RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 VDRP11473 427 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 ENO3P13929 434 aaPredicted RBP11.53□□□□□ -0.56
DDR1-240ENST00000454612 SERPINB5P36952 375 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 NDUFV1P49821 464 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 SCNN1BP51168 640 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 PLK1P53350 603 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 TPI1P60174 286 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 TRIM42Q8IWZ5 723 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 PNPLA1Q8N8W4 532 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 GPRC5AQ8NFJ5 357 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 ZBED3Q96IU2 234 aaPredicted RBP11.53□□□□□ -0.56
DDR1-240ENST00000454612 NTPCRQ9BSD7 190 aaKnown RBP11.53□□□□□ -0.56
DDR1-240ENST00000454612 C20orf96Q9NUD7 363 aaPredicted RBP11.53□□□□□ -0.56
DDR1-240ENST00000454612 PRG3Q9Y2Y8 225 aaPredicted RBP11.53□□□□□ -0.56
DDR1-240ENST00000454612 MYO7AQ13402 2215 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 SDK1Q7Z5N4 2213 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 MSCO60682 206 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 GPC4O75487 556 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 KRT36O76013 467 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 B3GAT3O94766 335 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 EIF4BP23588 611 aaKnown RBP11.53□□□□□ -0.56
DDR1-240ENST00000454612 GRIK4Q16099 956 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 TAF12Q16514 161 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 ZNF618Q5T7W0 954 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 ZPBP2Q6X784 338 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 USP50Q70EL3 339 aaPredicted RBP11.53□□□□□ -0.56
DDR1-240ENST00000454612 PPWD1Q96BP3 646 aaKnown RBP11.53□□□□□ -0.56
DDR1-240ENST00000454612 PABPC5Q96DU9 382 aaKnown RBP11.53□□□□□ -0.56
DDR1-240ENST00000454612 CAB39LQ9H9S4 337 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 ARL8BQ9NVJ2 186 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 ZNF358Q9NW07 568 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 WDR35Q9P2L0 1181 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 BARX2Q9UMQ3 279 aaPredicted RBP11.53□□□□□ -0.56
DDR1-240ENST00000454612 AK5Q9Y6K8 562 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 KLHL33A6NCF5 533 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 EEF2KO00418 725 aaKnown RBP11.53□□□□□ -0.56
DDR1-240ENST00000454612 PAPSS1O43252 624 aaPredicted RBP11.53□□□□□ -0.56
DDR1-240ENST00000454612 TRUB2O95900 331 aaKnown RBP11.53□□□□□ -0.56
DDR1-240ENST00000454612 AP3M2P53677 418 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 TAP1Q03518 808 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 UBAP2LQ14157 1087 aaKnown RBP11.53□□□□□ -0.56
DDR1-240ENST00000454612 EFHC2Q5JST6 749 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 TCHHL1Q5QJ38 904 aaPredicted RBP11.53□□□□□ -0.56
DDR1-240ENST00000454612 VWA5B1Q5TIE3 1220 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 GRAMD4Q6IC98 578 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 B3GNT9Q6UX72 402 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 LBX2Q6XYB7 198 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 ERO1BQ86YB8 467 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 MPP5Q8N3R9 675 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 WDTC1Q8N5D0 677 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 SLC4A11Q8NBS3 891 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 SERAC1Q96JX3 654 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 IL1RL2Q9HB29 575 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 BFARQ9NZS9 450 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 CHKBQ9Y259 395 aa11.53□□□□□ -0.56
DDR1-240ENST00000454612 MAP3K7O43318 606 aa11.52□□□□□ -0.56
DDR1-240ENST00000454612 CRCPO75575 148 aa11.52□□□□□ -0.56
DDR1-240ENST00000454612 DNAJC8O75937 253 aaPredicted RBP11.52□□□□□ -0.56
DDR1-240ENST00000454612 SLC25A3Q00325 362 aa11.52□□□□□ -0.56
DDR1-240ENST00000454612 PLIN5Q00G26 463 aa11.52□□□□□ -0.56
DDR1-240ENST00000454612 BST1Q10588 318 aa11.52□□□□□ -0.56
DDR1-240ENST00000454612 C11orf91Q3C1V1 193 aa11.52□□□□□ -0.56
DDR1-240ENST00000454612 GNASQ5JWF2 1037 aa11.52□□□□□ -0.56
DDR1-240ENST00000454612 XYLT1Q86Y38 959 aa11.52□□□□□ -0.56
DDR1-240ENST00000454612 DNERQ8NFT8 737 aa11.52□□□□□ -0.56
DDR1-240ENST00000454612 DNAJC9Q8WXX5 260 aa11.52□□□□□ -0.56
DDR1-240ENST00000454612 NSL1Q96IY1 281 aa11.52□□□□□ -0.56
DDR1-240ENST00000454612 STRA6Q9BX79 667 aa11.52□□□□□ -0.56
DDR1-240ENST00000454612 MAFBQ9Y5Q3 323 aaPredicted RBP11.52□□□□□ -0.56
DDR1-240ENST00000454612 CXorf49A8MYA2 514 aaPredicted RBP11.52□□□□□ -0.57
DDR1-240ENST00000454612 PHGDHO43175 533 aaKnown RBP11.52□□□□□ -0.57
DDR1-240ENST00000454612 MGRN1O60291 552 aa11.52□□□□□ -0.57
DDR1-240ENST00000454612 SUPT3HO75486 399 aa11.52□□□□□ -0.57
DDR1-240ENST00000454612 TSPAN8P19075 237 aa11.52□□□□□ -0.57
DDR1-240ENST00000454612 MCL1Q07820 350 aa11.52□□□□□ -0.57
DDR1-240ENST00000454612 GRIK3Q13003 919 aa11.52□□□□□ -0.57
DDR1-240ENST00000454612 POU6F1Q14863 301 aa11.52□□□□□ -0.57
DDR1-240ENST00000454612 SLC10A6Q3KNW5 377 aa11.52□□□□□ -0.57
DDR1-240ENST00000454612 BOLA3Q53S33 107 aa11.52□□□□□ -0.57
DDR1-240ENST00000454612 N4BP2L1Q5TBK1 243 aaPredicted RBP11.52□□□□□ -0.57
DDR1-240ENST00000454612 SDHAF4Q5VUM1 108 aa11.52□□□□□ -0.57
DDR1-240ENST00000454612 RFWD3Q6PCD5 774 aa11.52□□□□□ -0.57
DDR1-240ENST00000454612 MFN1Q8IWA4 741 aa11.52□□□□□ -0.57
DDR1-240ENST00000454612 GALNT4Q8N4A0 578 aa11.52□□□□□ -0.57
DDR1-240ENST00000454612 EIF1ADQ8N9N8 165 aaKnown RBP11.52□□□□□ -0.57
DDR1-240ENST00000454612 FAM81AQ8TBF8 368 aa11.52□□□□□ -0.57
DDR1-240ENST00000454612 GRAMD1AQ96CP6 724 aa11.52□□□□□ -0.57
DDR1-240ENST00000454612 TMA16Q96EY4 203 aaKnown RBP11.52□□□□□ -0.57
DDR1-240ENST00000454612 PRR11Q96HE9 360 aaPredicted RBP11.52□□□□□ -0.57
DDR1-240ENST00000454612 TASP1Q9H6P5 420 aa11.52□□□□□ -0.57
DDR1-240ENST00000454612 GGA2Q9UJY4 613 aa11.52□□□□□ -0.57
DDR1-240ENST00000454612 CNTRLQ7Z7A1 2325 aa11.52□□□□□ -0.57
DDR1-240ENST00000454612 DYTNA2CJ06 578 aa11.52□□□□□ -0.57
DDR1-240ENST00000454612 ASB14A6NK59 587 aa11.52□□□□□ -0.57
DDR1-240ENST00000454612 ENDOD1O94919 500 aa11.52□□□□□ -0.57
DDR1-240ENST00000454612 USP17L7P0C7H9 530 aa11.52□□□□□ -0.57
DDR1-240ENST00000454612 STIP1P31948 543 aaKnown RBP11.52□□□□□ -0.57
DDR1-240ENST00000454612 XRCC4Q13426 336 aa11.52□□□□□ -0.57
DDR1-240ENST00000454612 ANKRD20A2Q5SQ80 823 aa11.52□□□□□ -0.57
DDR1-240ENST00000454612 ANKRD20A1Q5TYW2 823 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms