RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 LRRN4Q8WUT4 740 aa18.28■□□□□ 0.52
PTPN6-204ENST00000456013 TRAPPC12Q8WVT3 735 aa18.28■□□□□ 0.52
PTPN6-204ENST00000456013 KLRG1Q96E93 195 aa18.28■□□□□ 0.52
PTPN6-204ENST00000456013 GCOM2Q9BZD3 368 aaPredicted RBP18.28■□□□□ 0.52
PTPN6-204ENST00000456013 FAM124BQ9H5Z6 455 aaPredicted RBP18.28■□□□□ 0.52
PTPN6-204ENST00000456013 PEX10O60683 326 aa18.28■□□□□ 0.52
PTPN6-204ENST00000456013 TOMM70O94826 608 aa18.28■□□□□ 0.52
PTPN6-204ENST00000456013 ARIH2O95376 493 aa18.28■□□□□ 0.52
PTPN6-204ENST00000456013 SDC4P31431 198 aa18.28■□□□□ 0.52
PTPN6-204ENST00000456013 GMPSP49915 693 aaPredicted RBP18.28■□□□□ 0.52
PTPN6-204ENST00000456013 TNFAIP2Q03169 654 aa18.28■□□□□ 0.52
PTPN6-204ENST00000456013 SH3D19Q5HYK7 790 aa18.28■□□□□ 0.52
PTPN6-204ENST00000456013 AAGABQ6PD74 315 aa18.28■□□□□ 0.52
PTPN6-204ENST00000456013 IZUMO2Q6UXV1 221 aa18.28■□□□□ 0.52
PTPN6-204ENST00000456013 GALNT15Q8N3T1 639 aa18.28■□□□□ 0.52
PTPN6-204ENST00000456013 PIWIL2Q8TC59 973 aaKnown RBP18.28■□□□□ 0.52
PTPN6-204ENST00000456013 ACMSDQ8TDX5 336 aa18.28■□□□□ 0.52
PTPN6-204ENST00000456013 ECSITQ9BQ95 431 aa18.28■□□□□ 0.52
PTPN6-204ENST00000456013 PRMT7Q9NVM4 692 aaPredicted RBP18.28■□□□□ 0.52
PTPN6-204ENST00000456013 A0A088AWK7 358 aa18.27■□□□□ 0.52
PTPN6-204ENST00000456013 TOP3BO95985 862 aaKnown RBP18.27■□□□□ 0.52
PTPN6-204ENST00000456013 MCF2P10911 925 aa18.27■□□□□ 0.52
PTPN6-204ENST00000456013 CYP2F1P24903 491 aa18.27■□□□□ 0.52
PTPN6-204ENST00000456013 RGS7P49802 495 aa18.27■□□□□ 0.52
PTPN6-204ENST00000456013 ROR2Q01974 943 aaKnown RBP18.27■□□□□ 0.52
PTPN6-204ENST00000456013 STILQ15468 1287 aa18.27■□□□□ 0.52
PTPN6-204ENST00000456013 FOXB2Q5VYV0 432 aa18.27■□□□□ 0.52
PTPN6-204ENST00000456013 MBLAC2Q68D91 279 aa18.27■□□□□ 0.52
PTPN6-204ENST00000456013 CWF19L1Q69YN2 538 aaKnown RBP18.27■□□□□ 0.52
PTPN6-204ENST00000456013 EFCAB12Q6NXP0 572 aa18.27■□□□□ 0.52
PTPN6-204ENST00000456013 ADGRG6Q86SQ4 1221 aa18.27■□□□□ 0.52
PTPN6-204ENST00000456013 MFN1Q8IWA4 741 aa18.27■□□□□ 0.52
PTPN6-204ENST00000456013 TTC39CQ8N584 583 aa18.27■□□□□ 0.52
PTPN6-204ENST00000456013 PPP1R14CQ8TAE6 165 aa18.27■□□□□ 0.52
PTPN6-204ENST00000456013 KHSRPQ92945 711 aaKnown RBP eCLIP18.27■□□□□ 0.52
PTPN6-204ENST00000456013 ZNF778Q96MU6 729 aa18.27■□□□□ 0.52
PTPN6-204ENST00000456013 NT5C1AQ9BXI3 368 aa18.27■□□□□ 0.52
PTPN6-204ENST00000456013 ZSWIM8A7E2V4 1837 aa18.27■□□□□ 0.52
PTPN6-204ENST00000456013 NOP56O00567 594 aaKnown RBP18.27■□□□□ 0.52
PTPN6-204ENST00000456013 CLCN3P51790 818 aa18.27■□□□□ 0.52
PTPN6-204ENST00000456013 SLC6A3Q01959 620 aa18.27■□□□□ 0.52
PTPN6-204ENST00000456013 SEMA5AQ13591 1074 aa18.27■□□□□ 0.52
PTPN6-204ENST00000456013 PPP6R3Q5H9R7 873 aaPredicted RBP18.27■□□□□ 0.52
PTPN6-204ENST00000456013 STEAP4Q687X5 459 aa18.27■□□□□ 0.52
PTPN6-204ENST00000456013 MARK2Q7KZI7 788 aaKnown RBP18.27■□□□□ 0.52
PTPN6-204ENST00000456013 ZFAND2BQ8WV99 257 aa18.27■□□□□ 0.52
PTPN6-204ENST00000456013 TTC1Q99614 292 aa18.27■□□□□ 0.52
PTPN6-204ENST00000456013 NFKBIZQ9BYH8 718 aa18.27■□□□□ 0.52
PTPN6-204ENST00000456013 BTBD7Q9P203 1132 aa18.27■□□□□ 0.52
PTPN6-204ENST00000456013 ALDH1A2O94788 518 aa18.26■□□□□ 0.51
PTPN6-204ENST00000456013 KLHL2O95198 593 aa18.26■□□□□ 0.51
PTPN6-204ENST00000456013 LYNP07948 512 aa18.26■□□□□ 0.51
PTPN6-204ENST00000456013 C6orf222P0C671 652 aaPredicted RBP18.26■□□□□ 0.51
PTPN6-204ENST00000456013 FGF3P11487 239 aaPredicted RBP18.26■□□□□ 0.51
PTPN6-204ENST00000456013 DESP17661 470 aa18.26■□□□□ 0.51
PTPN6-204ENST00000456013 SLC10A2Q12908 348 aaPredicted RBP18.26■□□□□ 0.51
PTPN6-204ENST00000456013 HIC1Q14526 733 aa18.26■□□□□ 0.51
PTPN6-204ENST00000456013 FAM187BQ17R55 369 aa18.26■□□□□ 0.51
PTPN6-204ENST00000456013 GOLGA7BQ2TAP0 167 aa18.26■□□□□ 0.51
PTPN6-204ENST00000456013 RABGAP1LQ5R372 815 aa18.26■□□□□ 0.51
PTPN6-204ENST00000456013 CELF3Q5SZQ8 465 aaKnown RBP18.26■□□□□ 0.51
PTPN6-204ENST00000456013 TEDDM1Q5T9Z0 273 aa18.26■□□□□ 0.51
PTPN6-204ENST00000456013 PMF1Q6P1K2 205 aa18.26■□□□□ 0.51
PTPN6-204ENST00000456013 AFG1LQ8WV93 481 aa18.26■□□□□ 0.51
PTPN6-204ENST00000456013 APOL6Q9BWW8 343 aa18.26■□□□□ 0.51
PTPN6-204ENST00000456013 PDGFDQ9GZP0 370 aaPredicted RBP18.26■□□□□ 0.51
PTPN6-204ENST00000456013 FAM192AQ9GZU8 254 aa18.26■□□□□ 0.51
PTPN6-204ENST00000456013 EMCNQ9ULC0 261 aa18.26■□□□□ 0.51
PTPN6-204ENST00000456013 PPM1HQ9ULR3 514 aa18.26■□□□□ 0.51
PTPN6-204ENST00000456013 DNAJC16Q9Y2G8 782 aa18.26■□□□□ 0.51
PTPN6-204ENST00000456013 ITM2AO43736 263 aa18.26■□□□□ 0.51
PTPN6-204ENST00000456013 GLRA3O75311 464 aa18.26■□□□□ 0.51
PTPN6-204ENST00000456013 STAU1O95793 577 aaKnown RBP18.26■□□□□ 0.51
PTPN6-204ENST00000456013 BAG2O95816 211 aa18.26■□□□□ 0.51
PTPN6-204ENST00000456013 ZFXP17010 805 aaPredicted RBP18.26■□□□□ 0.51
PTPN6-204ENST00000456013 L1CAMP32004 1257 aa18.26■□□□□ 0.51
PTPN6-204ENST00000456013 GRIA1P42261 906 aa18.26■□□□□ 0.51
PTPN6-204ENST00000456013 HDAC4P56524 1084 aa18.26■□□□□ 0.51
PTPN6-204ENST00000456013 IRX4P78413 519 aa18.26■□□□□ 0.51
PTPN6-204ENST00000456013 GBE1Q04446 702 aa18.26■□□□□ 0.51
PTPN6-204ENST00000456013 SLC10A6Q3KNW5 377 aa18.26■□□□□ 0.51
PTPN6-204ENST00000456013 NOL9Q5SY16 702 aaKnown RBP18.26■□□□□ 0.51
PTPN6-204ENST00000456013 C12orf29Q8N999 325 aa18.26■□□□□ 0.51
PTPN6-204ENST00000456013 BUD23O43709 281 aaKnown RBP18.25■□□□□ 0.51
PTPN6-204ENST00000456013 LYPLA1O75608 230 aaPredicted RBP18.25■□□□□ 0.51
PTPN6-204ENST00000456013 SLC1A6P48664 564 aa18.25■□□□□ 0.51
PTPN6-204ENST00000456013 NR2C2P49116 596 aa18.25■□□□□ 0.51
PTPN6-204ENST00000456013 SARNPP82979 210 aaKnown RBP18.25■□□□□ 0.51
PTPN6-204ENST00000456013 TMEM132DQ14C87 1099 aa18.25■□□□□ 0.51
PTPN6-204ENST00000456013 DPYSL2Q16555 572 aa18.25■□□□□ 0.51
PTPN6-204ENST00000456013 PKDCCQ504Y2 493 aa18.25■□□□□ 0.51
PTPN6-204ENST00000456013 QKIQ96PU8 341 aaKnown RBP eCLIP18.25■□□□□ 0.51
PTPN6-204ENST00000456013 SLC4A5Q9BY07 1137 aa18.25■□□□□ 0.51
PTPN6-204ENST00000456013 IFT122Q9HBG6 1241 aa18.25■□□□□ 0.51
PTPN6-204ENST00000456013 ITGA11Q9UKX5 1188 aa18.25■□□□□ 0.51
PTPN6-204ENST00000456013 APOBEC2Q9Y235 224 aaKnown RBP18.25■□□□□ 0.51
PTPN6-204ENST00000456013 PTPRFP10586 1907 aa18.25■□□□□ 0.51
PTPN6-204ENST00000456013 MEI4A8MW99 385 aa18.25■□□□□ 0.51
PTPN6-204ENST00000456013 UBTFL6P0CB48 400 aaPredicted RBP18.25■□□□□ 0.51
PTPN6-204ENST00000456013 RPL10AP62906 217 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms