RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 KYAT1Q16773 422 aa12.37□□□□□ -0.43
SMPD4-213ENST00000454468 SDHAF4Q5VUM1 108 aa12.37□□□□□ -0.43
SMPD4-213ENST00000454468 IQSEC1Q6DN90 963 aa12.37□□□□□ -0.43
SMPD4-213ENST00000454468 RIBC1Q8N443 379 aaPredicted RBP12.37□□□□□ -0.43
SMPD4-213ENST00000454468 ATP2A3Q93084 1043 aa12.37□□□□□ -0.43
SMPD4-213ENST00000454468 SENP8Q96LD8 212 aa12.37□□□□□ -0.43
SMPD4-213ENST00000454468 PRDM12Q9H4Q4 367 aa12.37□□□□□ -0.43
SMPD4-213ENST00000454468 BHMG1C9JSJ3 638 aaPredicted RBP12.37□□□□□ -0.43
SMPD4-213ENST00000454468 GYG2O15488 501 aa12.37□□□□□ -0.43
SMPD4-213ENST00000454468 DCTN3O75935 186 aa12.37□□□□□ -0.43
SMPD4-213ENST00000454468 BAG2O95816 211 aa12.37□□□□□ -0.43
SMPD4-213ENST00000454468 BDNFP23560 247 aa12.37□□□□□ -0.43
SMPD4-213ENST00000454468 PCK1P35558 622 aa12.37□□□□□ -0.43
SMPD4-213ENST00000454468 MARCH8Q5T0T0 291 aa12.37□□□□□ -0.43
SMPD4-213ENST00000454468 ZNF410Q86VK4 478 aa12.37□□□□□ -0.43
SMPD4-213ENST00000454468 GBP7Q8N8V2 638 aaPredicted RBP12.37□□□□□ -0.43
SMPD4-213ENST00000454468 HTR3CQ8WXA8 447 aa12.37□□□□□ -0.43
SMPD4-213ENST00000454468 NRCAMQ92823 1304 aa12.37□□□□□ -0.43
SMPD4-213ENST00000454468 C5orf60A6NFR6 353 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 H3BRJ5 948 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 PTPN1P18031 435 aaKnown RBP12.36□□□□□ -0.43
SMPD4-213ENST00000454468 BRCC3P46736 316 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 PCSK7Q16549 785 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 FSCN1Q16658 493 aaKnown RBP12.36□□□□□ -0.43
SMPD4-213ENST00000454468 EFHC1Q5JVL4 640 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 SLC26A11Q86WA9 606 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 RASSF3Q86WH2 238 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 DCLK2Q8N568 766 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 UBR7Q8N806 425 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 ANKRD52Q8NB46 1076 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 CSPG4P5Q96PW8 444 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 KCTD15Q96SI1 283 aaPredicted RBP12.36□□□□□ -0.43
SMPD4-213ENST00000454468 SGIP1Q9BQI5 828 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 RXFP1Q9HBX9 757 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 PPME1Q9Y570 386 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 MYBPHLA2RUH7 354 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 ATP6V1G2O95670 118 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 JCHAINP01591 159 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 TKTP29401 623 aaKnown RBP12.36□□□□□ -0.43
SMPD4-213ENST00000454468 CA8P35219 290 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 LILRA4P59901 499 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 EMC10Q5UCC4 262 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 OLFML1Q6UWY5 402 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 RNF135Q8IUD6 432 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 N4BP2L2Q92802 583 aaPredicted RBP12.36□□□□□ -0.43
SMPD4-213ENST00000454468 SNX27Q96L92 541 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 TSPYL2Q9H2G4 693 aaPredicted RBP12.36□□□□□ -0.43
SMPD4-213ENST00000454468 PLEKHA5Q9HAU0 1116 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 CYP4F11Q9HBI6 524 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 GRID1Q9ULK0 1009 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 LOC100653049A0A140TA62 436 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 C3orf70A6NLC5 250 aaPredicted RBP12.36□□□□□ -0.43
SMPD4-213ENST00000454468 MFSD11O43934 449 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 KRT34O76011 436 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 ZWINTO95229 277 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 ASMTLO95671 621 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 PEX19P40855 299 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 PGGT1BP53609 377 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 NAIF1Q69YI7 327 aaPredicted RBP12.36□□□□□ -0.43
SMPD4-213ENST00000454468 NXNQ6DKJ4 435 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 TTC39CQ8N584 583 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 PQLC3Q8N755 202 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 NIPA2Q8N8Q9 360 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 CFAP61Q8NHU2 1237 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 FNIP1Q8TF40 1166 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 STMN2Q93045 179 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 TSNARE1Q96NA8 513 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 CDY2AQ9Y6F7 541 aa12.36□□□□□ -0.43
SMPD4-213ENST00000454468 THP07101 528 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 SERPINB4P48594 390 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 CLCNKBP51801 687 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 ANKRD20A2Q5SQ80 823 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 ANKRD20A1Q5TYW2 823 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 TTC39BQ5VTQ0 682 aaPredicted RBP12.35□□□□□ -0.43
SMPD4-213ENST00000454468 OR52K1Q8NGK4 314 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 RNF139Q8WU17 664 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 PTPRN2Q92932 1015 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 SYT15Q9BQS2 421 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 ST3GAL5Q9UNP4 418 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 PFKMP08237 780 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 GNAT1P11488 350 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 AVPR1AP37288 418 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 GRIK1P39086 918 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 GLRBP48167 497 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 CPT1AP50416 773 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 SLC10A2Q12908 348 aaPredicted RBP12.35□□□□□ -0.43
SMPD4-213ENST00000454468 UNC5AQ6ZN44 842 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 SHCBP1Q8NEM2 672 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 GPR152Q8TDT2 470 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 PPP4R1Q8TF05 950 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 CCDC124Q96CT7 223 aaKnown RBP12.35□□□□□ -0.43
SMPD4-213ENST00000454468 SGF29Q96ES7 293 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 RAB3IPQ96QF0 476 aaPredicted RBP12.35□□□□□ -0.43
SMPD4-213ENST00000454468 PTPN18Q99952 460 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 PAAF1Q9BRP4 392 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 TMEM120AQ9BXJ8 343 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 PPP1R12CQ9BZL4 782 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 TCRBV5S1A1TA0A578 114 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 ABHD2P08910 425 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 GCAP28676 217 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms