RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 TCRBV21S2A2A0A5A6 115 aa18.65■□□□□ 0.58
MSH6-207ENST00000456246 ANTXRLA6NF34 631 aa18.65■□□□□ 0.58
MSH6-207ENST00000456246 TRIM24O15164 1050 aa18.65■□□□□ 0.58
MSH6-207ENST00000456246 CISD3P0C7P0 127 aa18.65■□□□□ 0.58
MSH6-207ENST00000456246 ZNF806P0C7X5 589 aa18.65■□□□□ 0.58
MSH6-207ENST00000456246 HNRNPLP14866 589 aaKnown RBP eCLIP18.65■□□□□ 0.58
MSH6-207ENST00000456246 GNA15P30679 374 aa18.65■□□□□ 0.58
MSH6-207ENST00000456246 GPD2P43304 727 aa18.65■□□□□ 0.58
MSH6-207ENST00000456246 RPL34P49207 117 aaKnown RBP18.65■□□□□ 0.58
MSH6-207ENST00000456246 RING1Q06587 406 aa18.65■□□□□ 0.58
MSH6-207ENST00000456246 EIF4HQ15056 248 aaKnown RBP18.65■□□□□ 0.58
MSH6-207ENST00000456246 MAN2A1Q16706 1144 aa18.65■□□□□ 0.58
MSH6-207ENST00000456246 MPPE1Q53F39 396 aa18.65■□□□□ 0.58
MSH6-207ENST00000456246 NUGGCQ68CJ6 796 aa18.65■□□□□ 0.58
MSH6-207ENST00000456246 IRF2BP1Q8IU81 584 aa18.65■□□□□ 0.58
MSH6-207ENST00000456246 C12orf50Q8NA57 414 aaPredicted RBP18.65■□□□□ 0.58
MSH6-207ENST00000456246 UCMAQ8WVF2 138 aa18.65■□□□□ 0.58
MSH6-207ENST00000456246 BHMTQ93088 406 aa18.65■□□□□ 0.58
MSH6-207ENST00000456246 CRACR2AQ9BSW2 395 aa18.65■□□□□ 0.58
MSH6-207ENST00000456246 VPS45Q9NRW7 570 aa18.65■□□□□ 0.58
MSH6-207ENST00000456246 PLK2Q9NYY3 685 aa18.65■□□□□ 0.58
MSH6-207ENST00000456246 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.65■□□□□ 0.58
MSH6-207ENST00000456246 PRRT4C9JH25 899 aa18.64■□□□□ 0.57
MSH6-207ENST00000456246 LETM1O95202 739 aaPredicted RBP18.64■□□□□ 0.57
MSH6-207ENST00000456246 MPLP40238 635 aa18.64■□□□□ 0.57
MSH6-207ENST00000456246 P2RY2P41231 377 aa18.64■□□□□ 0.57
MSH6-207ENST00000456246 DPCR1Q3MIW9 517 aa18.64■□□□□ 0.57
MSH6-207ENST00000456246 PLA2G2CQ5R387 149 aa18.64■□□□□ 0.57
MSH6-207ENST00000456246 EGFLAMQ63HQ2 1017 aa18.64■□□□□ 0.57
MSH6-207ENST00000456246 PMS2CLQ68D20 193 aa18.64■□□□□ 0.57
MSH6-207ENST00000456246 TOGARAM2Q6ZUX3 1019 aa18.64■□□□□ 0.57
MSH6-207ENST00000456246 BEND5Q7L4P6 421 aa18.64■□□□□ 0.57
MSH6-207ENST00000456246 ANKS1BQ7Z6G8 1248 aa18.64■□□□□ 0.57
MSH6-207ENST00000456246 UNC45BQ8IWX7 931 aa18.64■□□□□ 0.57
MSH6-207ENST00000456246 DDI1Q8WTU0 396 aa18.64■□□□□ 0.57
MSH6-207ENST00000456246 HMGB4Q8WW32 186 aa18.64■□□□□ 0.57
MSH6-207ENST00000456246 ZNF606Q8WXB4 792 aa18.64■□□□□ 0.57
MSH6-207ENST00000456246 GBP4Q96PP9 640 aa18.64■□□□□ 0.57
MSH6-207ENST00000456246 GABRG3Q99928 467 aa18.64■□□□□ 0.57
MSH6-207ENST00000456246 ST7Q9NRC1 585 aa18.64■□□□□ 0.57
MSH6-207ENST00000456246 SFMBT1Q9UHJ3 866 aa18.64■□□□□ 0.57
MSH6-207ENST00000456246 PLXND1Q9Y4D7 1925 aa18.63■□□□□ 0.57
MSH6-207ENST00000456246 DCLK1O15075 740 aa18.63■□□□□ 0.57
MSH6-207ENST00000456246 THAP12O43422 761 aa18.63■□□□□ 0.57
MSH6-207ENST00000456246 GABBR2O75899 941 aa18.63■□□□□ 0.57
MSH6-207ENST00000456246 SLC9A1P19634 815 aa18.63■□□□□ 0.57
MSH6-207ENST00000456246 DPP6P42658 865 aa18.63■□□□□ 0.57
MSH6-207ENST00000456246 SLC11A2P49281 568 aa18.63■□□□□ 0.57
MSH6-207ENST00000456246 NNTQ13423 1086 aa18.63■□□□□ 0.57
MSH6-207ENST00000456246 AASDHQ4L235 1098 aaPredicted RBP18.63■□□□□ 0.57
MSH6-207ENST00000456246 SPDYCQ5MJ68 293 aa18.63■□□□□ 0.57
MSH6-207ENST00000456246 ADGRF1Q5T601 910 aa18.63■□□□□ 0.57
MSH6-207ENST00000456246 PGBD3Q8N328 593 aa18.63■□□□□ 0.57
MSH6-207ENST00000456246 ZNF557Q8N988 423 aaPredicted RBP18.63■□□□□ 0.57
MSH6-207ENST00000456246 SHC3Q92529 594 aa18.63■□□□□ 0.57
MSH6-207ENST00000456246 SERPINB11Q96P15 392 aa18.63■□□□□ 0.57
MSH6-207ENST00000456246 ZDHHC4Q9NPG8 344 aa18.63■□□□□ 0.57
MSH6-207ENST00000456246 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.62■□□□□ 0.57
MSH6-207ENST00000456246 SLC30A4O14863 429 aa18.62■□□□□ 0.57
MSH6-207ENST00000456246 IRAK2O43187 625 aa18.62■□□□□ 0.57
MSH6-207ENST00000456246 ZNF217O75362 1048 aa18.62■□□□□ 0.57
MSH6-207ENST00000456246 IGLV3-27P01718 113 aa18.62■□□□□ 0.57
MSH6-207ENST00000456246 PON1P27169 355 aa18.62■□□□□ 0.57
MSH6-207ENST00000456246 LIMK1P53667 647 aa18.62■□□□□ 0.57
MSH6-207ENST00000456246 STARD3Q14849 445 aa18.62■□□□□ 0.57
MSH6-207ENST00000456246 ARHGAP44Q17R89 818 aa18.62■□□□□ 0.57
MSH6-207ENST00000456246 AZIN2Q96A70 460 aa18.62■□□□□ 0.57
MSH6-207ENST00000456246 DDX50Q9BQ39 737 aaKnown RBP18.62■□□□□ 0.57
MSH6-207ENST00000456246 MIS12Q9H081 205 aa18.62■□□□□ 0.57
MSH6-207ENST00000456246 NDST4Q9H3R1 872 aa18.62■□□□□ 0.57
MSH6-207ENST00000456246 HCN2Q9UL51 889 aa18.62■□□□□ 0.57
MSH6-207ENST00000456246 A0A1W2PQF6 199 aa18.61■□□□□ 0.57
MSH6-207ENST00000456246 BCLAF3A2AJT9 711 aaKnown RBP18.61■□□□□ 0.57
MSH6-207ENST00000456246 GOLGA6L22H0YM25 854 aa18.61■□□□□ 0.57
MSH6-207ENST00000456246 PIK3R2O00459 728 aa18.61■□□□□ 0.57
MSH6-207ENST00000456246 MSI1O43347 362 aaKnown RBP18.61■□□□□ 0.57
MSH6-207ENST00000456246 TIMM44O43615 452 aa18.61■□□□□ 0.57
MSH6-207ENST00000456246 CALCAP01258 141 aa18.61■□□□□ 0.57
MSH6-207ENST00000456246 NCAM1P13591 858 aa18.61■□□□□ 0.57
MSH6-207ENST00000456246 USP8P40818 1118 aa18.61■□□□□ 0.57
MSH6-207ENST00000456246 ATXN1P54253 815 aaKnown RBP18.61■□□□□ 0.57
MSH6-207ENST00000456246 TBX4P57082 545 aa18.61■□□□□ 0.57
MSH6-207ENST00000456246 CREB5Q02930 508 aa18.61■□□□□ 0.57
MSH6-207ENST00000456246 PTK2Q05397 1052 aa18.61■□□□□ 0.57
MSH6-207ENST00000456246 MPP7Q5T2T1 576 aa18.61■□□□□ 0.57
MSH6-207ENST00000456246 DENND1BQ6P3S1 775 aa18.61■□□□□ 0.57
MSH6-207ENST00000456246 SLC36A4Q6YBV0 504 aa18.61■□□□□ 0.57
MSH6-207ENST00000456246 LPCAT2Q7L5N7 544 aa18.61■□□□□ 0.57
MSH6-207ENST00000456246 TMEM110Q86TL2 294 aa18.61■□□□□ 0.57
MSH6-207ENST00000456246 WFIKKN2Q8TEU8 576 aa18.61■□□□□ 0.57
MSH6-207ENST00000456246 IPO4Q8TEX9 1081 aaKnown RBP18.61■□□□□ 0.57
MSH6-207ENST00000456246 DDX1Q92499 740 aaKnown RBP18.61■□□□□ 0.57
MSH6-207ENST00000456246 FAM149B1Q96BN6 582 aa18.61■□□□□ 0.57
MSH6-207ENST00000456246 TMA16Q96EY4 203 aaKnown RBP18.61■□□□□ 0.57
MSH6-207ENST00000456246 PIWIL1Q96J94 861 aaKnown RBP18.61■□□□□ 0.57
MSH6-207ENST00000456246 TUBGCP2Q9BSJ2 902 aa18.61■□□□□ 0.57
MSH6-207ENST00000456246 SLC4A5Q9BY07 1137 aa18.61■□□□□ 0.57
MSH6-207ENST00000456246 LMBRD1Q9NUN5 540 aa18.61■□□□□ 0.57
MSH6-207ENST00000456246 BECN2A8MW95 431 aa18.6■□□□□ 0.57
MSH6-207ENST00000456246 MAP3K13O43283 966 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms