RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 KBTBD6Q86V97 674 aa15.24■□□□□ 0.03
USP39-206ENST00000448971 SLC47A2Q86VL8 602 aa15.24■□□□□ 0.03
USP39-206ENST00000448971 BBS7Q8IWZ6 715 aa15.24■□□□□ 0.03
USP39-206ENST00000448971 ABCA7Q8IZY2 2146 aa15.24■□□□□ 0.03
USP39-206ENST00000448971 SCML4Q8N228 414 aa15.24■□□□□ 0.03
USP39-206ENST00000448971 KIAA1958Q8N8K9 716 aa15.24■□□□□ 0.03
USP39-206ENST00000448971 C1orf131Q8NDD1 294 aaKnown RBP15.24■□□□□ 0.03
USP39-206ENST00000448971 NEK11Q8NG66 645 aa15.24■□□□□ 0.03
USP39-206ENST00000448971 IPO4Q8TEX9 1081 aaKnown RBP15.24■□□□□ 0.03
USP39-206ENST00000448971 CLEC4CQ8WTT0 213 aa15.24■□□□□ 0.03
USP39-206ENST00000448971 EDEM1Q92611 657 aa15.24■□□□□ 0.03
USP39-206ENST00000448971 FAM149B1Q96BN6 582 aa15.24■□□□□ 0.03
USP39-206ENST00000448971 OTUB2Q96DC9 234 aa15.24■□□□□ 0.03
USP39-206ENST00000448971 NOX5Q96PH1 765 aa15.24■□□□□ 0.03
USP39-206ENST00000448971 KLF16Q9BXK1 252 aaPredicted RBP15.24■□□□□ 0.03
USP39-206ENST00000448971 LINC00597Q9H2U6 94 aa15.24■□□□□ 0.03
USP39-206ENST00000448971 NLRC4Q9NPP4 1024 aa15.24■□□□□ 0.03
USP39-206ENST00000448971 MARCH2Q9P0N8 246 aa15.24■□□□□ 0.03
USP39-206ENST00000448971 ZZEF1O43149 2961 aa15.24■□□□□ 0.03
USP39-206ENST00000448971 SLC12A8A0AV02 714 aa15.23■□□□□ 0.03
USP39-206ENST00000448971 RPP40O75818 363 aaKnown RBP15.23■□□□□ 0.03
USP39-206ENST00000448971 EPN2O95208 641 aa15.23■□□□□ 0.03
USP39-206ENST00000448971 CLCN1P35523 988 aa15.23■□□□□ 0.03
USP39-206ENST00000448971 SHC2P98077 582 aa15.23■□□□□ 0.03
USP39-206ENST00000448971 GRSF1Q12849 480 aaKnown RBP eCLIP15.23■□□□□ 0.03
USP39-206ENST00000448971 FILIP1LQ4L180 1135 aa15.23■□□□□ 0.03
USP39-206ENST00000448971 AASDHQ4L235 1098 aaPredicted RBP15.23■□□□□ 0.03
USP39-206ENST00000448971 BSPRYQ5W0U4 402 aa15.23■□□□□ 0.03
USP39-206ENST00000448971 IL31Q6EBC2 164 aa15.23■□□□□ 0.03
USP39-206ENST00000448971 DPY19L2P1Q6NXN4 242 aa15.23■□□□□ 0.03
USP39-206ENST00000448971 BHLHA9Q7RTU4 235 aa15.23■□□□□ 0.03
USP39-206ENST00000448971 FAM71AQ8IYT1 594 aa15.23■□□□□ 0.03
USP39-206ENST00000448971 IRGQQ8WZA9 623 aa15.23■□□□□ 0.03
USP39-206ENST00000448971 ZC3H10Q96K80 434 aaKnown RBP15.23■□□□□ 0.03
USP39-206ENST00000448971 P2RY13Q9BPV8 354 aa15.23■□□□□ 0.03
USP39-206ENST00000448971 NAA15Q9BXJ9 866 aaKnown RBP15.23■□□□□ 0.03
USP39-206ENST00000448971 STK33Q9BYT3 514 aa15.23■□□□□ 0.03
USP39-206ENST00000448971 FBRSL1Q9HCM7 1045 aaKnown RBP15.23■□□□□ 0.03
USP39-206ENST00000448971 ABCC13Q9NSE7 274 aa15.23■□□□□ 0.03
USP39-206ENST00000448971 POLR3BQ9NW08 1133 aaPredicted RBP15.23■□□□□ 0.03
USP39-206ENST00000448971 ANGPTL2Q9UKU9 493 aa15.23■□□□□ 0.03
USP39-206ENST00000448971 PCDHGC3Q9UN70 934 aa15.23■□□□□ 0.03
USP39-206ENST00000448971 SIK3Q9Y2K2 1263 aa15.23■□□□□ 0.03
USP39-206ENST00000448971 DAAM1Q9Y4D1 1078 aa15.23■□□□□ 0.03
USP39-206ENST00000448971 FAM208BQ5VWN6 2430 aa15.23■□□□□ 0.03
USP39-206ENST00000448971 E5RJQ4 531 aa15.22■□□□□ 0.03
USP39-206ENST00000448971 GOLGA6L19H0YKK7 550 aa15.22■□□□□ 0.03
USP39-206ENST00000448971 EPHB6O15197 1021 aa15.22■□□□□ 0.03
USP39-206ENST00000448971 GFPT2O94808 682 aa15.22■□□□□ 0.03
USP39-206ENST00000448971 LTFP02788 710 aa15.22■□□□□ 0.03
USP39-206ENST00000448971 ADH5P11766 374 aa15.22■□□□□ 0.03
USP39-206ENST00000448971 CYP11B1P15538 503 aa15.22■□□□□ 0.03
USP39-206ENST00000448971 COG7P83436 770 aa15.22■□□□□ 0.03
USP39-206ENST00000448971 DHCR24Q15392 516 aa15.22■□□□□ 0.03
USP39-206ENST00000448971 STPG1Q5TH74 334 aa15.22■□□□□ 0.03
USP39-206ENST00000448971 TAF3Q5VWG9 929 aa15.22■□□□□ 0.03
USP39-206ENST00000448971 NAIF1Q69YI7 327 aaPredicted RBP15.22■□□□□ 0.03
USP39-206ENST00000448971 APTXQ7Z2E3 356 aaKnown RBP15.22■□□□□ 0.03
USP39-206ENST00000448971 LUZP1Q86V48 1076 aa15.22■□□□□ 0.03
USP39-206ENST00000448971 ZNF276Q8N554 614 aa15.22■□□□□ 0.03
USP39-206ENST00000448971 STK32AQ8WU08 396 aa15.22■□□□□ 0.03
USP39-206ENST00000448971 CD101Q93033 1021 aa15.22■□□□□ 0.03
USP39-206ENST00000448971 WBP2Q969T9 261 aa15.22■□□□□ 0.03
USP39-206ENST00000448971 SYNCQ9H7C4 482 aa15.22■□□□□ 0.03
USP39-206ENST00000448971 CBX8Q9HC52 389 aa15.22■□□□□ 0.03
USP39-206ENST00000448971 CYTH4Q9UIA0 394 aa15.22■□□□□ 0.03
USP39-206ENST00000448971 GON4LQ3T8J9 2241 aa15.22■□□□□ 0.03
USP39-206ENST00000448971 ATG13O75143 517 aa15.21■□□□□ 0.03
USP39-206ENST00000448971 GABBR2O75899 941 aa15.21■□□□□ 0.03
USP39-206ENST00000448971 STC2O76061 302 aa15.21■□□□□ 0.03
USP39-206ENST00000448971 SERPINC1P01008 464 aa15.21■□□□□ 0.03
USP39-206ENST00000448971 CORO1AP31146 461 aaKnown RBP15.21■□□□□ 0.03
USP39-206ENST00000448971 IQCB1Q15051 598 aa15.21■□□□□ 0.03
USP39-206ENST00000448971 ANO4Q32M45 955 aa15.21■□□□□ 0.03
USP39-206ENST00000448971 LY6G5CQ5SRR4 150 aa15.21■□□□□ 0.03
USP39-206ENST00000448971 FMNL3Q8IVF7 1028 aa15.21■□□□□ 0.03
USP39-206ENST00000448971 CAMKK1Q8N5S9 505 aa15.21■□□□□ 0.03
USP39-206ENST00000448971 C12orf50Q8NA57 414 aaPredicted RBP15.21■□□□□ 0.03
USP39-206ENST00000448971 PLD4Q96BZ4 506 aa15.21■□□□□ 0.03
USP39-206ENST00000448971 ERGIC2Q96RQ1 377 aa15.21■□□□□ 0.03
USP39-206ENST00000448971 TRIM62Q9BVG3 475 aa15.21■□□□□ 0.03
USP39-206ENST00000448971 SLC4A5Q9BY07 1137 aa15.21■□□□□ 0.03
USP39-206ENST00000448971 SFMBT1Q9UHJ3 866 aa15.21■□□□□ 0.03
USP39-206ENST00000448971 PCDHGA5Q9Y5G8 931 aa15.21■□□□□ 0.03
USP39-206ENST00000448971 LRRC10BA6NIK2 292 aa15.2■□□□□ 0.02
USP39-206ENST00000448971 CAPN9O14815 690 aa15.2■□□□□ 0.02
USP39-206ENST00000448971 MSI1O43347 362 aaKnown RBP15.2■□□□□ 0.02
USP39-206ENST00000448971 CAVIN2O95810 425 aa15.2■□□□□ 0.02
USP39-206ENST00000448971 EGFP01133 1207 aa15.2■□□□□ 0.02
USP39-206ENST00000448971 NCAM1P13591 858 aa15.2■□□□□ 0.02
USP39-206ENST00000448971 SOX5P35711 763 aa15.2■□□□□ 0.02
USP39-206ENST00000448971 STAT1P42224 750 aa15.2■□□□□ 0.02
USP39-206ENST00000448971 GALK1P51570 392 aa15.2■□□□□ 0.02
USP39-206ENST00000448971 GAD2Q05329 585 aa15.2■□□□□ 0.02
USP39-206ENST00000448971 PLK5Q496M5 336 aa15.2■□□□□ 0.02
USP39-206ENST00000448971 HTR3DQ70Z44 454 aa15.2■□□□□ 0.02
USP39-206ENST00000448971 NOP9Q86U38 636 aaKnown RBP15.2■□□□□ 0.02
USP39-206ENST00000448971 SCUBE3Q8IX30 993 aa15.2■□□□□ 0.02
USP39-206ENST00000448971 ADGRG2Q8IZP9 1017 aa15.2■□□□□ 0.02
USP39-206ENST00000448971 EPS8L1Q8TE68 723 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms