RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 GPAA1O43292 621 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 MRPS14O60783 128 aaKnown RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 RNASEH2AO75792 299 aaKnown RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 PRKD3O94806 890 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 SEC24DO94855 1032 aaPredicted RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 GCNT3O95395 438 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 SERPINE1P05121 402 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 GSTT2P0CG29 244 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 GSTT2BP0CG30 244 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 NCAM1P13591 858 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 PCSK2P16519 638 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ZNF3P17036 446 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ATP2B4P23634 1241 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 NR2F2P24468 414 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 IL13P35225 146 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 HARS2P49590 506 aaKnown RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 CASP4P49662 377 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ITGA8P53708 1063 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 OR2B6P58173 313 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ERVK-9P63128 1117 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 RHAGQ02094 409 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 NR5A1Q13285 461 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 C1DQ13901 141 aaKnown RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 POLD3Q15054 466 aaPredicted RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 TSNQ15631 228 aaKnown RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 CHI3L2Q15782 390 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 EZH2Q15910 746 aaKnown RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 UGP2Q16851 508 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 GALNTL6Q49A17 601 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 PABPC1LQ4VXU2 614 aaKnown RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 METTL21CQ5VZV1 264 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 TCEAL6Q6IPX3 200 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 SPOPLQ6IQ16 392 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 CHSY1Q86X52 802 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 DHFR2Q86XF0 187 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 TMEM139Q8IV31 216 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 P3H2Q8IVL5 708 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 BBS7Q8IWZ6 715 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 HS6ST3Q8IZP7 471 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 RASGEF1CQ8N431 466 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 OR8K5Q8NH50 307 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 TEX47Q8TBZ9 253 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 RDH11Q8TC12 318 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 FAM45AQ8TCE6 357 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 FAR1Q8WVX9 515 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 NACC2Q96BF6 587 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 AP2M1Q96CW1 435 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 TSPAN17Q96FV3 270 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ZNF486Q96H40 463 aaPredicted RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 CNDP2Q96KP4 475 aaKnown RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 GCNAQ96QF7 691 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 YIPF2Q9BWQ6 316 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 APOL5Q9BWW9 433 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 PRRG3Q9BZD7 231 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 IRX2Q9BZI1 471 aaPredicted RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 CCSER1Q9C0I3 900 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 PCDH12Q9NPG4 1184 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 PRDM5Q9NQX1 630 aaPredicted RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 GDAP2Q9NXN4 497 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 MALT1Q9UDY8 824 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ACSL5Q9ULC5 683 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 PA2G4Q9UQ80 394 aaKnown RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 AURKCQ9UQB9 309 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 RAD54BQ9Y620 910 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 SPATA31A6Q5VVP1 1343 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ZSCAN5BA6NJL1 495 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 B4E1Z4 1266 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 HAX1O00165 279 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 WASLO00401 505 aaPredicted RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 CYP27B1O15528 508 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 SSX5O60225 188 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 FAM189A1O60320 539 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ITGA10O75578 1167 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 NOL4O94818 638 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 LDLRP01130 860 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 C8BP07358 591 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 NR3C2P08235 984 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 CLUP10909 449 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 UMPSP11172 480 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 IL7P13232 177 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 WARSP23381 471 aaKnown RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 NMT1P30419 496 aaKnown RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 MAPK12P53778 367 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 SLC5A3P53794 718 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 GABARAPL2P60520 117 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ACTR3P61158 418 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ROR1Q01973 937 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 SCN1BQ07699 218 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 STX4Q12846 297 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 DLG1Q12959 904 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 MMRN1Q13201 1228 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 IL18R1Q13478 541 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 AUHQ13825 339 aaKnown RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 NCF4Q15080 339 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 PUM3Q15397 648 aaKnown RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 TRIP4Q15650 581 aaPredicted RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 DDR2Q16832 855 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 FAM98BQ52LJ0 330 aaKnown RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 MTX3Q5HYI7 312 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 KCNT1Q5JUK3 1230 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms