RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 C2orf16Q68DN1 1984 aa13.22□□□□□ -0.29
HLA-DRB9-201ENST00000449413 CTAGE15A4D2H0 777 aa13.22□□□□□ -0.29
HLA-DRB9-201ENST00000449413 H3BQ06 376 aaPredicted RBP13.22□□□□□ -0.29
HLA-DRB9-201ENST00000449413 C1RP00736 705 aa13.22□□□□□ -0.29
HLA-DRB9-201ENST00000449413 FGGP02679 453 aa13.22□□□□□ -0.29
HLA-DRB9-201ENST00000449413 CTAGE8P0CG41 777 aa13.22□□□□□ -0.29
HLA-DRB9-201ENST00000449413 RARAP10276 462 aa13.22□□□□□ -0.29
HLA-DRB9-201ENST00000449413 RALAP11233 206 aa13.22□□□□□ -0.29
HLA-DRB9-201ENST00000449413 RARGP13631 454 aa13.22□□□□□ -0.29
HLA-DRB9-201ENST00000449413 PTPN7P35236 360 aa13.22□□□□□ -0.29
HLA-DRB9-201ENST00000449413 PPP2R5EQ16537 467 aa13.22□□□□□ -0.29
HLA-DRB9-201ENST00000449413 ATP13A4Q4VNC1 1196 aa13.22□□□□□ -0.29
HLA-DRB9-201ENST00000449413 ODF2Q5BJF6 829 aa13.22□□□□□ -0.29
HLA-DRB9-201ENST00000449413 KCNT1Q5JUK3 1230 aa13.22□□□□□ -0.29
HLA-DRB9-201ENST00000449413 RSRC2Q7L4I2 434 aaKnown RBP13.22□□□□□ -0.29
HLA-DRB9-201ENST00000449413 CTAGE6Q86UF2 777 aa13.22□□□□□ -0.29
HLA-DRB9-201ENST00000449413 CTAGE4Q8IX94 777 aa13.22□□□□□ -0.29
HLA-DRB9-201ENST00000449413 LRRN4CLQ8ND94 238 aa13.22□□□□□ -0.29
HLA-DRB9-201ENST00000449413 PRSS33Q8NF86 280 aa13.22□□□□□ -0.29
HLA-DRB9-201ENST00000449413 CASP10Q92851 521 aa13.22□□□□□ -0.29
HLA-DRB9-201ENST00000449413 NTAN1Q96AB6 310 aa13.22□□□□□ -0.29
HLA-DRB9-201ENST00000449413 RPGRIP1Q96KN7 1286 aa13.22□□□□□ -0.29
HLA-DRB9-201ENST00000449413 SERPINB11Q96P15 392 aa13.22□□□□□ -0.29
HLA-DRB9-201ENST00000449413 NAP1L3Q99457 506 aaPredicted RBP13.22□□□□□ -0.29
HLA-DRB9-201ENST00000449413 WDR6Q9NNW5 1121 aaKnown RBP13.22□□□□□ -0.29
HLA-DRB9-201ENST00000449413 MAN1C1Q9NR34 630 aa13.22□□□□□ -0.29
HLA-DRB9-201ENST00000449413 GPATCH2LQ9NWQ4 482 aa13.22□□□□□ -0.29
HLA-DRB9-201ENST00000449413 UXTQ9UBK9 157 aaPredicted RBP13.22□□□□□ -0.29
HLA-DRB9-201ENST00000449413 AP4E1Q9UPM8 1137 aa13.22□□□□□ -0.29
HLA-DRB9-201ENST00000449413 ASB3Q9Y575 518 aa13.22□□□□□ -0.29
HLA-DRB9-201ENST00000449413 NUP210Q8TEM1 1887 aaPredicted RBP13.22□□□□□ -0.29
HLA-DRB9-201ENST00000449413 MSI1O43347 362 aaKnown RBP13.21□□□□□ -0.29
HLA-DRB9-201ENST00000449413 CLASP2O75122 1294 aaKnown RBP13.21□□□□□ -0.29
HLA-DRB9-201ENST00000449413 ZRANB2O95218 330 aaKnown RBP eCLIP13.21□□□□□ -0.29
HLA-DRB9-201ENST00000449413 GBP1P32455 592 aa13.21□□□□□ -0.29
HLA-DRB9-201ENST00000449413 CETN2P41208 172 aa13.21□□□□□ -0.29
HLA-DRB9-201ENST00000449413 AIF1P55008 147 aa13.21□□□□□ -0.29
HLA-DRB9-201ENST00000449413 COPS2P61201 443 aa13.21□□□□□ -0.29
HLA-DRB9-201ENST00000449413 ITIH3Q06033 890 aa13.21□□□□□ -0.29
HLA-DRB9-201ENST00000449413 C2orf54Q08AI8 447 aa13.21□□□□□ -0.29
HLA-DRB9-201ENST00000449413 NNTQ13423 1086 aa13.21□□□□□ -0.29
HLA-DRB9-201ENST00000449413 COL19A1Q14993 1142 aa13.21□□□□□ -0.29
HLA-DRB9-201ENST00000449413 DPYSL2Q16555 572 aa13.21□□□□□ -0.29
HLA-DRB9-201ENST00000449413 LONRF2Q1L5Z9 754 aa13.21□□□□□ -0.29
HLA-DRB9-201ENST00000449413 PPM1LQ5SGD2 360 aa13.21□□□□□ -0.29
HLA-DRB9-201ENST00000449413 MFSD7Q6UXD7 560 aa13.21□□□□□ -0.29
HLA-DRB9-201ENST00000449413 SPOCD1Q6ZMY3 1216 aa13.21□□□□□ -0.29
HLA-DRB9-201ENST00000449413 SND1Q7KZF4 910 aaKnown RBP eCLIP13.21□□□□□ -0.29
HLA-DRB9-201ENST00000449413 RCOR2Q8IZ40 523 aa13.21□□□□□ -0.29
HLA-DRB9-201ENST00000449413 ELMOD1Q8N336 334 aa13.21□□□□□ -0.29
HLA-DRB9-201ENST00000449413 RAPGEF5Q92565 580 aa13.21□□□□□ -0.29
HLA-DRB9-201ENST00000449413 RNF25Q96BH1 459 aaPredicted RBP13.21□□□□□ -0.29
HLA-DRB9-201ENST00000449413 PABPC5Q96DU9 382 aaKnown RBP13.21□□□□□ -0.29
HLA-DRB9-201ENST00000449413 MRPL38Q96DV4 380 aaKnown RBP13.21□□□□□ -0.29
HLA-DRB9-201ENST00000449413 ZNF512Q96ME7 567 aaPredicted RBP13.21□□□□□ -0.29
HLA-DRB9-201ENST00000449413 CDK5RAP1Q96SZ6 601 aaKnown RBP13.21□□□□□ -0.29
HLA-DRB9-201ENST00000449413 ZNF334Q9HCZ1 680 aaPredicted RBP13.21□□□□□ -0.29
HLA-DRB9-201ENST00000449413 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.21□□□□□ -0.29
HLA-DRB9-201ENST00000449413 FZD10Q9ULW2 581 aa13.21□□□□□ -0.29
HLA-DRB9-201ENST00000449413 RIF1Q5UIP0 2472 aaKnown RBP13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 hCG_1818297A0A087WSY0 165 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 C3orf70A6NLC5 250 aaPredicted RBP13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 TLR5O60602 858 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 F9P00740 461 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 EPCAMP16422 314 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 KDELR1P24390 212 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 HOXA9P31269 272 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 CDKN2BP42772 138 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 CXCR3P49682 368 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 TUBP50607 506 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 ARSEP51690 589 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 CDH6P55285 790 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 SCAPQ12770 1279 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 EFEMP1Q12805 493 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 EIF4EBP2Q13542 120 aaPredicted RBP13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 DPYSL3Q14195 570 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 KRT81Q14533 505 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 CA9Q16790 459 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 BOLA3Q53S33 107 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 ZC3H12AQ5D1E8 599 aaKnown RBP13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 TFDP3Q5H9I0 405 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 EFHC2Q5JST6 749 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 ERMARDQ5T6L9 678 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 SNX30Q5VWJ9 437 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 RTL10Q7L3V2 364 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 BMP8AQ7Z5Y6 402 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 ADGRD2Q7Z7M1 963 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 TADA2BQ86TJ2 420 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 SLC13A5Q86YT5 568 aaPredicted RBP13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 TMC8Q8IU68 726 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 PSTKQ8IV42 348 aaKnown RBP13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 FAM71BQ8TC56 605 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 HERPUD2Q9BSE4 406 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 OSBPL8Q9BZF1 889 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 PLEKHA4Q9H4M7 779 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 CCSER2Q9H7U1 834 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 PCDH18Q9HCL0 1135 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 TRPM5Q9NZQ8 1165 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 RASAL2Q9UJF2 1139 aa13.2□□□□□ -0.3
HLA-DRB9-201ENST00000449413 NUDT5Q9UKK9 219 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms