RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 H0YHG0 523 aa12.19□□□□□ -0.46
VTA1-203ENST00000452973 TRPA1O75762 1119 aa12.19□□□□□ -0.46
VTA1-203ENST00000452973 FAM155BO75949 473 aa12.19□□□□□ -0.46
VTA1-203ENST00000452973 AMHP03971 560 aa12.19□□□□□ -0.46
VTA1-203ENST00000452973 SP3Q02447 781 aa12.19□□□□□ -0.46
VTA1-203ENST00000452973 TMEM86AQ8N2M4 240 aa12.19□□□□□ -0.46
VTA1-203ENST00000452973 TFB1MQ8WVM0 346 aaKnown RBP12.19□□□□□ -0.46
VTA1-203ENST00000452973 SPOCK2Q92563 424 aa12.19□□□□□ -0.46
VTA1-203ENST00000452973 RNF34Q969K3 372 aa12.19□□□□□ -0.46
VTA1-203ENST00000452973 NPY6RQ99463 290 aa12.19□□□□□ -0.46
VTA1-203ENST00000452973 RASSF4Q9H2L5 321 aa12.19□□□□□ -0.46
VTA1-203ENST00000452973 A0A0U1RQF3 1178 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 CFAP69A5D8W1 941 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 C5orf60A6NFR6 353 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 E7ESA3 106 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 EEF2KO00418 725 aaKnown RBP12.18□□□□□ -0.46
VTA1-203ENST00000452973 CHADO15335 359 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 FYNP06241 537 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 ODC1P11926 461 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 ZFXP17010 805 aaPredicted RBP12.18□□□□□ -0.46
VTA1-203ENST00000452973 GBP2P32456 591 aaPredicted RBP12.18□□□□□ -0.46
VTA1-203ENST00000452973 WDR4P57081 412 aaKnown RBP12.18□□□□□ -0.46
VTA1-203ENST00000452973 DAOAP59103 153 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 SPRED3Q2MJR0 410 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 EFHC2Q5JST6 749 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 CASC4Q6P4E1 433 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 PRPF39Q86UA1 669 aaKnown RBP12.18□□□□□ -0.46
VTA1-203ENST00000452973 METTL23Q86XA0 190 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 ANKS4BQ8N8V4 417 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 STKLD1Q8NE28 680 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 NSRP1Q9H0G5 558 aaKnown RBP12.18□□□□□ -0.46
VTA1-203ENST00000452973 ACSS3Q9H6R3 686 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 ANLNQ9NQW6 1124 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 TMLHEQ9NVH6 421 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 ZC3H7BQ9UGR2 993 aaKnown RBP12.18□□□□□ -0.46
VTA1-203ENST00000452973 CAPN7Q9Y6W3 813 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 KCNK1O00180 336 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 VAV1P15498 845 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 PCSK1P29120 753 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 SCNN1AP37088 669 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 CRADDP78560 199 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 SEPT7Q16181 437 aaKnown RBP12.18□□□□□ -0.46
VTA1-203ENST00000452973 SPATS2Q86XZ4 545 aaKnown RBP12.18□□□□□ -0.46
VTA1-203ENST00000452973 PPM1NQ8N819 430 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 CKAP2Q8WWK9 683 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 HTR3CQ8WXA8 447 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 KCTD13Q8WZ19 329 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 ALG13Q9NP73 1137 aaKnown RBP12.18□□□□□ -0.46
VTA1-203ENST00000452973 CDH9Q9ULB4 789 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 ZMYND8Q9ULU4 1186 aaPredicted RBP12.18□□□□□ -0.46
VTA1-203ENST00000452973 TEX264Q9Y6I9 313 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 LTFP02788 710 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 OR4Q2P0C623 313 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 DNAJC3Q13217 504 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 KLHL38Q2WGJ6 581 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 C6orf89Q6UWU4 347 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 PPP1R21Q6ZMI0 780 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 CAND1Q86VP6 1230 aaKnown RBP12.18□□□□□ -0.46
VTA1-203ENST00000452973 MPP5Q8N3R9 675 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 SCAMP5Q8TAC9 235 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 SMARCD1Q96GM5 515 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 CYTH2Q99418 400 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 RTP3Q9BQQ7 232 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 SLC24A2Q9UI40 661 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 NUDT5Q9UKK9 219 aa12.18□□□□□ -0.46
VTA1-203ENST00000452973 H3BRJ5 948 aa12.17□□□□□ -0.46
VTA1-203ENST00000452973 CPP00450 1065 aa12.17□□□□□ -0.46
VTA1-203ENST00000452973 INHBAP08476 426 aa12.17□□□□□ -0.46
VTA1-203ENST00000452973 FOXN2P32314 431 aa12.17□□□□□ -0.46
VTA1-203ENST00000452973 RPL9P32969 192 aaKnown RBP12.17□□□□□ -0.46
VTA1-203ENST00000452973 MAGEA9P43362 315 aa12.17□□□□□ -0.46
VTA1-203ENST00000452973 NR2C2P49116 596 aa12.17□□□□□ -0.46
VTA1-203ENST00000452973 IL9RQ01113 521 aa12.17□□□□□ -0.46
VTA1-203ENST00000452973 ARCQ7LC44 396 aa12.17□□□□□ -0.46
VTA1-203ENST00000452973 LRRTM3Q86VH5 581 aa12.17□□□□□ -0.46
VTA1-203ENST00000452973 TDRPQ86YL5 185 aa12.17□□□□□ -0.46
VTA1-203ENST00000452973 CD99L2Q8TCZ2 262 aa12.17□□□□□ -0.46
VTA1-203ENST00000452973 DEPDC1BQ8WUY9 529 aa12.17□□□□□ -0.46
VTA1-203ENST00000452973 PRDM12Q9H4Q4 367 aa12.17□□□□□ -0.46
VTA1-203ENST00000452973 GPBP1L1Q9HC44 474 aaPredicted RBP12.17□□□□□ -0.46
VTA1-203ENST00000452973 MAGED2Q9UNF1 606 aaPredicted RBP12.17□□□□□ -0.46
VTA1-203ENST00000452973 I6L893 689 aaPredicted RBP12.17□□□□□ -0.46
VTA1-203ENST00000452973 ADRA1BP35368 520 aa12.17□□□□□ -0.46
VTA1-203ENST00000452973 ACLYP53396 1101 aa12.17□□□□□ -0.46
VTA1-203ENST00000452973 NR1H3Q13133 447 aa12.17□□□□□ -0.46
VTA1-203ENST00000452973 PTK7Q13308 1070 aa12.17□□□□□ -0.46
VTA1-203ENST00000452973 SLC1A5Q15758 541 aa12.17□□□□□ -0.46
VTA1-203ENST00000452973 ANKRD20A2Q5SQ80 823 aa12.17□□□□□ -0.46
VTA1-203ENST00000452973 ANKRD20A1Q5TYW2 823 aa12.17□□□□□ -0.46
VTA1-203ENST00000452973 HHATQ5VTY9 493 aa12.17□□□□□ -0.46
VTA1-203ENST00000452973 ANKRD20A3Q5VUR7 823 aa12.17□□□□□ -0.46
VTA1-203ENST00000452973 OVOS1Q6IE37 1185 aa12.17□□□□□ -0.46
VTA1-203ENST00000452973 RNF180Q86T96 592 aa12.17□□□□□ -0.46
VTA1-203ENST00000452973 PDCD7Q8N8D1 485 aaKnown RBP12.17□□□□□ -0.46
VTA1-203ENST00000452973 PCSK9Q8NBP7 692 aaKnown RBP12.17□□□□□ -0.46
VTA1-203ENST00000452973 KLHDC9Q8NEP7 349 aa12.17□□□□□ -0.46
VTA1-203ENST00000452973 OR10T2Q8NGX3 314 aa12.17□□□□□ -0.46
VTA1-203ENST00000452973 AGAP3Q96P47 875 aa12.17□□□□□ -0.46
VTA1-203ENST00000452973 PRG3Q9Y2Y8 225 aaPredicted RBP12.17□□□□□ -0.46
VTA1-203ENST00000452973 USP3Q9Y6I4 520 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms