RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 HARS2P49590 506 aaKnown RBP18.09■□□□□ 0.49
USP39-208ENST00000455732 SNX16P57768 344 aa18.09■□□□□ 0.49
USP39-208ENST00000455732 NNTQ13423 1086 aa18.09■□□□□ 0.49
USP39-208ENST00000455732 ZSCAN23Q3MJ62 389 aa18.09■□□□□ 0.49
USP39-208ENST00000455732 PREPLQ4J6C6 727 aaPredicted RBP18.09■□□□□ 0.49
USP39-208ENST00000455732 HEATR6Q6AI08 1181 aaKnown RBP18.09■□□□□ 0.49
USP39-208ENST00000455732 ERMP1Q7Z2K6 904 aa18.09■□□□□ 0.49
USP39-208ENST00000455732 WDR5BQ86VZ2 330 aa18.09■□□□□ 0.49
USP39-208ENST00000455732 ZNF677Q86XU0 584 aa18.09■□□□□ 0.49
USP39-208ENST00000455732 SFTPA1Q8IWL2 248 aa18.09■□□□□ 0.49
USP39-208ENST00000455732 CPXM2Q8N436 756 aa18.09■□□□□ 0.49
USP39-208ENST00000455732 DCLK2Q8N568 766 aa18.09■□□□□ 0.49
USP39-208ENST00000455732 TMEM35BQ8NCS4 154 aa18.09■□□□□ 0.49
USP39-208ENST00000455732 NEK11Q8NG66 645 aa18.09■□□□□ 0.49
USP39-208ENST00000455732 USP33Q8TEY7 942 aa18.09■□□□□ 0.49
USP39-208ENST00000455732 FAM149B1Q96BN6 582 aa18.09■□□□□ 0.49
USP39-208ENST00000455732 ASNSD1Q9NWL6 643 aa18.09■□□□□ 0.49
USP39-208ENST00000455732 SFMBT1Q9UHJ3 866 aa18.09■□□□□ 0.49
USP39-208ENST00000455732 STOML2Q9UJZ1 356 aa18.09■□□□□ 0.49
USP39-208ENST00000455732 SLC8A2Q9UPR5 921 aa18.09■□□□□ 0.49
USP39-208ENST00000455732 CCDC163A0A0D9SF12 145 aa18.08■□□□□ 0.48
USP39-208ENST00000455732 KAT7O95251 611 aa18.08■□□□□ 0.48
USP39-208ENST00000455732 LSM8O95777 96 aaKnown RBP18.08■□□□□ 0.48
USP39-208ENST00000455732 NCAM1P13591 858 aa18.08■□□□□ 0.48
USP39-208ENST00000455732 SOX5P35711 763 aa18.08■□□□□ 0.48
USP39-208ENST00000455732 GRIA2P42262 883 aa18.08■□□□□ 0.48
USP39-208ENST00000455732 RING1Q06587 406 aa18.08■□□□□ 0.48
USP39-208ENST00000455732 ANO4Q32M45 955 aa18.08■□□□□ 0.48
USP39-208ENST00000455732 NOP9Q86U38 636 aaKnown RBP18.08■□□□□ 0.48
USP39-208ENST00000455732 DENND1CQ8IV53 801 aa18.08■□□□□ 0.48
USP39-208ENST00000455732 CAMKK1Q8N5S9 505 aa18.08■□□□□ 0.48
USP39-208ENST00000455732 DQX1Q8TE96 717 aaKnown RBP18.08■□□□□ 0.48
USP39-208ENST00000455732 IPO4Q8TEX9 1081 aaKnown RBP18.08■□□□□ 0.48
USP39-208ENST00000455732 ACDQ96AP0 544 aa18.08■□□□□ 0.48
USP39-208ENST00000455732 SERPINB11Q96P15 392 aa18.08■□□□□ 0.48
USP39-208ENST00000455732 SPAG5Q96R06 1193 aa18.08■□□□□ 0.48
USP39-208ENST00000455732 BBS2Q9BXC9 721 aa18.08■□□□□ 0.48
USP39-208ENST00000455732 POPDC2Q9HBU9 364 aa18.08■□□□□ 0.48
USP39-208ENST00000455732 RTN4Q9NQC3 1192 aaKnown RBP18.08■□□□□ 0.48
USP39-208ENST00000455732 ARHGEF4Q9NR80 690 aa18.08■□□□□ 0.48
USP39-208ENST00000455732 DEC1Q9P2X7 70 aa18.08■□□□□ 0.48
USP39-208ENST00000455732 TJP2Q9UDY2 1190 aa18.08■□□□□ 0.48
USP39-208ENST00000455732 NOCTQ9UK39 431 aaKnown RBP18.08■□□□□ 0.48
USP39-208ENST00000455732 NEDD8-MDP1E9PL57 170 aa18.07■□□□□ 0.48
USP39-208ENST00000455732 MSI1O43347 362 aaKnown RBP18.07■□□□□ 0.48
USP39-208ENST00000455732 TULP3O75386 442 aa18.07■□□□□ 0.48
USP39-208ENST00000455732 GFPT2O94808 682 aa18.07■□□□□ 0.48
USP39-208ENST00000455732 PENKP01210 267 aaPredicted RBP18.07■□□□□ 0.48
USP39-208ENST00000455732 APODP05090 189 aa18.07■□□□□ 0.48
USP39-208ENST00000455732 TYRP14679 529 aa18.07■□□□□ 0.48
USP39-208ENST00000455732 STAT1P42224 750 aa18.07■□□□□ 0.48
USP39-208ENST00000455732 ZNF445P59923 1031 aa18.07■□□□□ 0.48
USP39-208ENST00000455732 YWHAZP63104 245 aaKnown RBP18.07■□□□□ 0.48
USP39-208ENST00000455732 SRSF5Q13243 272 aaKnown RBP18.07■□□□□ 0.48
USP39-208ENST00000455732 DMC1Q14565 340 aa18.07■□□□□ 0.48
USP39-208ENST00000455732 PTPN20Q4JDL3 420 aa18.07■□□□□ 0.48
USP39-208ENST00000455732 NUGGCQ68CJ6 796 aa18.07■□□□□ 0.48
USP39-208ENST00000455732 TPGS1Q6ZTW0 290 aa18.07■□□□□ 0.48
USP39-208ENST00000455732 ZDHHC17Q8IUH5 632 aa18.07■□□□□ 0.48
USP39-208ENST00000455732 NAT16Q8N8M0 369 aa18.07■□□□□ 0.48
USP39-208ENST00000455732 PIWIL1Q96J94 861 aaKnown RBP18.07■□□□□ 0.48
USP39-208ENST00000455732 PCMTD1Q96MG8 357 aaPredicted RBP18.07■□□□□ 0.48
USP39-208ENST00000455732 XPO6Q96QU8 1125 aaKnown RBP18.07■□□□□ 0.48
USP39-208ENST00000455732 CBX8Q9HC52 389 aa18.07■□□□□ 0.48
USP39-208ENST00000455732 NLRC4Q9NPP4 1024 aa18.07■□□□□ 0.48
USP39-208ENST00000455732 NAALADL1Q9UQQ1 740 aa18.07■□□□□ 0.48
USP39-208ENST00000455732 A0A1B0GTH6 734 aa18.06■□□□□ 0.48
USP39-208ENST00000455732 GFRA2O00451 464 aa18.06■□□□□ 0.48
USP39-208ENST00000455732 HSF2BPO75031 334 aa18.06■□□□□ 0.48
USP39-208ENST00000455732 IGLV3-25P01717 112 aa18.06■□□□□ 0.48
USP39-208ENST00000455732 ERBB2P04626 1255 aa18.06■□□□□ 0.48
USP39-208ENST00000455732 TNFRSF4P43489 277 aa18.06■□□□□ 0.48
USP39-208ENST00000455732 KIR2DL1P43626 348 aaPredicted RBP18.06■□□□□ 0.48
USP39-208ENST00000455732 GABRB2P47870 512 aa18.06■□□□□ 0.48
USP39-208ENST00000455732 PXNP49023 591 aaPredicted RBP18.06■□□□□ 0.48
USP39-208ENST00000455732 SEC13P55735 322 aa18.06■□□□□ 0.48
USP39-208ENST00000455732 MRPS21P82921 87 aaKnown RBP18.06■□□□□ 0.48
USP39-208ENST00000455732 FILIP1LQ4L180 1135 aa18.06■□□□□ 0.48
USP39-208ENST00000455732 C2orf27AQ580R0 203 aa18.06■□□□□ 0.48
USP39-208ENST00000455732 EFHC1Q5JVL4 640 aa18.06■□□□□ 0.48
USP39-208ENST00000455732 FYB2Q5VWT5 728 aa18.06■□□□□ 0.48
USP39-208ENST00000455732 OLFML1Q6UWY5 402 aa18.06■□□□□ 0.48
USP39-208ENST00000455732 TOGARAM2Q6ZUX3 1019 aa18.06■□□□□ 0.48
USP39-208ENST00000455732 FAM183BPQ6ZVS7 135 aa18.06■□□□□ 0.48
USP39-208ENST00000455732 SLC26A9Q7LBE3 791 aa18.06■□□□□ 0.48
USP39-208ENST00000455732 UNC45BQ8IWX7 931 aa18.06■□□□□ 0.48
USP39-208ENST00000455732 TERB1Q8NA31 727 aa18.06■□□□□ 0.48
USP39-208ENST00000455732 AZIN2Q96A70 460 aa18.06■□□□□ 0.48
USP39-208ENST00000455732 SLC2A13Q96QE2 648 aa18.06■□□□□ 0.48
USP39-208ENST00000455732 HHIPQ96QV1 700 aa18.06■□□□□ 0.48
USP39-208ENST00000455732 PDCL3Q9H2J4 239 aa18.06■□□□□ 0.48
USP39-208ENST00000455732 FBXO10Q9UK96 956 aa18.06■□□□□ 0.48
USP39-208ENST00000455732 TLR6Q9Y2C9 796 aa18.06■□□□□ 0.48
USP39-208ENST00000455732 ABCA7Q8IZY2 2146 aa18.05■□□□□ 0.48
USP39-208ENST00000455732 A0A1W2PQC6 194 aa18.05■□□□□ 0.48
USP39-208ENST00000455732 CAPN9O14815 690 aa18.05■□□□□ 0.48
USP39-208ENST00000455732 TEX33O43247 280 aa18.05■□□□□ 0.48
USP39-208ENST00000455732 MMEP08473 750 aa18.05■□□□□ 0.48
USP39-208ENST00000455732 SCNN1AP37088 669 aa18.05■□□□□ 0.48
USP39-208ENST00000455732 TBX4P57082 545 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms