RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 GPC3P51654 580 aa9.71□□□□□ -0.86
SYNPO2-204ENST00000448416 PKNOX1P55347 436 aa9.71□□□□□ -0.86
SYNPO2-204ENST00000448416 IGBP1P78318 339 aa9.71□□□□□ -0.86
SYNPO2-204ENST00000448416 CTBSQ01459 385 aa9.71□□□□□ -0.86
SYNPO2-204ENST00000448416 KLF10Q13118 480 aa9.71□□□□□ -0.86
SYNPO2-204ENST00000448416 MOGQ16653 247 aa9.71□□□□□ -0.86
SYNPO2-204ENST00000448416 MGAT5BQ3V5L5 792 aa9.71□□□□□ -0.86
SYNPO2-204ENST00000448416 ERFEQ4G0M1 354 aa9.71□□□□□ -0.86
SYNPO2-204ENST00000448416 MROH9Q5TGP6 573 aa9.71□□□□□ -0.86
SYNPO2-204ENST00000448416 PLA2G4FQ68DD2 849 aa9.71□□□□□ -0.86
SYNPO2-204ENST00000448416 SPOPLQ6IQ16 392 aa9.71□□□□□ -0.86
SYNPO2-204ENST00000448416 C16orf89Q6UX73 402 aa9.71□□□□□ -0.86
SYNPO2-204ENST00000448416 PDCD6IPQ8WUM4 868 aaKnown RBP9.71□□□□□ -0.86
SYNPO2-204ENST00000448416 CCDC138Q96M89 665 aa9.71□□□□□ -0.86
SYNPO2-204ENST00000448416 NACC1Q96RE7 527 aa9.71□□□□□ -0.86
SYNPO2-204ENST00000448416 SEMA6AQ9H2E6 1030 aa9.71□□□□□ -0.86
SYNPO2-204ENST00000448416 NCKIPSDQ9NZQ3 722 aa9.71□□□□□ -0.86
SYNPO2-204ENST00000448416 AQP9O43315 295 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 TOP3BO95985 862 aaKnown RBP9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 P4HA1P13674 534 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 CRHR1P34998 444 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 RPS3AP61247 264 aaKnown RBP9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 CEP55Q53EZ4 464 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 C16orf46Q6P387 395 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 SETD3Q86TU7 594 aaPredicted RBP9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 CBWD2Q8IUF1 395 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 SREK1Q8WXA9 508 aaKnown RBP9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 TAMM41Q96BW9 452 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 DHX33Q9H6R0 707 aaKnown RBP9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 CXorf21Q9HAI6 301 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 DNAJC28Q9NX36 388 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 CCPG1Q9ULG6 757 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 AP4S1Q9Y587 144 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 NOX1Q9Y5S8 564 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 TEX264Q9Y6I9 313 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 NAV1Q8NEY1 1877 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 PRSS51A0A1B0GVH4 220 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 PMM2O15305 246 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 KLHL41O60662 606 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 CLASP2O75122 1294 aaKnown RBP9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 C8BP07358 591 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 KCNA4P22459 653 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 GSSP48637 474 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 RPS8P62241 208 aaKnown RBP9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 RPL7AP62424 266 aaKnown RBP9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 PRAMEP78395 509 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 SMUG1Q53HV7 270 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 FGD3Q5JSP0 725 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 GPR107Q5VW38 600 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 TXNRD3NBQ6F5E7 133 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 MAVSQ7Z434 540 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 CARM1Q86X55 608 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 CRYGNQ8WXF5 182 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 DLG3Q92796 817 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 USP13Q92995 863 aaPredicted RBP9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 LENG8Q96PV6 779 aaPredicted RBP9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 TOPORSQ9NS56 1045 aaPredicted RBP9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 CNOT11Q9UKZ1 510 aaKnown RBP9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 PFDN6O15212 129 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 AVILO75366 819 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 RNASEH2AO75792 299 aaKnown RBP9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 CAPN15O75808 1086 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 HOXD11P31277 338 aaPredicted RBP9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 CDKN2BP42772 138 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 MS4A2Q01362 244 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 ZNF677Q86XU0 584 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 UNC45BQ8IWX7 931 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 FIBCD1Q8N539 461 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 UBR7Q8N806 425 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 TMEM102Q8N9M5 508 aaPredicted RBP9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 FAM71DQ8N9W8 422 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 POMGNT1Q8WZA1 660 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 STRA6Q9BX79 667 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 RPF2Q9H7B2 306 aaKnown RBP9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 TMEM8AQ9HCN3 771 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 PALMDQ9NP74 551 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 ERGIC3Q9Y282 383 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 KRBA1A5PL33 1030 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 JAK1P23458 1154 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 RPL10P27635 214 aaKnown RBP9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 SERPINB5P36952 375 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 TRPC3Q13507 836 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 CAMK2BQ13554 666 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 KCNJ8Q15842 424 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 KYQ8NBH2 561 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 ZNF597Q96LX8 424 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 PARVAQ9NVD7 372 aa9.7□□□□□ -0.86
SYNPO2-204ENST00000448416 FAM47E-STBD1D6RA91 191 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 F8VP50 259 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 H3BMQ9 156 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 EIF3FO00303 357 aaPredicted RBP9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 ZBTB14O43829 449 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 CST8O60676 142 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 INHBBP09529 407 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 CD247P20963 164 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 KCNC4Q03721 635 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 IKBKEQ14164 716 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 ABCB5Q2M3G0 1257 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 TBC1D10BQ4KMP7 808 aaPredicted RBP9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 MBLAC2Q68D91 279 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms