RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 LCLAT1Q6UWP7 414 aa13.34□□□□□ -0.27
SHC1-210ENST00000448116 RSPH3Q86UC2 560 aa13.34□□□□□ -0.27
SHC1-210ENST00000448116 EXOC8Q8IYI6 725 aa13.34□□□□□ -0.27
SHC1-210ENST00000448116 GSDMBQ8TAX9 411 aa13.34□□□□□ -0.27
SHC1-210ENST00000448116 EBNA1BP2Q99848 306 aaKnown RBP13.34□□□□□ -0.27
SHC1-210ENST00000448116 IFT122Q9HBG6 1241 aa13.34□□□□□ -0.27
SHC1-210ENST00000448116 MAGED2Q9UNF1 606 aaPredicted RBP13.34□□□□□ -0.27
SHC1-210ENST00000448116 PFKMP08237 780 aa13.33□□□□□ -0.27
SHC1-210ENST00000448116 ADORA2BP29275 332 aa13.33□□□□□ -0.27
SHC1-210ENST00000448116 GMPRP36959 345 aa13.33□□□□□ -0.27
SHC1-210ENST00000448116 SLC10A2Q12908 348 aaPredicted RBP13.33□□□□□ -0.27
SHC1-210ENST00000448116 FASTKD1Q53R41 847 aaKnown RBP13.33□□□□□ -0.27
SHC1-210ENST00000448116 CES3Q6UWW8 571 aa13.33□□□□□ -0.27
SHC1-210ENST00000448116 CDKL3Q8IVW4 592 aaPredicted RBP13.33□□□□□ -0.27
SHC1-210ENST00000448116 SH3TC2Q8TF17 1288 aa13.33□□□□□ -0.27
SHC1-210ENST00000448116 SIGLEC10Q96LC7 697 aa13.33□□□□□ -0.27
SHC1-210ENST00000448116 MRPL45Q9BRJ2 306 aaKnown RBP13.33□□□□□ -0.27
SHC1-210ENST00000448116 PDZD7Q9H5P4 517 aa13.33□□□□□ -0.27
SHC1-210ENST00000448116 GBA2Q9HCG7 927 aaPredicted RBP13.33□□□□□ -0.27
SHC1-210ENST00000448116 PNPLA8Q9NP80 782 aa13.33□□□□□ -0.27
SHC1-210ENST00000448116 DNAJC16Q9Y2G8 782 aa13.33□□□□□ -0.27
SHC1-210ENST00000448116 C1QAP02745 245 aa13.33□□□□□ -0.28
SHC1-210ENST00000448116 BPGMP07738 259 aa13.33□□□□□ -0.28
SHC1-210ENST00000448116 UBTFL6P0CB48 400 aaPredicted RBP13.33□□□□□ -0.28
SHC1-210ENST00000448116 PRKCHP24723 683 aa13.33□□□□□ -0.28
SHC1-210ENST00000448116 ATICP31939 592 aa13.33□□□□□ -0.28
SHC1-210ENST00000448116 PDE1BQ01064 536 aa13.33□□□□□ -0.28
SHC1-210ENST00000448116 TNFAIP2Q03169 654 aa13.33□□□□□ -0.28
SHC1-210ENST00000448116 KCTD2Q14681 263 aa13.33□□□□□ -0.28
SHC1-210ENST00000448116 LRRC36Q1X8D7 754 aa13.33□□□□□ -0.28
SHC1-210ENST00000448116 GLRA4Q5JXX5 417 aa13.33□□□□□ -0.28
SHC1-210ENST00000448116 HEATR6Q6AI08 1181 aaKnown RBP13.33□□□□□ -0.28
SHC1-210ENST00000448116 RIPOR1Q6ZS17 1223 aa13.33□□□□□ -0.28
SHC1-210ENST00000448116 PLPPR4Q7Z2D5 763 aa13.33□□□□□ -0.28
SHC1-210ENST00000448116 TTC30AQ86WT1 665 aa13.33□□□□□ -0.28
SHC1-210ENST00000448116 HIPK4Q8NE63 616 aa13.33□□□□□ -0.28
SHC1-210ENST00000448116 FAM210AQ96ND0 272 aa13.33□□□□□ -0.28
SHC1-210ENST00000448116 ARHGEF4Q9NR80 690 aa13.33□□□□□ -0.28
SHC1-210ENST00000448116 TAGLN3Q9UI15 199 aa13.33□□□□□ -0.28
SHC1-210ENST00000448116 PPEF2O14830 753 aa13.33□□□□□ -0.28
SHC1-210ENST00000448116 USP2O75604 605 aaPredicted RBP13.33□□□□□ -0.28
SHC1-210ENST00000448116 ADORA2AP29274 412 aa13.33□□□□□ -0.28
SHC1-210ENST00000448116 EPHB1P54762 984 aa13.33□□□□□ -0.28
SHC1-210ENST00000448116 HDAC4P56524 1084 aa13.33□□□□□ -0.28
SHC1-210ENST00000448116 SLC6A3Q01959 620 aa13.33□□□□□ -0.28
SHC1-210ENST00000448116 OCRLQ01968 901 aa13.33□□□□□ -0.28
SHC1-210ENST00000448116 MTBPQ96DY7 904 aa13.33□□□□□ -0.28
SHC1-210ENST00000448116 ATXN7L3BQ96GX2 97 aa13.33□□□□□ -0.28
SHC1-210ENST00000448116 C7orf26Q96N11 449 aa13.33□□□□□ -0.28
SHC1-210ENST00000448116 MPHOSPH6Q99547 160 aaKnown RBP13.33□□□□□ -0.28
SHC1-210ENST00000448116 DDX50Q9BQ39 737 aaKnown RBP13.33□□□□□ -0.28
SHC1-210ENST00000448116 CXCL16Q9H2A7 254 aa13.33□□□□□ -0.28
SHC1-210ENST00000448116 VCXQ9H320 206 aa13.33□□□□□ -0.28
SHC1-210ENST00000448116 STX18Q9P2W9 335 aaKnown RBP13.33□□□□□ -0.28
SHC1-210ENST00000448116 ZNF180Q9UJW8 692 aa13.33□□□□□ -0.28
SHC1-210ENST00000448116 LRCH1Q9Y2L9 728 aa13.33□□□□□ -0.28
SHC1-210ENST00000448116 HBS1LQ9Y450 684 aaKnown RBP13.33□□□□□ -0.28
SHC1-210ENST00000448116 MYO18AQ92614 2054 aaKnown RBP13.32□□□□□ -0.28
SHC1-210ENST00000448116 RGPD3A6NKT7 1758 aaPredicted RBP13.32□□□□□ -0.28
SHC1-210ENST00000448116 RGPD4Q7Z3J3 1758 aa13.32□□□□□ -0.28
SHC1-210ENST00000448116 BCLAF3A2AJT9 711 aaKnown RBP13.32□□□□□ -0.28
SHC1-210ENST00000448116 HMX2A2RU54 273 aa13.32□□□□□ -0.28
SHC1-210ENST00000448116 KIF3CO14782 793 aa13.32□□□□□ -0.28
SHC1-210ENST00000448116 KLF11O14901 512 aa13.32□□□□□ -0.28
SHC1-210ENST00000448116 PAPSS1O43252 624 aaPredicted RBP13.32□□□□□ -0.28
SHC1-210ENST00000448116 ITM2AO43736 263 aa13.32□□□□□ -0.28
SHC1-210ENST00000448116 USP1O94782 785 aa13.32□□□□□ -0.28
SHC1-210ENST00000448116 C6orf222P0C671 652 aaPredicted RBP13.32□□□□□ -0.28
SHC1-210ENST00000448116 THEMIS2Q5TEJ8 643 aa13.32□□□□□ -0.28
SHC1-210ENST00000448116 PYROXD2Q8N2H3 581 aa13.32□□□□□ -0.28
SHC1-210ENST00000448116 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.32□□□□□ -0.284e-6■■■■■ 36.6
SHC1-210ENST00000448116 PPP1R13LQ8WUF5 828 aa13.32□□□□□ -0.28
SHC1-210ENST00000448116 FRMD8Q9BZ67 464 aaPredicted RBP13.32□□□□□ -0.28
SHC1-210ENST00000448116 ELP3Q9H9T3 547 aa13.32□□□□□ -0.28
SHC1-210ENST00000448116 XAB2Q9HCS7 855 aaKnown RBP13.32□□□□□ -0.28
SHC1-210ENST00000448116 SCOCQ9UIL1 159 aa13.32□□□□□ -0.28
SHC1-210ENST00000448116 CSADQ9Y600 493 aa13.32□□□□□ -0.28
SHC1-210ENST00000448116 F7P08709 466 aaPredicted RBP13.32□□□□□ -0.28
SHC1-210ENST00000448116 MCF2P10911 925 aa13.32□□□□□ -0.28
SHC1-210ENST00000448116 SLC25A3Q00325 362 aa13.32□□□□□ -0.28
SHC1-210ENST00000448116 TMEM62Q0P6H9 643 aa13.32□□□□□ -0.28
SHC1-210ENST00000448116 N4BP2L1Q5TBK1 243 aaPredicted RBP13.32□□□□□ -0.28
SHC1-210ENST00000448116 RNF220Q5VTB9 566 aa13.32□□□□□ -0.28
SHC1-210ENST00000448116 OLFML1Q6UWY5 402 aa13.32□□□□□ -0.28
SHC1-210ENST00000448116 WDR75Q8IWA0 830 aaKnown RBP13.32□□□□□ -0.28
SHC1-210ENST00000448116 ADGRF2Q8IZF7 708 aa13.32□□□□□ -0.28
SHC1-210ENST00000448116 CCNYQ8ND76 341 aa13.32□□□□□ -0.28
SHC1-210ENST00000448116 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.32□□□□□ -0.28
SHC1-210ENST00000448116 SHKBP1Q8TBC3 707 aa13.32□□□□□ -0.28
SHC1-210ENST00000448116 LGMNQ99538 433 aa13.32□□□□□ -0.28
SHC1-210ENST00000448116 ASB7Q9H672 318 aa13.32□□□□□ -0.28
SHC1-210ENST00000448116 CYP4F11Q9HBI6 524 aa13.32□□□□□ -0.28
SHC1-210ENST00000448116 SIRPGQ9P1W8 387 aa13.32□□□□□ -0.28
SHC1-210ENST00000448116 LGR5O75473 907 aa13.32□□□□□ -0.28
SHC1-210ENST00000448116 USP4Q13107 963 aa13.32□□□□□ -0.28
SHC1-210ENST00000448116 Q3C1V9 767 aa13.32□□□□□ -0.28
SHC1-210ENST00000448116 FAM131BQ86XD5 332 aa13.32□□□□□ -0.28
SHC1-210ENST00000448116 ULK2Q8IYT8 1036 aa13.32□□□□□ -0.28
SHC1-210ENST00000448116 SPDYE1Q8NFV5 336 aaPredicted RBP13.32□□□□□ -0.28
SHC1-210ENST00000448116 FAM149B1Q96BN6 582 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms