RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 SF3A3Q12874 501 aaKnown RBP eCLIP4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 TP53BP2Q13625 1128 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 DCTN1Q14203 1278 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 PTPRRQ15256 657 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 CDC37Q16543 378 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 ZNF618Q5T7W0 954 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 TEDDM1Q5T9Z0 273 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 DGAT2L7PQ6IED9 249 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 GRHL2Q6ISB3 625 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 CCDC144NLQ6NUI1 221 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 SPATA31D1Q6ZQQ2 1576 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 RASGRP2Q7LDG7 609 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 C1orf210Q8IVY1 113 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 SYNE4Q8N205 404 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 TMEM57Q8N5G2 664 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 SLC22A17Q8WUG5 538 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 HTRA1Q92743 480 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 EXTL1Q92935 676 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 LENG9Q96B70 501 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 PTCD3Q96EY7 689 aaKnown RBP4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 PGBD1Q96JS3 809 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 COG8Q96MW5 612 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 MECRQ9BV79 373 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 ALG8Q9BVK2 526 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 KLC4Q9NSK0 619 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 LIN7CQ9NUP9 197 aaKnown RBP4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 TBCCD1Q9NVR7 557 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 DERAQ9Y315 318 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 TSC22D4Q9Y3Q8 395 aa4.25□□□□□ -1.73
HMGB1P15-201ENST00000453854 TSPOAP1O95153 1857 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 PEG3Q9GZU2 1588 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 CENPVL1A0A0U1RR11 272 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 FAM170AA1A519 330 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 UNC119BA6NIH7 251 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 M0QZQ0 153 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 PMPCBO75439 489 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 TJP3O95049 919 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 RPN1P04843 607 aaKnown RBP4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 RHOP08100 348 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 GKP32189 559 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 PRKG2Q13237 762 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 TOMM20Q15388 145 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 TBCCQ15814 346 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 CYP1B1Q16678 543 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 TBRG1Q3YBR2 411 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 CCDC184Q52MB2 194 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 TREML2Q5T2D2 321 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 FAAH2Q6GMR7 532 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 KRTAP5-3Q6L8H2 238 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 C1orf122Q6ZSJ8 110 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 TSPYL6Q8N831 410 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 USP38Q8NB14 1042 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 SLC2A12Q8TD20 617 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 RFKQ969G6 155 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 FKBP10Q96AY3 582 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 BRD8Q9H0E9 1235 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 OSBPL5Q9H0X9 879 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 NRDE2Q9H7Z3 1164 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 TMLHEQ9NVH6 421 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 KCTD5Q9NXV2 234 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 DKK3Q9UBP4 350 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 KCND3Q9UK17 655 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 FRMD4BQ9Y2L6 1034 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 URB2Q14146 1524 aaKnown RBP4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 ZNF608Q9ULD9 1512 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 FANCD2Q9BXW9 1451 aa4.24□□□□□ -1.73
HMGB1P15-201ENST00000453854 CLASP1Q7Z460 1538 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 CCDC196A0A1B0GTZ2 297 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 PIPSLA2A3N6 862 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 A6NLC8 198 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 PSMD9O00233 223 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 YY2O15391 372 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 SLPIP03973 132 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 FESP07332 822 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 C6P13671 934 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 XBP1P17861 261 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 RXRAP19793 462 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 DRD1P21728 446 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 RRM1P23921 792 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 PCSK6P29122 969 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 ELF1P32519 619 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 MCM5P33992 734 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 LIFRP42702 1097 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 GSTM5P46439 218 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 TERF1P54274 439 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 NR1H2P55055 460 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 MAPK7Q13164 816 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 TRPC3Q13507 836 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 DNASE1L3Q13609 305 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 RPS6KA2Q15349 733 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 DLGAP5Q15398 846 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 AAK1Q2M2I8 961 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 TIGD2Q4W5G0 525 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 USP39Q53GS9 565 aaKnown RBP4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 ABHD17BQ5VST6 288 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 SPATA1Q5VX52 437 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 CRIP3Q6Q6R5 217 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 C16orf54Q6UWD8 224 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 C4orf50Q6ZRC1 276 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 PCYOX1LQ8NBM8 494 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms