RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 HADHQ16836 314 aaKnown RBP10.63□□□□□ -0.71
CLIP4-208ENST00000456385 PPM1LQ5SGD2 360 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 DCAF8Q5TAQ9 597 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 SH3PXD2AQ5TCZ1 1133 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 MEX3CQ5U5Q3 659 aaKnown RBP10.63□□□□□ -0.71
CLIP4-208ENST00000456385 TICAM1Q8IUC6 712 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 AGR3Q8TD06 166 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 LENG8Q96PV6 779 aaPredicted RBP10.63□□□□□ -0.71
CLIP4-208ENST00000456385 RNPEPQ9H4A4 650 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 TDRD3Q9H7E2 651 aaKnown RBP10.63□□□□□ -0.71
CLIP4-208ENST00000456385 ANKEF1Q9NU02 776 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 PLK2Q9NYY3 685 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 HERC5Q9UII4 1024 aaKnown RBP10.63□□□□□ -0.71
CLIP4-208ENST00000456385 RIMS3Q9UJD0 308 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 UBIAD1Q9Y5Z9 338 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 STRCQ7RTU9 1775 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 TMEM221A6NGB7 291 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 WDR64B1ANS9 1081 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 TRDMT1O14717 391 aaKnown RBP10.63□□□□□ -0.71
CLIP4-208ENST00000456385 ALDOAP04075 364 aaKnown RBP10.63□□□□□ -0.71
CLIP4-208ENST00000456385 THRAP10827 490 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 XRCC1P18887 633 aaPredicted RBP10.63□□□□□ -0.71
CLIP4-208ENST00000456385 SERPINB5P36952 375 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 GRIA1P42261 906 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 GABRB2P47870 512 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 NUDT2P50583 147 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 HSD17B4P51659 736 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 THOP1P52888 689 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 MS4A2Q01362 244 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 ADGRE1Q14246 886 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 PPM1JQ5JR12 505 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 DENND1BQ6P3S1 775 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 SCARA5Q6ZMJ2 495 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 DEPDC1BQ8WUY9 529 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 MASTLQ96GX5 879 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 PEBP4Q96S96 227 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 KCNK16Q96T55 309 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 PKP2Q99959 881 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 CISHQ9NSE2 258 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 TMX2Q9Y320 296 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 AFG3L2Q9Y4W6 797 aa10.63□□□□□ -0.71
CLIP4-208ENST00000456385 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.62□□□□□ -0.71
CLIP4-208ENST00000456385 FAM159BA6NKW6 160 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 TPP1O14773 563 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 XPO1O14980 1071 aaKnown RBP10.62□□□□□ -0.71
CLIP4-208ENST00000456385 LSM8O95777 96 aaKnown RBP10.62□□□□□ -0.71
CLIP4-208ENST00000456385 PRKCGP05129 697 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 RBL1P28749 1068 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 HSPA1LP34931 641 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 PKNOX1P55347 436 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 PSMC1P62191 440 aaKnown RBP10.62□□□□□ -0.71
CLIP4-208ENST00000456385 SP4Q02446 784 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 TAP1Q03518 808 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 SLC10A2Q12908 348 aaPredicted RBP10.62□□□□□ -0.71
CLIP4-208ENST00000456385 KLF10Q13118 480 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 MPP3Q13368 585 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 PDE1CQ14123 709 aaPredicted RBP10.62□□□□□ -0.71
CLIP4-208ENST00000456385 FLOT2Q14254 428 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 NOMO1Q15155 1222 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 NRF1Q16656 503 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 USP41Q3LFD5 358 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 SLC9B1Q4ZJI4 515 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 PPP1R2P3Q6NXS1 205 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 BORAQ6PGQ7 559 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 CMASQ8NFW8 434 aaPredicted RBP10.62□□□□□ -0.71
CLIP4-208ENST00000456385 PPP4R1Q8TF05 950 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 KBTBD7Q8WVZ9 684 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 USP13Q92995 863 aaPredicted RBP10.62□□□□□ -0.71
CLIP4-208ENST00000456385 PGBD4Q96DM1 585 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 PPP1R36Q96LQ0 422 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 CDRT15Q96T59 188 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 GLIS2Q9BZE0 524 aaPredicted RBP10.62□□□□□ -0.71
CLIP4-208ENST00000456385 IMPG2Q9BZV3 1241 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 STN1Q9H668 368 aaKnown RBP10.62□□□□□ -0.71
CLIP4-208ENST00000456385 COG4Q9H9E3 785 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.62□□□□□ -0.71
CLIP4-208ENST00000456385 DNAJC28Q9NX36 388 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 GABBR1Q9UBS5 961 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 STK39Q9UEW8 545 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 RSL24D1Q9UHA3 163 aaKnown RBP10.62□□□□□ -0.71
CLIP4-208ENST00000456385 CCPG1Q9ULG6 757 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 USP18Q9UMW8 372 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 HEY1Q9Y5J3 304 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 CFLARO15519 480 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 FAM189A1O60320 539 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 FOXD2O60548 495 aaPredicted RBP10.62□□□□□ -0.71
CLIP4-208ENST00000456385 PLIN3O60664 434 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 DGKIO75912 1065 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 SERPINE1P05121 402 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 PDGFRBP09619 1106 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 TFPTP0C1Z6 253 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 ENTPD1P49961 510 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 CDH6P55285 790 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 MYL6P60660 151 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 CRADDP78560 199 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 ORC1Q13415 861 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 ANKDD1AQ495B1 522 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 SLC44A4Q53GD3 710 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 SP8Q8IXZ3 490 aa10.62□□□□□ -0.71
CLIP4-208ENST00000456385 ALDH16A1Q8IZ83 802 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms