RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 SLC24A2Q9UI40 661 aa16.24■□□□□ 0.19
SNX13-204ENST00000444712 ZNF638Q14966 1978 aaKnown RBP16.23■□□□□ 0.19
SNX13-204ENST00000444712 SYNJ2BP-COX16A0A087WUM0 186 aa16.23■□□□□ 0.19
SNX13-204ENST00000444712 C5orf60A6NFR6 353 aa16.23■□□□□ 0.19
SNX13-204ENST00000444712 PPP1R12AO14974 1030 aaPredicted RBP16.23■□□□□ 0.19
SNX13-204ENST00000444712 DDHD2O94830 711 aa16.23■□□□□ 0.19
SNX13-204ENST00000444712 OAZ2O95190 189 aa16.23■□□□□ 0.19
SNX13-204ENST00000444712 AMPD1P23109 780 aa16.23■□□□□ 0.19
SNX13-204ENST00000444712 IFI35P80217 286 aaPredicted RBP16.23■□□□□ 0.19
SNX13-204ENST00000444712 GBE1Q04446 702 aa16.23■□□□□ 0.19
SNX13-204ENST00000444712 NFE2Q16621 373 aaPredicted RBP16.23■□□□□ 0.19
SNX13-204ENST00000444712 TTC19Q6DKK2 380 aaPredicted RBP16.23■□□□□ 0.19
SNX13-204ENST00000444712 VPS52Q8N1B4 723 aa16.23■□□□□ 0.19
SNX13-204ENST00000444712 SEPT8Q92599 483 aa16.23■□□□□ 0.19
SNX13-204ENST00000444712 FUBP3Q96I24 572 aaKnown RBP eCLIP16.23■□□□□ 0.19
SNX13-204ENST00000444712 OLFM3Q96PB7 478 aa16.23■□□□□ 0.19
SNX13-204ENST00000444712 RAB6BQ9NRW1 208 aa16.23■□□□□ 0.19
SNX13-204ENST00000444712 TMEM30AQ9NV96 361 aa16.23■□□□□ 0.19
SNX13-204ENST00000444712 ETNK2Q9NVF9 386 aa16.23■□□□□ 0.19
SNX13-204ENST00000444712 DDIT4Q9NX09 232 aa16.23■□□□□ 0.19
SNX13-204ENST00000444712 DTLQ9NZJ0 730 aa16.23■□□□□ 0.19
SNX13-204ENST00000444712 COX16Q9P0S2 106 aa16.23■□□□□ 0.19
SNX13-204ENST00000444712 FBXW11Q9UKB1 542 aa16.23■□□□□ 0.19
SNX13-204ENST00000444712 PCDHB7Q9Y5E2 793 aa16.23■□□□□ 0.19
SNX13-204ENST00000444712 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.23■□□□□ 0.19
SNX13-204ENST00000444712 GOLGA8MH3BSY2 632 aa16.23■□□□□ 0.19
SNX13-204ENST00000444712 TMEM63AO94886 807 aa16.23■□□□□ 0.19
SNX13-204ENST00000444712 ITGB1P05556 798 aa16.23■□□□□ 0.19
SNX13-204ENST00000444712 CYP2C18P33260 490 aa16.23■□□□□ 0.19
SNX13-204ENST00000444712 OR1G1P47890 313 aa16.23■□□□□ 0.19
SNX13-204ENST00000444712 PAFAH1B3Q15102 231 aaKnown RBP16.23■□□□□ 0.19
SNX13-204ENST00000444712 PDK1Q15118 436 aa16.23■□□□□ 0.19
SNX13-204ENST00000444712 KLHL38Q2WGJ6 581 aa16.23■□□□□ 0.19
SNX13-204ENST00000444712 CCDC38Q502W7 563 aa16.23■□□□□ 0.19
SNX13-204ENST00000444712 PLEKHG4Q58EX7 1191 aa16.23■□□□□ 0.19
SNX13-204ENST00000444712 KCNT2Q6UVM3 1135 aa16.23■□□□□ 0.19
SNX13-204ENST00000444712 WDR6Q9NNW5 1121 aaKnown RBP16.23■□□□□ 0.19
SNX13-204ENST00000444712 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.23■□□□□ 0.19
SNX13-204ENST00000444712 SENP1Q9P0U3 644 aa16.23■□□□□ 0.19
SNX13-204ENST00000444712 ZMYND8Q9ULU4 1186 aaPredicted RBP16.23■□□□□ 0.19
SNX13-204ENST00000444712 TRIM17Q9Y577 477 aa16.23■□□□□ 0.19
SNX13-204ENST00000444712 NDUFAB1O14561 156 aa16.22■□□□□ 0.19
SNX13-204ENST00000444712 DGKIO75912 1065 aa16.22■□□□□ 0.19
SNX13-204ENST00000444712 PARNO95453 639 aaKnown RBP16.22■□□□□ 0.19
SNX13-204ENST00000444712 PITX1P78337 314 aaPredicted RBP16.22■□□□□ 0.19
SNX13-204ENST00000444712 BSPRYQ5W0U4 402 aa16.22■□□□□ 0.19
SNX13-204ENST00000444712 RFX8Q6ZV50 586 aa16.22■□□□□ 0.19
SNX13-204ENST00000444712 BHLHA9Q7RTU4 235 aa16.22■□□□□ 0.19
SNX13-204ENST00000444712 TADA2BQ86TJ2 420 aa16.22■□□□□ 0.19
SNX13-204ENST00000444712 ZNF280BQ86YH2 543 aa16.22■□□□□ 0.19
SNX13-204ENST00000444712 PALM2Q8IXS6 379 aa16.22■□□□□ 0.19
SNX13-204ENST00000444712 PYROXD2Q8N2H3 581 aa16.22■□□□□ 0.19
SNX13-204ENST00000444712 MCUQ8NE86 351 aa16.22■□□□□ 0.19
SNX13-204ENST00000444712 ZCWPW1Q9H0M4 648 aa16.22■□□□□ 0.19
SNX13-204ENST00000444712 TMLHEQ9NVH6 421 aa16.22■□□□□ 0.19
SNX13-204ENST00000444712 LRFN2Q9ULH4 789 aa16.22■□□□□ 0.19
SNX13-204ENST00000444712 PLXNA3P51805 1871 aa16.21■□□□□ 0.19
SNX13-204ENST00000444712 NCAM2O15394 837 aa16.21■□□□□ 0.19
SNX13-204ENST00000444712 TADA2AO75478 443 aa16.21■□□□□ 0.19
SNX13-204ENST00000444712 TPSB2P20231 275 aa16.21■□□□□ 0.19
SNX13-204ENST00000444712 FDFT1P37268 417 aa16.21■□□□□ 0.19
SNX13-204ENST00000444712 CXCR3P49682 368 aa16.21■□□□□ 0.19
SNX13-204ENST00000444712 DPYSQ14117 519 aa16.21■□□□□ 0.19
SNX13-204ENST00000444712 FASTKD3Q14CZ7 662 aaKnown RBP16.21■□□□□ 0.19
SNX13-204ENST00000444712 TPSAB1Q15661 275 aa16.21■□□□□ 0.19
SNX13-204ENST00000444712 FNBP1LQ5T0N5 605 aa16.21■□□□□ 0.19
SNX13-204ENST00000444712 ARHGEF18Q6ZSZ5 1173 aa16.21■□□□□ 0.19
SNX13-204ENST00000444712 LRRTM3Q86VH5 581 aa16.21■□□□□ 0.19
SNX13-204ENST00000444712 EXOC3L1Q86VI1 746 aa16.21■□□□□ 0.19
SNX13-204ENST00000444712 HTR3CQ8WXA8 447 aa16.21■□□□□ 0.19
SNX13-204ENST00000444712 LRRC39Q96DD0 335 aa16.21■□□□□ 0.19
SNX13-204ENST00000444712 EPAS1Q99814 870 aa16.21■□□□□ 0.19
SNX13-204ENST00000444712 COLEC11Q9BWP8 271 aa16.21■□□□□ 0.19
SNX13-204ENST00000444712 RHOBTB2Q9BYZ6 727 aa16.21■□□□□ 0.19
SNX13-204ENST00000444712 BRD8Q9H0E9 1235 aa16.21■□□□□ 0.19
SNX13-204ENST00000444712 WDCPQ9H6R7 721 aa16.21■□□□□ 0.19
SNX13-204ENST00000444712 ABCC13Q9NSE7 274 aa16.21■□□□□ 0.19
SNX13-204ENST00000444712 INTS9Q9NV88 658 aaKnown RBP16.21■□□□□ 0.19
SNX13-204ENST00000444712 EURLQ9NYK6 297 aa16.21■□□□□ 0.19
SNX13-204ENST00000444712 GMNCA6NCL1 334 aa16.21■□□□□ 0.18
SNX13-204ENST00000444712 CREB3O43889 395 aa16.21■□□□□ 0.18
SNX13-204ENST00000444712 CHN1P15882 459 aa16.21■□□□□ 0.18
SNX13-204ENST00000444712 GRIK1P39086 918 aa16.21■□□□□ 0.18
SNX13-204ENST00000444712 GLUD2P49448 558 aa16.21■□□□□ 0.18
SNX13-204ENST00000444712 TPI1P60174 286 aa16.21■□□□□ 0.18
SNX13-204ENST00000444712 SARNPP82979 210 aaKnown RBP16.21■□□□□ 0.18
SNX13-204ENST00000444712 SLC10A2Q12908 348 aaPredicted RBP16.21■□□□□ 0.18
SNX13-204ENST00000444712 SEMA3BQ13214 749 aa16.21■□□□□ 0.18
SNX13-204ENST00000444712 BBS9Q3SYG4 887 aa16.21■□□□□ 0.18
SNX13-204ENST00000444712 VSTM1Q6UX27 236 aa16.21■□□□□ 0.18
SNX13-204ENST00000444712 CCDC13Q8IYE1 715 aa16.21■□□□□ 0.18
SNX13-204ENST00000444712 FBXO36Q8NEA4 188 aa16.21■□□□□ 0.18
SNX13-204ENST00000444712 TMEM209Q96SK2 561 aa16.21■□□□□ 0.18
SNX13-204ENST00000444712 MRPL9Q9BYD2 267 aaKnown RBP16.21■□□□□ 0.18
SNX13-204ENST00000444712 TCRBV7S3A2A0A539 114 aa16.2■□□□□ 0.18
SNX13-204ENST00000444712 ENPP3O14638 875 aa16.2■□□□□ 0.18
SNX13-204ENST00000444712 TRIM66O15016 1216 aa16.2■□□□□ 0.18
SNX13-204ENST00000444712 MFSD11O43934 449 aa16.2■□□□□ 0.18
SNX13-204ENST00000444712 NBNO60934 754 aa16.2■□□□□ 0.18
SNX13-204ENST00000444712 FAM107AO95990 144 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms