RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 SELENONQ9NZV5 590 aa14.29□□□□□ -0.12
ITGB4-202ENST00000449880 KIAA1257Q9ULG3 409 aa14.29□□□□□ -0.12
ITGB4-202ENST00000449880 RGPD8O14715 1765 aaPredicted RBP14.29□□□□□ -0.12
ITGB4-202ENST00000449880 PDE2AO00408 941 aaPredicted RBP14.29□□□□□ -0.12
ITGB4-202ENST00000449880 PRRG1O14668 218 aa14.29□□□□□ -0.12
ITGB4-202ENST00000449880 HNRNPH3P31942 346 aaKnown RBP14.29□□□□□ -0.12
ITGB4-202ENST00000449880 SAMD7Q7Z3H4 446 aa14.29□□□□□ -0.12
ITGB4-202ENST00000449880 NANOGNBQ7Z5D8 188 aa14.29□□□□□ -0.12
ITGB4-202ENST00000449880 OR8H2Q8N162 312 aa14.29□□□□□ -0.12
ITGB4-202ENST00000449880 TAAR1Q96RJ0 339 aa14.29□□□□□ -0.12
ITGB4-202ENST00000449880 DUSP9Q99956 384 aaKnown RBP14.29□□□□□ -0.12
ITGB4-202ENST00000449880 FHDC1Q9C0D6 1143 aaPredicted RBP14.29□□□□□ -0.12
ITGB4-202ENST00000449880 UMODL1Q5DID0 1318 aa14.29□□□□□ -0.12
ITGB4-202ENST00000449880 RGS5O15539 181 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 CYTH3O43739 400 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 BNC1Q01954 994 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 TRAF3Q13114 568 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 ACVR2BQ13705 512 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 ART4Q93070 314 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 POP5Q969H6 163 aaKnown RBP14.28□□□□□ -0.12
ITGB4-202ENST00000449880 ZNF512Q96ME7 567 aaPredicted RBP14.28□□□□□ -0.12
ITGB4-202ENST00000449880 AGAP3Q96P47 875 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 OSBPL11Q9BXB4 747 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 CLCA2Q9UQC9 943 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 DRG1Q9Y295 367 aaKnown RBP14.28□□□□□ -0.12
ITGB4-202ENST00000449880 SIK3Q9Y2K2 1263 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 LMO7Q8WWI1 1683 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 NALCNQ8IZF0 1738 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.28□□□□□ -0.12
ITGB4-202ENST00000449880 TPST1O60507 370 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 KRT6BP04259 564 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 HOXA10P31260 410 aaPredicted RBP14.28□□□□□ -0.12
ITGB4-202ENST00000449880 KRT6CP48668 564 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 ZNF846Q147U1 533 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 PRAMEF18Q5VWM3 479 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 SLC25A41Q8N5S1 370 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 DCUN1D5Q9BTE7 237 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 NT5C1AQ9BXI3 368 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 NOL6Q9H6R4 1146 aaKnown RBP14.28□□□□□ -0.12
ITGB4-202ENST00000449880 STK39Q9UEW8 545 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 TMX2Q9Y320 296 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 RPS6KL1Q9Y6S9 549 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 FESP07332 822 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 ARHGEF7Q14155 803 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 MAPRE1Q15691 268 aaKnown RBP14.28□□□□□ -0.12
ITGB4-202ENST00000449880 SV2CQ496J9 727 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 LMBRD2Q68DH5 695 aaPredicted RBP14.28□□□□□ -0.12
ITGB4-202ENST00000449880 PGBD3Q8N328 593 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 TMEM143Q96AN5 459 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 FBXO28Q9NVF7 368 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 RUVBL2Q9Y230 463 aaKnown RBP14.28□□□□□ -0.12
ITGB4-202ENST00000449880 AAR2Q9Y312 384 aaKnown RBP14.28□□□□□ -0.12
ITGB4-202ENST00000449880 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.28□□□□□ -0.12
ITGB4-202ENST00000449880 ZMYM2Q9UBW7 1377 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 CTSHP09668 335 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 VAV1P15498 845 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 AKT1P31749 480 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 NCF4Q15080 339 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 SPDYAQ5MJ70 313 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 ARCQ7LC44 396 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 ATG4CQ96DT6 458 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 WDR12Q9GZL7 423 aaKnown RBP14.28□□□□□ -0.12
ITGB4-202ENST00000449880 DOLKQ9UPQ8 538 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 MGRN1O60291 552 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 DLG4P78352 724 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 GIT2Q14161 759 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 FAM45BPQ6NSW5 357 aa14.28□□□□□ -0.12
ITGB4-202ENST00000449880 CLEC4MQ9H2X3 399 aaPredicted RBP14.28□□□□□ -0.12
ITGB4-202ENST00000449880 DDX4Q9NQI0 724 aaKnown RBP14.28□□□□□ -0.12
ITGB4-202ENST00000449880 PRMT7Q9NVM4 692 aaPredicted RBP14.28□□□□□ -0.12
ITGB4-202ENST00000449880 TSR3Q9UJK0 312 aaKnown RBP14.28□□□□□ -0.12
ITGB4-202ENST00000449880 R3HDM2Q9Y2K5 976 aaKnown RBP14.28□□□□□ -0.12
ITGB4-202ENST00000449880 ARIH1Q9Y4X5 557 aaPredicted RBP14.28□□□□□ -0.12
ITGB4-202ENST00000449880 RARAP10276 462 aa14.27□□□□□ -0.12
ITGB4-202ENST00000449880 CDH3P22223 829 aa14.27□□□□□ -0.12
ITGB4-202ENST00000449880 SSTR3P32745 418 aaPredicted RBP14.27□□□□□ -0.12
ITGB4-202ENST00000449880 EMC2Q15006 297 aa14.27□□□□□ -0.12
ITGB4-202ENST00000449880 KCNT1Q5JUK3 1230 aa14.27□□□□□ -0.12
ITGB4-202ENST00000449880 TCHHL1Q5QJ38 904 aaPredicted RBP14.27□□□□□ -0.12
ITGB4-202ENST00000449880 IQCKQ8N0W5 287 aa14.27□□□□□ -0.12
ITGB4-202ENST00000449880 EID3Q8N140 333 aa14.27□□□□□ -0.12
ITGB4-202ENST00000449880 ST13P5Q8NFI4 369 aaPredicted RBP14.27□□□□□ -0.12
ITGB4-202ENST00000449880 HES6Q96HZ4 224 aa14.27□□□□□ -0.12
ITGB4-202ENST00000449880 SLC25A23Q9BV35 468 aa14.27□□□□□ -0.12
ITGB4-202ENST00000449880 UGT2B28Q9BY64 529 aa14.27□□□□□ -0.12
ITGB4-202ENST00000449880 TBX20Q9UMR3 447 aa14.27□□□□□ -0.12
ITGB4-202ENST00000449880 SH3BP1Q9Y3L3 701 aa14.27□□□□□ -0.12
ITGB4-202ENST00000449880 UQCRBP14927 111 aa14.27□□□□□ -0.12
ITGB4-202ENST00000449880 GARTP22102 1010 aa14.27□□□□□ -0.12
ITGB4-202ENST00000449880 BLVRAP53004 296 aa14.27□□□□□ -0.12
ITGB4-202ENST00000449880 PRKCEQ02156 737 aa14.27□□□□□ -0.12
ITGB4-202ENST00000449880 TRAF2Q12933 501 aa14.27□□□□□ -0.12
ITGB4-202ENST00000449880 NR1D2Q14995 579 aa14.27□□□□□ -0.12
ITGB4-202ENST00000449880 SPANXN2Q5MJ10 180 aa14.27□□□□□ -0.12
ITGB4-202ENST00000449880 RBM44Q6ZP01 1051 aaKnown RBP14.27□□□□□ -0.12
ITGB4-202ENST00000449880 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.27□□□□□ -0.12
ITGB4-202ENST00000449880 CHST13Q8NET6 341 aa14.27□□□□□ -0.12
ITGB4-202ENST00000449880 CYLDQ9NQC7 956 aa14.27□□□□□ -0.12
ITGB4-202ENST00000449880 NMRK1Q9NWW6 199 aa14.27□□□□□ -0.12
ITGB4-202ENST00000449880 USE1Q9NZ43 259 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms