RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 HECTD1Q9ULT8 2610 aa6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 ARID1BQ8NFD5 2236 aaPredicted RBP6.3□□□□□ -1.4
HLA-DPA3-207ENST00000454398 A0A1B0GTW7 788 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 FAM221BA6H8Z2 402 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 PIK3R2O00459 728 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 BCAT2O15382 392 aaPredicted RBP6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 ZBTB24O43167 697 aaPredicted RBP6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 ACTN4O43707 911 aaKnown RBP6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 KLRC4O43908 158 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 SYNCRIPO60506 623 aaKnown RBP6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 ZNF217O75362 1048 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 STAU1O95793 577 aaKnown RBP6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 PENKP01210 267 aaPredicted RBP6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CALCAP01258 141 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 HOXD9P28356 352 aaPredicted RBP6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 ATICP31939 592 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 ACSL1P33121 698 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 ATP5C1P36542 298 aaKnown RBP6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 ME1P48163 572 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 PPP3CAQ08209 521 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CYP4F3Q08477 520 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 GOLGA8FQ08AF8 430 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 GOLGA8DPQ0D2H9 430 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 GOLGA7BQ2TAP0 167 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 HLA-BQ31612 363 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 ZACNQ401N2 412 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 FNDC3BQ53EP0 1204 aaKnown RBP6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 SPDYCQ5MJ68 293 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 WDR45BQ5MNZ6 344 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 PRAMEF14Q5SWL7 426 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 SYCP2LQ5T4T6 812 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 PPP1R26Q5T8A7 1209 aaPredicted RBP6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 SDE2Q6IQ49 451 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 DHRS13Q6UX07 377 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 SV2AQ7L0J3 742 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 RSRC2Q7L4I2 434 aaKnown RBP6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 GATAD2AQ86YP4 633 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 TMPRSS6Q8IU80 811 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 BAHD1Q8TBE0 780 aaPredicted RBP6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 PIP4K2CQ8TBX8 421 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 EDEM1Q92611 657 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 SIPA1Q96FS4 1042 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 ZNF419Q96HQ0 510 aaPredicted RBP6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 SLC6A18Q96N87 628 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 C7orf25Q9BPX7 421 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 NIF3L1Q9GZT8 377 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 FBXO44Q9H4M3 255 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 VRTNQ9H8Y1 702 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CSNK1G1Q9HCP0 422 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 TM7SF3Q9NS93 570 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 WSB2Q9NYS7 404 aaPredicted RBP6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 SERGEFQ9UGK8 458 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 SUSD2Q9UGT4 822 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 SERTAD1Q9UHV2 236 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 DNMT3LQ9UJW3 386 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 AGO1Q9UL18 857 aaKnown RBP6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 STARD13Q9Y3M8 1113 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 SNX11Q9Y5W9 270 aa6.29□□□□□ -1.4
HLA-DPA3-207ENST00000454398 NAV2Q8IVL1 2488 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 SLC12A8A0AV02 714 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 FAM47DPA6NHR8 397 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 H0Y626 953 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 H0Y8X5 98 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CUTAO60888 179 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 FSBPO95073 299 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 TRIM16O95361 564 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CER1O95813 267 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 GNSP15586 552 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 HLA-FP30511 346 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 DPP6P42658 865 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 MATKP42679 507 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 KIF11P52732 1056 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CLDN10P78369 228 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 INCA1Q0VD86 236 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 ADIGQ0VDE8 80 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 DNAJC3Q13217 504 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 KMT5BQ4FZB7 885 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 RFWD3Q6PCD5 774 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 BHLHA9Q7RTU4 235 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CCDC186Q7Z3E2 898 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 RABEPKQ7Z6M1 372 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 C12orf56Q8IXR9 622 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 SMYD4Q8IYR2 804 aaPredicted RBP6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 KIAA1958Q8N8K9 716 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 IQUBQ8NA54 791 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 C1orf216Q8TAB5 229 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 DDI1Q8WTU0 396 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 PRCCQ92733 491 aaPredicted RBP6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 SEMA4DQ92854 862 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 FOXJ1Q92949 421 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 TATDN2Q93075 761 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 MYEOVQ96EZ4 313 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CYFIP2Q96F07 1278 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 PIWIL1Q96J94 861 aaKnown RBP6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 ORAI3Q9BRQ5 295 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 ULBP1Q9BZM6 244 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 LHX5Q9H2C1 402 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 KCTD10Q9H3F6 313 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CUEDC2Q9H467 287 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 FAM124BQ9H5Z6 455 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms