8 444 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 FAM118BQ9BPY3 351 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 HINFPQ9BQA5 517 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 TRIM51Q9BSJ1 452 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 C17orf80Q9BSJ5 609 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 RAB17Q9H0T7 212 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 PRDM16Q9HAZ2 1276 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 ALG13Q9NP73 1137 aaKnown RBP13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 OLA1Q9NTK5 396 aaKnown RBP13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 ARHGEF38Q9NXL2 777 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 CWC15Q9P013 229 aaKnown RBP13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 SFMBT1Q9UHJ3 866 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 RASAL2Q9UJF2 1139 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 NUDT5Q9UKK9 219 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 DNPEPQ9ULA0 475 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 DRG1Q9Y295 367 aaKnown RBP13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 INSL5Q9Y5Q6 135 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 NR2E3Q9Y5X4 410 aa13.53□□□□□ -0.24
CASC4P1-201ENST00000456608 DOCK4Q8N1I0 1966 aa13.52□□□□□ -0.24
CASC4P1-201ENST00000456608 MKI67P46013 3256 aaKnown RBP13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 GRXCR1A8MXD5 290 aa13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 H3BRJ5 948 aa13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 PRRG1O14668 218 aa13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 APOL1O14791 398 aa13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 ECEL1O95672 775 aa13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 RB1P06400 928 aa13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 MYBL2P10244 700 aa13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 MYOGP15173 224 aa13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 PECAM1P16284 738 aaPredicted RBP13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 TGM2P21980 687 aa13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 DNAJB1P25685 340 aa13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 ARL4AP40617 200 aa13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 ALDH1A3P47895 512 aa13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 VCPP55072 806 aaKnown RBP13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 NNTQ13423 1086 aa13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 OASLQ15646 514 aaKnown RBP13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 COL13A1Q5TAT6 717 aaPredicted RBP13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 SNX30Q5VWJ9 437 aa13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 DUPD1Q68J44 220 aa13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 FAM109BQ6ICB4 259 aaPredicted RBP13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 SYDE1Q6ZW31 735 aaPredicted RBP13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 TMC7Q7Z402 723 aa13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 PLD5Q8N7P1 536 aa13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 POF1BQ8WVV4 589 aa13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 HNRNPLLQ8WVV9 542 aaKnown RBP13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 HAUS1Q96CS2 278 aa13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 TRMT2BQ96GJ1 504 aaKnown RBP13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 SLC39A13Q96H72 371 aa13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 TCF25Q9BQ70 676 aa13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 ERP44Q9BS26 406 aa13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 TKTL2Q9H0I9 626 aa13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 FEZ2Q9UHY8 353 aaPredicted RBP13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 MAGED2Q9UNF1 606 aaPredicted RBP13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 NEU2Q9Y3R4 380 aa13.52□□□□□ -0.25
CASC4P1-201ENST00000456608 ESYT3A0FGR9 886 aa13.51□□□□□ -0.25
CASC4P1-201ENST00000456608 C2orf71A6NGG8 1288 aa13.51□□□□□ -0.25
CASC4P1-201ENST00000456608 CCDC85CA6NKD9 419 aa13.51□□□□□ -0.25
CASC4P1-201ENST00000456608 MSI1O43347 362 aaKnown RBP13.51□□□□□ -0.25
CASC4P1-201ENST00000456608 TGM5O43548 720 aa13.51□□□□□ -0.25
CASC4P1-201ENST00000456608 ERLIN1O75477 346 aa13.51□□□□□ -0.25
CASC4P1-201ENST00000456608 ADH1AP07327 375 aa13.51□□□□□ -0.25
CASC4P1-201ENST00000456608 GOT1P17174 413 aa13.51□□□□□ -0.25
CASC4P1-201ENST00000456608 AMPD1P23109 780 aa13.51□□□□□ -0.25
CASC4P1-201ENST00000456608 CA8P35219 290 aa13.51□□□□□ -0.25
CASC4P1-201ENST00000456608 HCAR3P49019 387 aa13.51□□□□□ -0.25
CASC4P1-201ENST00000456608 CARSP49589 748 aaKnown RBP13.51□□□□□ -0.25
CASC4P1-201ENST00000456608 ZNF135P52742 658 aaPredicted RBP13.51□□□□□ -0.25
CASC4P1-201ENST00000456608 DRG2P55039 364 aaKnown RBP13.51□□□□□ -0.25
CASC4P1-201ENST00000456608 TWF1Q12792 350 aa13.51□□□□□ -0.25
CASC4P1-201ENST00000456608 PTK6Q13882 451 aa13.51□□□□□ -0.25
CASC4P1-201ENST00000456608 BYSLQ13895 437 aaKnown RBP13.51□□□□□ -0.25
CASC4P1-201ENST00000456608 VEPH1Q14D04 833 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms