RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 UNCXA6NJT0 531 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 MDM4O15151 490 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 RASSF9O75901 435 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 METTL18O95568 372 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 CTSHP09668 335 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 GRIA1P42261 906 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 CDC42EP1Q00587 391 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 MTFR1Q15390 333 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 TSNAXIP1Q2TAA8 658 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 DCAF6Q58WW2 860 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 CTU1Q7Z7A3 348 aaKnown RBP12.5□□□□□ -0.41
COL27A1-202ENST00000451716 IQCF2Q8IXL9 164 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 DEFB106AQ8N104 65 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 B3GALNT2Q8NCR0 500 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 STK32AQ8WU08 396 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 RSRC1Q96IZ7 334 aaKnown RBP12.5□□□□□ -0.41
COL27A1-202ENST00000451716 DHRS1Q96LJ7 313 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 AP5M1Q9H0R1 490 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 FAM124BQ9H5Z6 455 aaPredicted RBP12.5□□□□□ -0.41
COL27A1-202ENST00000451716 PAK5Q9P286 719 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 SLC17A7Q9P2U7 560 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 ARL2BPQ9Y2Y0 163 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 C17orf102A2RUQ5 167 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 HAS3O00219 553 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 PTGESO14684 152 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 GHRP10912 638 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 TGM2P21980 687 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 YWHAZP63104 245 aaKnown RBP12.5□□□□□ -0.41
COL27A1-202ENST00000451716 KCNT2Q6UVM3 1135 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 CAND1Q86VP6 1230 aaKnown RBP12.5□□□□□ -0.41
COL27A1-202ENST00000451716 FAM228AQ86W67 206 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 FUKQ8N0W3 1084 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 MZB1Q8WU39 189 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 ZNF560Q96MR9 790 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 CSPG4P5Q96PW8 444 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 ZNF670Q9BS34 389 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 C11orf84Q9BUA3 381 aaPredicted RBP12.5□□□□□ -0.41
COL27A1-202ENST00000451716 CEP41Q9BYV8 373 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 BATF3Q9NR55 127 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 PIH1D1Q9NWS0 290 aaKnown RBP12.5□□□□□ -0.41
COL27A1-202ENST00000451716 GDAP2Q9NXN4 497 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 PHTF1Q9UMS5 762 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 RABL2BQ9UNT1 228 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 SLC12A4Q9UP95 1085 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 SMG5Q9UPR3 1016 aaKnown RBP12.5□□□□□ -0.41
COL27A1-202ENST00000451716 TMEM98Q9Y2Y6 226 aa12.5□□□□□ -0.41
COL27A1-202ENST00000451716 A0A1B0GVG6 124 aa12.49□□□□□ -0.41
COL27A1-202ENST00000451716 C6orf222P0C671 652 aaPredicted RBP12.49□□□□□ -0.41
COL27A1-202ENST00000451716 NAT2P11245 290 aa12.49□□□□□ -0.41
COL27A1-202ENST00000451716 CPT1AP50416 773 aa12.49□□□□□ -0.41
COL27A1-202ENST00000451716 FKBP1BP68106 108 aa12.49□□□□□ -0.41
COL27A1-202ENST00000451716 FAAP100Q0VG06 881 aa12.49□□□□□ -0.41
COL27A1-202ENST00000451716 KLHL38Q2WGJ6 581 aa12.49□□□□□ -0.41
COL27A1-202ENST00000451716 PUS10Q3MIT2 529 aaKnown RBP12.49□□□□□ -0.41
COL27A1-202ENST00000451716 KIAA0319Q5VV43 1072 aa12.49□□□□□ -0.41
COL27A1-202ENST00000451716 SDCCAG8Q86SQ7 713 aaPredicted RBP12.49□□□□□ -0.41
COL27A1-202ENST00000451716 TBC1D1Q86TI0 1168 aaPredicted RBP12.49□□□□□ -0.41
COL27A1-202ENST00000451716 CTAGE3PQ8IX95 158 aa12.49□□□□□ -0.41
COL27A1-202ENST00000451716 TCP10LQ8TDR4 215 aa12.49□□□□□ -0.41
COL27A1-202ENST00000451716 LPPQ93052 612 aa12.49□□□□□ -0.41
COL27A1-202ENST00000451716 CYTH2Q99418 400 aa12.49□□□□□ -0.41
COL27A1-202ENST00000451716 DHRS4Q9BTZ2 278 aa12.49□□□□□ -0.41
COL27A1-202ENST00000451716 PRKAG3Q9UGI9 489 aa12.49□□□□□ -0.41
COL27A1-202ENST00000451716 CXorf49A8MYA2 514 aaPredicted RBP12.49□□□□□ -0.41
COL27A1-202ENST00000451716 CYB561D2O14569 222 aa12.49□□□□□ -0.41
COL27A1-202ENST00000451716 CHADO15335 359 aa12.49□□□□□ -0.41
COL27A1-202ENST00000451716 KCNE1P15382 129 aa12.49□□□□□ -0.41
COL27A1-202ENST00000451716 DESP17661 470 aa12.49□□□□□ -0.41
COL27A1-202ENST00000451716 PTPN9P43378 593 aa12.49□□□□□ -0.41
COL27A1-202ENST00000451716 CRYBB1P53674 252 aaPredicted RBP12.49□□□□□ -0.41
COL27A1-202ENST00000451716 PTK7Q13308 1070 aa12.49□□□□□ -0.41
COL27A1-202ENST00000451716 DPYSL2Q16555 572 aa12.49□□□□□ -0.41
COL27A1-202ENST00000451716 FSCN1Q16658 493 aaKnown RBP12.49□□□□□ -0.41
COL27A1-202ENST00000451716 ECHDC2Q86YB7 292 aa12.49□□□□□ -0.41
COL27A1-202ENST00000451716 ZDHHC17Q8IUH5 632 aa12.49□□□□□ -0.41
COL27A1-202ENST00000451716 MPP5Q8N3R9 675 aa12.49□□□□□ -0.41
COL27A1-202ENST00000451716 ADAM32Q8TC27 787 aa12.49□□□□□ -0.41
COL27A1-202ENST00000451716 LRRC8CQ8TDW0 803 aa12.49□□□□□ -0.41
COL27A1-202ENST00000451716 CENPIQ92674 756 aaPredicted RBP12.49□□□□□ -0.41
COL27A1-202ENST00000451716 SERAC1Q96JX3 654 aa12.49□□□□□ -0.41
COL27A1-202ENST00000451716 LGMNQ99538 433 aa12.49□□□□□ -0.41
COL27A1-202ENST00000451716 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.49□□□□□ -0.415e-8■■■■■ 57.9
COL27A1-202ENST00000451716 SENP1Q9P0U3 644 aa12.49□□□□□ -0.41
COL27A1-202ENST00000451716 TRIM33Q9UPN9 1127 aa12.49□□□□□ -0.41
COL27A1-202ENST00000451716 BCLAF3A2AJT9 711 aaKnown RBP12.48□□□□□ -0.41
COL27A1-202ENST00000451716 DCAF8L1A6NGE4 600 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 UGT1A9O60656 530 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 ATP2A2P16615 1042 aaKnown RBP12.48□□□□□ -0.41
COL27A1-202ENST00000451716 AXLP30530 894 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 SULT1E1P49888 294 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 ZNF157P51786 506 aaPredicted RBP12.48□□□□□ -0.41
COL27A1-202ENST00000451716 MAP3K7CLP57077 242 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 SNX16P57768 344 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 DEUP1Q05D60 604 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 NME3Q13232 169 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 SMAD1Q15797 465 aaKnown RBP12.48□□□□□ -0.41
COL27A1-202ENST00000451716 SV2CQ496J9 727 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 MDH1BQ5I0G3 518 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 SYPL2Q5VXT5 272 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 CYB5D1Q6P9G0 228 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms