RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 MAPTP10636 758 aaKnown RBP13.55□□□□□ -0.24
DDX56-206ENST00000446987 DNAJC3Q13217 504 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 RASA2Q15283 850 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 ODR4Q5SWX8 454 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 EEF1DP3Q658K8 133 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 SLC24A5Q71RS6 500 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 CDR2LQ86X02 465 aaPredicted RBP13.55□□□□□ -0.24
DDX56-206ENST00000446987 LRRC6Q86X45 466 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 TMPRSS6Q8IU80 811 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 ERI1Q8IV48 349 aaKnown RBP13.55□□□□□ -0.24
DDX56-206ENST00000446987 PPP1R14CQ8TAE6 165 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 CCDC110Q8TBZ0 833 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 SP7Q8TDD2 431 aaPredicted RBP13.55□□□□□ -0.24
DDX56-206ENST00000446987 TRPC4APQ8TEL6 797 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 ZNF689Q96CS4 500 aaPredicted RBP13.55□□□□□ -0.24
DDX56-206ENST00000446987 CCT7Q99832 543 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 STRA6Q9BX79 667 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 C2orf40Q9H1Z8 148 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 EBF3Q9H4W6 596 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 PARVGQ9HBI0 331 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 KMT5AQ9NQR1 393 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 CHST12Q9NRB3 414 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 C1orf112Q9NSG2 853 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 TAS2R1Q9NYW7 299 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 ANKFY1Q9P2R3 1169 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 ZNF711Q9Y462 761 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 EYSQ5T1H1 3165 aa13.54□□□□□ -0.24
DDX56-206ENST00000446987 A0A0U1RQF3 1178 aa13.54□□□□□ -0.24
DDX56-206ENST00000446987 TRMUO75648 421 aaKnown RBP13.54□□□□□ -0.24
DDX56-206ENST00000446987 TGDSO95455 350 aa13.54□□□□□ -0.24
DDX56-206ENST00000446987 VCLP18206 1134 aa13.54□□□□□ -0.24
DDX56-206ENST00000446987 CASP5P51878 434 aa13.54□□□□□ -0.24
DDX56-206ENST00000446987 PCBP1Q15365 356 aaKnown RBP eCLIP13.54□□□□□ -0.24
DDX56-206ENST00000446987 NANOGNBQ7Z5D8 188 aa13.54□□□□□ -0.24
DDX56-206ENST00000446987 MTDHQ86UE4 582 aaKnown RBP13.54□□□□□ -0.24
DDX56-206ENST00000446987 RASSF3Q86WH2 238 aa13.54□□□□□ -0.24
DDX56-206ENST00000446987 NPAS4Q8IUM7 802 aa13.54□□□□□ -0.24
DDX56-206ENST00000446987 ZBTB8OSQ8IWT0 167 aa13.54□□□□□ -0.24
DDX56-206ENST00000446987 MARVELD2Q8N4S9 558 aa13.54□□□□□ -0.24
DDX56-206ENST00000446987 PRELID2Q8N945 189 aa13.54□□□□□ -0.24
DDX56-206ENST00000446987 FAM172AQ8WUF8 416 aa13.54□□□□□ -0.24
DDX56-206ENST00000446987 MAML1Q92585 1016 aa13.54□□□□□ -0.24
DDX56-206ENST00000446987 EEF2KMTQ96G04 330 aa13.54□□□□□ -0.24
DDX56-206ENST00000446987 ZMAT2Q96NC0 199 aaKnown RBP13.54□□□□□ -0.24
DDX56-206ENST00000446987 TTYH1Q9H313 450 aaPredicted RBP13.54□□□□□ -0.24
DDX56-206ENST00000446987 GOLPH3Q9H4A6 298 aa13.54□□□□□ -0.24
DDX56-206ENST00000446987 PDZD7Q9H5P4 517 aa13.54□□□□□ -0.24
DDX56-206ENST00000446987 PRMT7Q9NVM4 692 aaPredicted RBP13.54□□□□□ -0.24
DDX56-206ENST00000446987 MTO1Q9Y2Z2 717 aaKnown RBP13.54□□□□□ -0.24
DDX56-206ENST00000446987 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.54□□□□□ -0.24
DDX56-206ENST00000446987 PCDHA11Q9Y5I1 949 aa13.54□□□□□ -0.24
DDX56-206ENST00000446987 REV3LO60673 3130 aa13.54□□□□□ -0.24
DDX56-206ENST00000446987 BOLA2-SMG1P6H3BVE0 249 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 ACKR2O00590 384 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 DENRO43583 198 aaKnown RBP13.53□□□□□ -0.24
DDX56-206ENST00000446987 DGKIO75912 1065 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 FAM13AO94988 1023 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 CLPTM1O96005 669 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 IL1BP01584 269 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 TFAP2AP05549 437 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 ATP5BP06576 529 aaKnown RBP13.53□□□□□ -0.24
DDX56-206ENST00000446987 ZNF12P17014 697 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 NMT1P30419 496 aaKnown RBP13.53□□□□□ -0.24
DDX56-206ENST00000446987 PGM1P36871 562 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 CCT8P50990 548 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 PFKPQ01813 784 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 PPIDQ08752 370 aaKnown RBP13.53□□□□□ -0.24
DDX56-206ENST00000446987 PDK3Q15120 406 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 ZNF423Q2M1K9 1284 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 DNAL1Q4LDG9 190 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 CLLU1OSQ5K130 101 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 UBAP2Q5T6F2 1119 aaKnown RBP13.53□□□□□ -0.24
DDX56-206ENST00000446987 DEPDC1Q5TB30 811 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 ARL10Q8N8L6 244 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 SMG8Q8ND04 991 aaKnown RBP13.53□□□□□ -0.24
DDX56-206ENST00000446987 GLIS3Q8NEA6 775 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 UHMK1Q8TAS1 419 aaKnown RBP13.53□□□□□ -0.24
DDX56-206ENST00000446987 CASP10Q92851 521 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 DNAJC1Q96KC8 554 aaKnown RBP13.53□□□□□ -0.24
DDX56-206ENST00000446987 COX4I2Q96KJ9 171 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 STK33Q9BYT3 514 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 FOXP3Q9BZS1 431 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 NKX2-4Q9H2Z4 354 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 TMEM134Q9H6X4 195 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 ZNF696Q9H7X3 374 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 MLXIPLQ9NP71 852 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 AAASQ9NRG9 546 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 FAM105AQ9NUU6 356 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 ARL8BQ9NVJ2 186 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 UVRAGQ9P2Y5 699 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 HCSTQ9UBK5 93 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 NAALADL1Q9UQQ1 740 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 TTLL3Q9Y4R7 772 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 TRIP11Q15643 1979 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 GOLGA8TH3BQL2 631 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 TBCAO75347 108 aaKnown RBP13.53□□□□□ -0.24
DDX56-206ENST00000446987 SPAG7O75391 227 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 TM7SF2O76062 418 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 OR6B1O95007 311 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 CA3P07451 260 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms