RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 PLXND1Q9Y4D7 1925 aa18.49■□□□□ 0.55
DDX56-207ENST00000448192 MSI1O43347 362 aaKnown RBP18.49■□□□□ 0.55
DDX56-207ENST00000448192 ANP32AP39687 249 aaKnown RBP18.49■□□□□ 0.55
DDX56-207ENST00000448192 TRIP4Q15650 581 aaPredicted RBP18.49■□□□□ 0.55
DDX56-207ENST00000448192 PLA2G2CQ5R387 149 aa18.49■□□□□ 0.55
DDX56-207ENST00000448192 PMS2CLQ68D20 193 aa18.49■□□□□ 0.55
DDX56-207ENST00000448192 SCML4Q8N228 414 aa18.49■□□□□ 0.55
DDX56-207ENST00000448192 CPXM2Q8N436 756 aa18.49■□□□□ 0.55
DDX56-207ENST00000448192 CLEC4CQ8WTT0 213 aa18.49■□□□□ 0.55
DDX56-207ENST00000448192 IRGQQ8WZA9 623 aa18.49■□□□□ 0.55
DDX56-207ENST00000448192 GOLGA1Q92805 767 aa18.49■□□□□ 0.55
DDX56-207ENST00000448192 ST7Q9NRC1 585 aa18.49■□□□□ 0.55
DDX56-207ENST00000448192 VPS45Q9NRW7 570 aa18.49■□□□□ 0.55
DDX56-207ENST00000448192 FBXO10Q9UK96 956 aa18.49■□□□□ 0.55
DDX56-207ENST00000448192 LAMA1P25391 3075 aa18.48■□□□□ 0.55
DDX56-207ENST00000448192 MED19A0JLT2 244 aaPredicted RBP18.48■□□□□ 0.55
DDX56-207ENST00000448192 BCLAF3A2AJT9 711 aaKnown RBP18.48■□□□□ 0.55
DDX56-207ENST00000448192 SLC30A4O14863 429 aa18.48■□□□□ 0.55
DDX56-207ENST00000448192 ZBTB24O43167 697 aaPredicted RBP18.48■□□□□ 0.55
DDX56-207ENST00000448192 TSPAN3O60637 253 aa18.48■□□□□ 0.55
DDX56-207ENST00000448192 CAVIN2O95810 425 aa18.48■□□□□ 0.55
DDX56-207ENST00000448192 SLC9A1P19634 815 aa18.48■□□□□ 0.55
DDX56-207ENST00000448192 P2RY2P41231 377 aa18.48■□□□□ 0.55
DDX56-207ENST00000448192 MTIF2P46199 727 aaKnown RBP18.48■□□□□ 0.55
DDX56-207ENST00000448192 DHPSP49366 369 aaPredicted RBP18.48■□□□□ 0.55
DDX56-207ENST00000448192 MFAP3P55082 362 aa18.48■□□□□ 0.55
DDX56-207ENST00000448192 BYSLQ13895 437 aaKnown RBP18.48■□□□□ 0.55
DDX56-207ENST00000448192 ARHGAP44Q17R89 818 aa18.48■□□□□ 0.55
DDX56-207ENST00000448192 GJB7Q6PEY0 223 aa18.48■□□□□ 0.55
DDX56-207ENST00000448192 GBP6Q6ZN66 633 aa18.48■□□□□ 0.55
DDX56-207ENST00000448192 FRMD1Q8N878 549 aa18.48■□□□□ 0.55
DDX56-207ENST00000448192 HSFY1Q96LI6 401 aa18.48■□□□□ 0.55
DDX56-207ENST00000448192 CACNA2D2Q9NY47 1150 aa18.48■□□□□ 0.55
DDX56-207ENST00000448192 CNTN6Q9UQ52 1028 aa18.48■□□□□ 0.55
DDX56-207ENST00000448192 SLC27A6Q9Y2P4 619 aa18.48■□□□□ 0.55
DDX56-207ENST00000448192 A0A1W2PQF6 199 aa18.47■□□□□ 0.55
DDX56-207ENST00000448192 FBXO21O94952 628 aa18.47■□□□□ 0.55
DDX56-207ENST00000448192 LETM1O95202 739 aaPredicted RBP18.47■□□□□ 0.55
DDX56-207ENST00000448192 LTFP02788 710 aa18.47■□□□□ 0.55
DDX56-207ENST00000448192 GABRG2P18507 467 aa18.47■□□□□ 0.55
DDX56-207ENST00000448192 USP8P40818 1118 aa18.47■□□□□ 0.55
DDX56-207ENST00000448192 GEN1Q17RS7 908 aa18.47■□□□□ 0.55
DDX56-207ENST00000448192 TCEAL6Q6IPX3 200 aa18.47■□□□□ 0.55
DDX56-207ENST00000448192 DENND1BQ6P3S1 775 aa18.47■□□□□ 0.55
DDX56-207ENST00000448192 TRIM65Q6PJ69 517 aa18.47■□□□□ 0.55
DDX56-207ENST00000448192 ENOSF1Q7L5Y1 443 aa18.47■□□□□ 0.55
DDX56-207ENST00000448192 IRF2BP1Q8IU81 584 aa18.47■□□□□ 0.55
DDX56-207ENST00000448192 SCUBE3Q8IX30 993 aa18.47■□□□□ 0.55
DDX56-207ENST00000448192 IPO4Q8TEX9 1081 aaKnown RBP18.47■□□□□ 0.55
DDX56-207ENST00000448192 TCEAL3Q969E4 200 aa18.47■□□□□ 0.55
DDX56-207ENST00000448192 RXFP3Q9NSD7 469 aa18.47■□□□□ 0.55
DDX56-207ENST00000448192 CLEC4EQ9ULY5 219 aa18.47■□□□□ 0.55
DDX56-207ENST00000448192 RAD54BQ9Y620 910 aa18.47■□□□□ 0.55
DDX56-207ENST00000448192 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.46■□□□□ 0.55
DDX56-207ENST00000448192 WASH3PC4AMC7 463 aa18.46■□□□□ 0.55
DDX56-207ENST00000448192 THAP12O43422 761 aa18.46■□□□□ 0.55
DDX56-207ENST00000448192 MED7O43513 233 aa18.46■□□□□ 0.55
DDX56-207ENST00000448192 GNA15P30679 374 aa18.46■□□□□ 0.55
DDX56-207ENST00000448192 GPD2P43304 727 aa18.46■□□□□ 0.55
DDX56-207ENST00000448192 APBA1Q02410 837 aa18.46■□□□□ 0.55
DDX56-207ENST00000448192 EXOC3L4Q17RC7 722 aa18.46■□□□□ 0.55
DDX56-207ENST00000448192 MAP7D1Q3KQU3 841 aa18.46■□□□□ 0.55
DDX56-207ENST00000448192 MPPE1Q53F39 396 aa18.46■□□□□ 0.55
DDX56-207ENST00000448192 KIAA1211LQ6NV74 962 aa18.46■□□□□ 0.55
DDX56-207ENST00000448192 MSANTD2Q6P1R3 559 aa18.46■□□□□ 0.55
DDX56-207ENST00000448192 ARMCX6Q7L4S7 300 aa18.46■□□□□ 0.55
DDX56-207ENST00000448192 LPCAT2Q7L5N7 544 aa18.46■□□□□ 0.55
DDX56-207ENST00000448192 CYP2U1Q7Z449 544 aa18.46■□□□□ 0.55
DDX56-207ENST00000448192 FAM217AQ8IXS0 508 aa18.46■□□□□ 0.55
DDX56-207ENST00000448192 TMEFF1Q8IYR6 380 aa18.46■□□□□ 0.55
DDX56-207ENST00000448192 ZNF606Q8WXB4 792 aa18.46■□□□□ 0.55
DDX56-207ENST00000448192 FAM81BQ96LP2 452 aa18.46■□□□□ 0.55
DDX56-207ENST00000448192 GABRG3Q99928 467 aa18.46■□□□□ 0.55
DDX56-207ENST00000448192 NUP62CLQ9H1M0 184 aa18.46■□□□□ 0.55
DDX56-207ENST00000448192 ACP6Q9NPH0 428 aa18.46■□□□□ 0.55
DDX56-207ENST00000448192 CALCOCO1Q9P1Z2 691 aa18.46■□□□□ 0.55
DDX56-207ENST00000448192 APEX2Q9UBZ4 518 aa18.46■□□□□ 0.55
DDX56-207ENST00000448192 MBD1Q9UIS9 605 aaPredicted RBP18.46■□□□□ 0.55
DDX56-207ENST00000448192 TNRC6BQ9UPQ9 1833 aaKnown RBP18.46■□□□□ 0.55
DDX56-207ENST00000448192 GFRA2O00451 464 aa18.45■□□□□ 0.54
DDX56-207ENST00000448192 NCAM1P13591 858 aa18.45■□□□□ 0.54
DDX56-207ENST00000448192 DPCR1Q3MIW9 517 aa18.45■□□□□ 0.54
DDX56-207ENST00000448192 ADGRF1Q5T601 910 aa18.45■□□□□ 0.54
DDX56-207ENST00000448192 IL31Q6EBC2 164 aa18.45■□□□□ 0.54
DDX56-207ENST00000448192 ANKS1BQ7Z6G8 1248 aa18.45■□□□□ 0.54
DDX56-207ENST00000448192 UCMAQ8WVF2 138 aa18.45■□□□□ 0.54
DDX56-207ENST00000448192 PIGKQ92643 395 aa18.45■□□□□ 0.54
DDX56-207ENST00000448192 FAM149B1Q96BN6 582 aa18.45■□□□□ 0.54
DDX56-207ENST00000448192 TMA16Q96EY4 203 aaKnown RBP18.45■□□□□ 0.54
DDX56-207ENST00000448192 PIWIL1Q96J94 861 aaKnown RBP18.45■□□□□ 0.54
DDX56-207ENST00000448192 SLC2A11Q9BYW1 496 aa18.45■□□□□ 0.54
DDX56-207ENST00000448192 STON1Q9Y6Q2 735 aa18.45■□□□□ 0.54
DDX56-207ENST00000448192 NDUFV2P19404 249 aa18.44■□□□□ 0.54
DDX56-207ENST00000448192 PON1P27169 355 aa18.44■□□□□ 0.54
DDX56-207ENST00000448192 ACADSBP45954 432 aa18.44■□□□□ 0.54
DDX56-207ENST00000448192 TBX4P57082 545 aa18.44■□□□□ 0.54
DDX56-207ENST00000448192 HSP90AA4PQ58FG1 418 aa18.44■□□□□ 0.54
DDX56-207ENST00000448192 STPG1Q5TH74 334 aa18.44■□□□□ 0.54
DDX56-207ENST00000448192 FAM114A1Q8IWE2 563 aa18.44■□□□□ 0.54
DDX56-207ENST00000448192 UNC45BQ8IWX7 931 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms