RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 EGFL6Q8IUX8 553 aa10.28□□□□□ -0.76
CCDC171-203ENST00000449575 CCDC50Q8IVM0 306 aa10.28□□□□□ -0.76
CCDC171-203ENST00000449575 ADHFE1Q8IWW8 467 aa10.28□□□□□ -0.76
CCDC171-203ENST00000449575 SLC35F6Q8N357 371 aa10.28□□□□□ -0.76
CCDC171-203ENST00000449575 TDRD5Q8NAT2 981 aaKnown RBP10.28□□□□□ -0.76
CCDC171-203ENST00000449575 ADAM32Q8TC27 787 aa10.28□□□□□ -0.76
CCDC171-203ENST00000449575 USP13Q92995 863 aaPredicted RBP10.28□□□□□ -0.76
CCDC171-203ENST00000449575 C18orf8Q96DM3 657 aa10.28□□□□□ -0.76
CCDC171-203ENST00000449575 ZFRQ96KR1 1074 aaKnown RBP10.28□□□□□ -0.76
CCDC171-203ENST00000449575 SYNCQ9H7C4 482 aa10.28□□□□□ -0.76
CCDC171-203ENST00000449575 COMMD8Q9NX08 183 aa10.28□□□□□ -0.76
CCDC171-203ENST00000449575 SFMBT1Q9UHJ3 866 aa10.28□□□□□ -0.76
CCDC171-203ENST00000449575 MCM8Q9UJA3 840 aa10.28□□□□□ -0.76
CCDC171-203ENST00000449575 OPA1O60313 960 aa10.27□□□□□ -0.76
CCDC171-203ENST00000449575 OLFM2O95897 454 aa10.27□□□□□ -0.76
CCDC171-203ENST00000449575 LTFP02788 710 aa10.27□□□□□ -0.76
CCDC171-203ENST00000449575 CKMP06732 381 aa10.27□□□□□ -0.76
CCDC171-203ENST00000449575 ACADSBP45954 432 aa10.27□□□□□ -0.76
CCDC171-203ENST00000449575 NSFP46459 744 aaKnown RBP10.27□□□□□ -0.76
CCDC171-203ENST00000449575 PUS10Q3MIT2 529 aaKnown RBP10.27□□□□□ -0.76
CCDC171-203ENST00000449575 PREPLQ4J6C6 727 aaPredicted RBP10.27□□□□□ -0.76
CCDC171-203ENST00000449575 ACAD10Q6JQN1 1059 aa10.27□□□□□ -0.76
CCDC171-203ENST00000449575 CCDC70Q6NSX1 233 aa10.27□□□□□ -0.76
CCDC171-203ENST00000449575 TRIM72Q6ZMU5 477 aa10.27□□□□□ -0.76
CCDC171-203ENST00000449575 OTOP3Q7RTS5 596 aa10.27□□□□□ -0.76
CCDC171-203ENST00000449575 YTHDF3Q7Z739 585 aaKnown RBP10.27□□□□□ -0.76
CCDC171-203ENST00000449575 EMC1Q8N766 993 aa10.27□□□□□ -0.76
CCDC171-203ENST00000449575 ADAMTS19Q8TE59 1207 aa10.27□□□□□ -0.76
CCDC171-203ENST00000449575 OVCA2Q8WZ82 227 aa10.27□□□□□ -0.76
CCDC171-203ENST00000449575 NOX5Q96PH1 765 aa10.27□□□□□ -0.76
CCDC171-203ENST00000449575 PACSIN1Q9BY11 444 aa10.27□□□□□ -0.76
CCDC171-203ENST00000449575 IRX2Q9BZI1 471 aaPredicted RBP10.27□□□□□ -0.76
CCDC171-203ENST00000449575 NHEJ1Q9H9Q4 299 aaPredicted RBP10.27□□□□□ -0.76
CCDC171-203ENST00000449575 CYLDQ9NQC7 956 aa10.27□□□□□ -0.76
CCDC171-203ENST00000449575 EHD2Q9NZN4 543 aa10.27□□□□□ -0.76
CCDC171-203ENST00000449575 ADAM22Q9P0K1 906 aa10.27□□□□□ -0.76
CCDC171-203ENST00000449575 NENFQ9UMX5 172 aa10.27□□□□□ -0.76
CCDC171-203ENST00000449575 USTQ9Y2C2 406 aa10.27□□□□□ -0.76
CCDC171-203ENST00000449575 NUMBLQ9Y6R0 609 aa10.27□□□□□ -0.76
CCDC171-203ENST00000449575 ATG2BQ96BY7 2078 aa10.27□□□□□ -0.76
CCDC171-203ENST00000449575 WDFY4Q6ZS81 3184 aa10.27□□□□□ -0.77
CCDC171-203ENST00000449575 SOWAHDA6NJG2 315 aa10.27□□□□□ -0.77
CCDC171-203ENST00000449575 MSI1O43347 362 aaKnown RBP10.27□□□□□ -0.77
CCDC171-203ENST00000449575 FTLP02792 175 aaPredicted RBP10.27□□□□□ -0.77
CCDC171-203ENST00000449575 RRM1P23921 792 aa10.27□□□□□ -0.77
CCDC171-203ENST00000449575 IRX1P78414 480 aaPredicted RBP10.27□□□□□ -0.77
CCDC171-203ENST00000449575 SLC6A3Q01959 620 aa10.27□□□□□ -0.77
CCDC171-203ENST00000449575 CRYMQ14894 314 aa10.27□□□□□ -0.77
CCDC171-203ENST00000449575 RAB6CQ53S08 254 aa10.27□□□□□ -0.77
CCDC171-203ENST00000449575 HECTD3Q5T447 861 aa10.27□□□□□ -0.77
CCDC171-203ENST00000449575 PHF13Q86YI8 300 aaPredicted RBP10.27□□□□□ -0.77
CCDC171-203ENST00000449575 MIB1Q86YT6 1006 aa10.27□□□□□ -0.77
CCDC171-203ENST00000449575 TMTC1Q8IUR5 882 aa10.27□□□□□ -0.77
CCDC171-203ENST00000449575 MCOLN2Q8IZK6 566 aa10.27□□□□□ -0.77
CCDC171-203ENST00000449575 SCML4Q8N228 414 aa10.27□□□□□ -0.77
CCDC171-203ENST00000449575 PDZD8Q8NEN9 1154 aa10.27□□□□□ -0.77
CCDC171-203ENST00000449575 JOSD2Q8TAC2 188 aa10.27□□□□□ -0.77
CCDC171-203ENST00000449575 RUBCNQ92622 972 aa10.27□□□□□ -0.77
CCDC171-203ENST00000449575 RAB6CQ9H0N0 254 aa10.27□□□□□ -0.77
CCDC171-203ENST00000449575 GDE1Q9NZC3 331 aa10.27□□□□□ -0.77
CCDC171-203ENST00000449575 EPS15L1Q9UBC2 864 aa10.27□□□□□ -0.77
CCDC171-203ENST00000449575 TFR2Q9UP52 801 aa10.27□□□□□ -0.77
CCDC171-203ENST00000449575 CPQQ9Y646 472 aa10.27□□□□□ -0.77
CCDC171-203ENST00000449575 TCRBV5S1A1TA0A578 114 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 GOLGA6BA6NDN3 693 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 FGF19O95750 216 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 MBL2P11226 248 aaPredicted RBP10.26□□□□□ -0.77
CCDC171-203ENST00000449575 NCAM1P13591 858 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 FLT3P36888 993 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 AVPR1AP37288 418 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 GGCXP38435 758 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 EFEMP1Q12805 493 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 HTR4Q13639 388 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 GRM2Q14416 872 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 ARHGAP15Q53QZ3 475 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 C10orf120Q5SQS8 335 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 FAM102AQ5T9C2 384 aaPredicted RBP10.26□□□□□ -0.77
CCDC171-203ENST00000449575 TMCO4Q5TGY1 634 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 BTBD8Q5XKL5 378 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 VITQ6UXI7 678 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 DEFB106AQ8N104 65 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 SMARCD2Q92925 531 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 ACSF2Q96CM8 615 aaPredicted RBP10.26□□□□□ -0.77
CCDC171-203ENST00000449575 ZFYVE19Q96K21 471 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 KCNK12Q9HB15 430 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 METTL5Q9NRN9 209 aaKnown RBP10.26□□□□□ -0.77
CCDC171-203ENST00000449575 BZW2Q9Y6E2 419 aaKnown RBP10.26□□□□□ -0.77
CCDC171-203ENST00000449575 F5P12259 2224 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 TRAV19A0A0A6YYK7 116 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 C19orf67A6NJJ6 358 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 FBXO21O94952 628 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 HMBSP08397 361 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 IRF1P10914 325 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 ABCB4P21439 1286 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 FNTAP49354 379 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 RPL7AP62424 266 aaKnown RBP10.26□□□□□ -0.77
CCDC171-203ENST00000449575 YWHAZP63104 245 aaKnown RBP10.26□□□□□ -0.77
CCDC171-203ENST00000449575 GNGT1P63211 74 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 SKIDA1Q1XH10 827 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 ALKBH5Q6P6C2 394 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms