RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 MAD1L1Q9Y6D9 718 aa17.51■□□□□ 0.39
TOM1-210ENST00000449058 PDGFRBP09619 1106 aa17.5■□□□□ 0.39
TOM1-210ENST00000449058 LMO2P25791 158 aa17.5■□□□□ 0.39
TOM1-210ENST00000449058 GNL1P36915 607 aaPredicted RBP17.5■□□□□ 0.39
TOM1-210ENST00000449058 CDC42EP1Q00587 391 aa17.5■□□□□ 0.39
TOM1-210ENST00000449058 HEATR6Q6AI08 1181 aaKnown RBP17.5■□□□□ 0.39
TOM1-210ENST00000449058 LIMS2Q7Z4I7 341 aa17.5■□□□□ 0.39
TOM1-210ENST00000449058 ENDOVQ8N8Q3 282 aaKnown RBP17.5■□□□□ 0.39
TOM1-210ENST00000449058 OR6J1Q8NGC5 347 aa17.5■□□□□ 0.39
TOM1-210ENST00000449058 NSL1Q96IY1 281 aa17.5■□□□□ 0.39
TOM1-210ENST00000449058 HSFY1Q96LI6 401 aa17.5■□□□□ 0.39
TOM1-210ENST00000449058 ZNF570Q96NI8 536 aa17.5■□□□□ 0.39
TOM1-210ENST00000449058 FAM49AQ9H0Q0 323 aaPredicted RBP17.5■□□□□ 0.39
TOM1-210ENST00000449058 FBXO6Q9NRD1 293 aaPredicted RBP17.5■□□□□ 0.39
TOM1-210ENST00000449058 SLC5A4Q9NY91 659 aa17.5■□□□□ 0.39
TOM1-210ENST00000449058 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.5■□□□□ 0.39
TOM1-210ENST00000449058 MOCS1Q9NZB8 636 aa17.5■□□□□ 0.39
TOM1-210ENST00000449058 DCAF8L1A6NGE4 600 aa17.5■□□□□ 0.39
TOM1-210ENST00000449058 HACD1B0YJ81 288 aa17.5■□□□□ 0.39
TOM1-210ENST00000449058 SPTLC1O15269 473 aa17.5■□□□□ 0.39
TOM1-210ENST00000449058 AMPD1P23109 780 aa17.5■□□□□ 0.39
TOM1-210ENST00000449058 GRIA1P42261 906 aa17.5■□□□□ 0.39
TOM1-210ENST00000449058 SERPINB9P50453 376 aa17.5■□□□□ 0.39
TOM1-210ENST00000449058 PCBP1Q15365 356 aaKnown RBP eCLIP17.5■□□□□ 0.39
TOM1-210ENST00000449058 NBPF20Q3BBV1 942 aa17.5■□□□□ 0.39
TOM1-210ENST00000449058 PRR11Q96HE9 360 aaPredicted RBP17.5■□□□□ 0.39
TOM1-210ENST00000449058 BTBD10Q9BSF8 475 aa17.5■□□□□ 0.39
TOM1-210ENST00000449058 MECRQ9BV79 373 aa17.5■□□□□ 0.39
TOM1-210ENST00000449058 CADM1Q9BY67 442 aaKnown RBP17.5■□□□□ 0.39
TOM1-210ENST00000449058 DENND2DQ9H6A0 471 aaPredicted RBP17.5■□□□□ 0.39
TOM1-210ENST00000449058 RCOR3Q9P2K3 495 aaPredicted RBP17.5■□□□□ 0.39
TOM1-210ENST00000449058 KPNA7A9QM74 516 aa17.49■□□□□ 0.39
TOM1-210ENST00000449058 E7ENQ6 273 aa17.49■□□□□ 0.39
TOM1-210ENST00000449058 PDHXO00330 501 aa17.49■□□□□ 0.39
TOM1-210ENST00000449058 CD4P01730 458 aa17.49■□□□□ 0.39
TOM1-210ENST00000449058 MYL2P10916 166 aa17.49■□□□□ 0.39
TOM1-210ENST00000449058 DARSP14868 501 aaKnown RBP17.49■□□□□ 0.39
TOM1-210ENST00000449058 VAV1P15498 845 aa17.49■□□□□ 0.39
TOM1-210ENST00000449058 ANKRD20A2Q5SQ80 823 aa17.49■□□□□ 0.39
TOM1-210ENST00000449058 ANKRD20A1Q5TYW2 823 aa17.49■□□□□ 0.39
TOM1-210ENST00000449058 ANKRD20A3Q5VUR7 823 aa17.49■□□□□ 0.39
TOM1-210ENST00000449058 CES4AQ5XG92 561 aa17.49■□□□□ 0.39
TOM1-210ENST00000449058 STEAP4Q687X5 459 aa17.49■□□□□ 0.39
TOM1-210ENST00000449058 TIFABQ6ZNK6 161 aa17.49■□□□□ 0.39
TOM1-210ENST00000449058 CCDC33Q8N5R6 958 aa17.49■□□□□ 0.39
TOM1-210ENST00000449058 MAB21L3Q8N8X9 362 aa17.49■□□□□ 0.39
TOM1-210ENST00000449058 ARMC2Q8NEN0 867 aa17.49■□□□□ 0.39
TOM1-210ENST00000449058 TFB1MQ8WVM0 346 aaKnown RBP17.49■□□□□ 0.39
TOM1-210ENST00000449058 HTR3CQ8WXA8 447 aa17.49■□□□□ 0.39
TOM1-210ENST00000449058 OSMRQ99650 979 aa17.49■□□□□ 0.39
TOM1-210ENST00000449058 RNF19AQ9NV58 838 aa17.49■□□□□ 0.39
TOM1-210ENST00000449058 MORF4L1Q9UBU8 362 aa17.49■□□□□ 0.39
TOM1-210ENST00000449058 MFHAS1Q9Y4C4 1052 aa17.49■□□□□ 0.39
TOM1-210ENST00000449058 A0A0A0MRY4 1105 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 FAM237BA0A1B0GVD1 139 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 MLNP12872 115 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 GOT1P17174 413 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 CRHR1P34998 444 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 MATKP42679 507 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 SLC8A3P57103 927 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 OCRLQ01968 901 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 ZBTB16Q05516 673 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 BST1Q10588 318 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 TEX44Q53QW1 395 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 ATG16L1Q676U5 607 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 PYROXD2Q8N2H3 581 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 RAB3IL1Q8TBN0 382 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 SLC2A14Q8TDB8 520 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 E2F7Q96AV8 911 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 SPATA13Q96N96 652 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 ANKRD27Q96NW4 1050 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 SLC13A1Q9BZW2 595 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 PRDM16Q9HAZ2 1276 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 KCNK4Q9NYG8 393 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 FZD10Q9ULW2 581 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 SLC45A1Q9Y2W3 748 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 ZNF638Q14966 1978 aaKnown RBP17.48■□□□□ 0.39
TOM1-210ENST00000449058 SMIM28A0A1B0GU29 152 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 C2orf71A6NGG8 1288 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 I3L4J1 428 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 ADCY6O43306 1168 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 CAPN15O75808 1086 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 ALDH1A2O94788 518 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 TPBGLP0DKB5 382 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 AKAP5P24588 427 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 FDFT1P37268 417 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 EFHC1Q5JVL4 640 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 ZNF618Q5T7W0 954 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 PSTKQ8IV42 348 aaKnown RBP17.48■□□□□ 0.39
TOM1-210ENST00000449058 SLC10A4Q96EP9 437 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 MAML3Q96JK9 1138 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 ZNF560Q96MR9 790 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 NUDCD1Q96RS6 583 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 SNX25Q9H3E2 840 aa17.48■□□□□ 0.39
TOM1-210ENST00000449058 FCHO1O14526 889 aa17.47■□□□□ 0.39
TOM1-210ENST00000449058 CNTFP26441 200 aa17.47■□□□□ 0.39
TOM1-210ENST00000449058 SARNPP82979 210 aaKnown RBP17.47■□□□□ 0.39
TOM1-210ENST00000449058 CDK18Q07002 472 aa17.47■□□□□ 0.39
TOM1-210ENST00000449058 SLC25A52Q3SY17 297 aa17.47■□□□□ 0.39
TOM1-210ENST00000449058 HSF5Q4G112 596 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms