RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 SMG9Q9H0W8 520 aaKnown RBP17.96■□□□□ 0.47
LIME1-202ENST00000444951 SMPD4Q9NXE4 827 aa17.96■□□□□ 0.47
LIME1-202ENST00000444951 CLIC5Q9NZA1 410 aa17.96■□□□□ 0.47
LIME1-202ENST00000444951 SFMBT1Q9UHJ3 866 aa17.96■□□□□ 0.47
LIME1-202ENST00000444951 INTUQ9ULD6 942 aa17.96■□□□□ 0.47
LIME1-202ENST00000444951 PYCARDQ9ULZ3 195 aa17.96■□□□□ 0.47
LIME1-202ENST00000444951 SIT1Q9Y3P8 196 aa17.96■□□□□ 0.47
LIME1-202ENST00000444951 MTF2Q9Y483 593 aaPredicted RBP17.96■□□□□ 0.47
LIME1-202ENST00000444951 R4GN57 208 aa17.96■□□□□ 0.47
LIME1-202ENST00000444951 DMXL1Q9Y485 3027 aa17.96■□□□□ 0.47
LIME1-202ENST00000444951 OBSL1O75147 1896 aa17.96■□□□□ 0.47
LIME1-202ENST00000444951 FANCMQ8IYD8 2048 aa17.96■□□□□ 0.47
LIME1-202ENST00000444951 ZNF292O60281 2723 aa17.95■□□□□ 0.46
LIME1-202ENST00000444951 TRAV19A0A0A6YYK7 116 aa17.95■□□□□ 0.46
LIME1-202ENST00000444951 TMEM110-MUSTN1A8MSY1 372 aa17.95■□□□□ 0.46
LIME1-202ENST00000444951 CKMP06732 381 aa17.95■□□□□ 0.46
LIME1-202ENST00000444951 MBL2P11226 248 aaPredicted RBP17.95■□□□□ 0.46
LIME1-202ENST00000444951 HDCP19113 662 aa17.95■□□□□ 0.46
LIME1-202ENST00000444951 GPD1P21695 349 aa17.95■□□□□ 0.46
LIME1-202ENST00000444951 ATP5C1P36542 298 aaKnown RBP17.95■□□□□ 0.46
LIME1-202ENST00000444951 SULT1E1P49888 294 aa17.95■□□□□ 0.46
LIME1-202ENST00000444951 NAP1L1P55209 391 aaKnown RBP17.95■□□□□ 0.46
LIME1-202ENST00000444951 PITX1P78337 314 aaPredicted RBP17.95■□□□□ 0.46
LIME1-202ENST00000444951 ATP11AP98196 1134 aa17.95■□□□□ 0.46
LIME1-202ENST00000444951 CDO1Q16878 200 aa17.95■□□□□ 0.46
LIME1-202ENST00000444951 PPP1R15BQ5SWA1 713 aa17.95■□□□□ 0.46
LIME1-202ENST00000444951 SNX30Q5VWJ9 437 aa17.95■□□□□ 0.46
LIME1-202ENST00000444951 TRNP1Q6NT89 227 aa17.95■□□□□ 0.46
LIME1-202ENST00000444951 MTSS1LQ765P7 747 aa17.95■□□□□ 0.46
LIME1-202ENST00000444951 SLC35G2Q8TBE7 412 aa17.95■□□□□ 0.46
LIME1-202ENST00000444951 ZNF564Q8TBZ8 553 aaPredicted RBP17.95■□□□□ 0.46
LIME1-202ENST00000444951 CFAP57Q96MR6 1250 aa17.95■□□□□ 0.46
LIME1-202ENST00000444951 RNF38Q9H0F5 515 aa17.95■□□□□ 0.46
LIME1-202ENST00000444951 TASP1Q9H6P5 420 aa17.95■□□□□ 0.46
LIME1-202ENST00000444951 FAM204AQ9H8W3 233 aa17.95■□□□□ 0.46
LIME1-202ENST00000444951 OSGEPQ9NPF4 335 aa17.95■□□□□ 0.46
LIME1-202ENST00000444951 TRIM10Q9UDY6 481 aa17.95■□□□□ 0.46
LIME1-202ENST00000444951 ANAPC7Q9UJX3 599 aa17.95■□□□□ 0.46
LIME1-202ENST00000444951 DUSP10Q9Y6W6 482 aa17.95■□□□□ 0.46
LIME1-202ENST00000444951 TMEM191CA6NGB0 347 aa17.94■□□□□ 0.46
LIME1-202ENST00000444951 MSI1O43347 362 aaKnown RBP17.94■□□□□ 0.46
LIME1-202ENST00000444951 OAS1P00973 400 aaKnown RBP17.94■□□□□ 0.46
LIME1-202ENST00000444951 HMBSP08397 361 aa17.94■□□□□ 0.46
LIME1-202ENST00000444951 TFE3P19532 575 aaPredicted RBP17.94■□□□□ 0.46
LIME1-202ENST00000444951 CD72P21854 359 aa17.94■□□□□ 0.46
LIME1-202ENST00000444951 NOS2P35228 1153 aa17.94■□□□□ 0.46
LIME1-202ENST00000444951 MATKP42679 507 aa17.94■□□□□ 0.46
LIME1-202ENST00000444951 KIF5AQ12840 1032 aa17.94■□□□□ 0.46
LIME1-202ENST00000444951 C15orf59Q2T9L4 293 aaPredicted RBP17.94■□□□□ 0.46
LIME1-202ENST00000444951 TADA2BQ86TJ2 420 aa17.94■□□□□ 0.46
LIME1-202ENST00000444951 MAML2Q8IZL2 1156 aaPredicted RBP17.94■□□□□ 0.46
LIME1-202ENST00000444951 TXLNBQ8N3L3 684 aa17.94■□□□□ 0.46
LIME1-202ENST00000444951 DQX1Q8TE96 717 aaKnown RBP17.94■□□□□ 0.46
LIME1-202ENST00000444951 RFFLQ8WZ73 363 aa17.94■□□□□ 0.46
LIME1-202ENST00000444951 TRIM44Q96DX7 344 aaPredicted RBP17.94■□□□□ 0.46
LIME1-202ENST00000444951 CDK5RAP1Q96SZ6 601 aaKnown RBP17.94■□□□□ 0.46
LIME1-202ENST00000444951 TBCBQ99426 244 aa17.94■□□□□ 0.46
LIME1-202ENST00000444951 DDX23Q9BUQ8 820 aaKnown RBP17.94■□□□□ 0.46
LIME1-202ENST00000444951 OLA1Q9NTK5 396 aaKnown RBP17.94■□□□□ 0.46
LIME1-202ENST00000444951 MARCH2Q9P0N8 246 aa17.94■□□□□ 0.46
LIME1-202ENST00000444951 DNMT3LQ9UJW3 386 aa17.94■□□□□ 0.46
LIME1-202ENST00000444951 PPP2R2CQ9Y2T4 447 aa17.94■□□□□ 0.46
LIME1-202ENST00000444951 SLC12A8A0AV02 714 aa17.93■□□□□ 0.46
LIME1-202ENST00000444951 C2CD4BA6NLJ0 364 aa17.93■□□□□ 0.46
LIME1-202ENST00000444951 M0QYT0 321 aa17.93■□□□□ 0.46
LIME1-202ENST00000444951 BUB1O43683 1085 aa17.93■□□□□ 0.46
LIME1-202ENST00000444951 IRF1P10914 325 aa17.93■□□□□ 0.46
LIME1-202ENST00000444951 FCARP24071 287 aa17.93■□□□□ 0.46
LIME1-202ENST00000444951 PSMA2P25787 234 aa17.93■□□□□ 0.46
LIME1-202ENST00000444951 DDX6P26196 483 aaKnown RBP eCLIP17.93■□□□□ 0.46
LIME1-202ENST00000444951 SDC4P31431 198 aa17.93■□□□□ 0.46
LIME1-202ENST00000444951 AVPR1AP37288 418 aa17.93■□□□□ 0.46
LIME1-202ENST00000444951 TUBP50607 506 aa17.93■□□□□ 0.46
LIME1-202ENST00000444951 OGDHQ02218 1023 aa17.93■□□□□ 0.46
LIME1-202ENST00000444951 NME3Q13232 169 aa17.93■□□□□ 0.46
LIME1-202ENST00000444951 MLF2Q15773 248 aaPredicted RBP17.93■□□□□ 0.46
LIME1-202ENST00000444951 CCDC14Q49A88 953 aa17.93■□□□□ 0.46
LIME1-202ENST00000444951 SLC44A4Q53GD3 710 aa17.93■□□□□ 0.46
LIME1-202ENST00000444951 SH3PXD2AQ5TCZ1 1133 aa17.93■□□□□ 0.46
LIME1-202ENST00000444951 TANGO2Q6ICL3 276 aa17.93■□□□□ 0.46
LIME1-202ENST00000444951 TAC4Q86UU9 113 aa17.93■□□□□ 0.46
LIME1-202ENST00000444951 RHOT2Q8IXI1 618 aa17.93■□□□□ 0.46
LIME1-202ENST00000444951 CMTM8Q8IZV2 173 aa17.93■□□□□ 0.46
LIME1-202ENST00000444951 ZSCAN18Q8TBC5 510 aaPredicted RBP17.93■□□□□ 0.46
LIME1-202ENST00000444951 LZTFL1Q9NQ48 299 aa17.93■□□□□ 0.46
LIME1-202ENST00000444951 GKN1Q9NS71 199 aa17.93■□□□□ 0.46
LIME1-202ENST00000444951 DDIT4Q9NX09 232 aa17.93■□□□□ 0.46
LIME1-202ENST00000444951 UVRAGQ9P2Y5 699 aa17.93■□□□□ 0.46
LIME1-202ENST00000444951 STAP1Q9ULZ2 295 aa17.93■□□□□ 0.46
LIME1-202ENST00000444951 ANAPC1Q9H1A4 1944 aa17.93■□□□□ 0.46
LIME1-202ENST00000444951 GPR179Q6PRD1 2367 aa17.93■□□□□ 0.46
LIME1-202ENST00000444951 OTOGLQ3ZCN5 2332 aa17.92■□□□□ 0.46
LIME1-202ENST00000444951 MACROD2A1Z1Q3 448 aa17.92■□□□□ 0.46
LIME1-202ENST00000444951 SHISA7A6NL88 538 aa17.92■□□□□ 0.46
LIME1-202ENST00000444951 TRUB2O95900 331 aaKnown RBP17.92■□□□□ 0.46
LIME1-202ENST00000444951 SP9P0CG40 484 aa17.92■□□□□ 0.46
LIME1-202ENST00000444951 RAB6CQ53S08 254 aa17.92■□□□□ 0.46
LIME1-202ENST00000444951 C1orf210Q8IVY1 113 aa17.92■□□□□ 0.46
LIME1-202ENST00000444951 RNF34Q969K3 372 aa17.92■□□□□ 0.46
LIME1-202ENST00000444951 RAB6CQ9H0N0 254 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms