RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 NUGGCQ68CJ6 796 aa19.42■□□□□ 0.7
CCDC188-202ENST00000444532 HEATR6Q6AI08 1181 aaKnown RBP19.42■□□□□ 0.7
CCDC188-202ENST00000444532 SFTPA1Q8IWL2 248 aa19.42■□□□□ 0.7
CCDC188-202ENST00000444532 AZIN2Q96A70 460 aa19.42■□□□□ 0.7
CCDC188-202ENST00000444532 CPXM1Q96SM3 734 aa19.42■□□□□ 0.7
CCDC188-202ENST00000444532 PDCL3Q9H2J4 239 aa19.42■□□□□ 0.7
CCDC188-202ENST00000444532 POPDC2Q9HBU9 364 aa19.42■□□□□ 0.7
CCDC188-202ENST00000444532 NAALADL1Q9UQQ1 740 aa19.42■□□□□ 0.7
CCDC188-202ENST00000444532 SIK3Q9Y2K2 1263 aa19.42■□□□□ 0.7
CCDC188-202ENST00000444532 STARD13Q9Y3M8 1113 aa19.42■□□□□ 0.7
CCDC188-202ENST00000444532 CISD3P0C7P0 127 aa19.41■□□□□ 0.7
CCDC188-202ENST00000444532 CHRM1P11229 460 aaPredicted RBP19.41■□□□□ 0.7
CCDC188-202ENST00000444532 TIE1P35590 1138 aa19.41■□□□□ 0.7
CCDC188-202ENST00000444532 KLK7P49862 253 aa19.41■□□□□ 0.7
CCDC188-202ENST00000444532 TBX4P57082 545 aa19.41■□□□□ 0.7
CCDC188-202ENST00000444532 POLR2FP61218 127 aaKnown RBP19.41■□□□□ 0.7
CCDC188-202ENST00000444532 UBXN1Q04323 297 aa19.41■□□□□ 0.7
CCDC188-202ENST00000444532 EFHC1Q5JVL4 640 aa19.41■□□□□ 0.7
CCDC188-202ENST00000444532 C10orf76Q5T2E6 689 aa19.41■□□□□ 0.7
CCDC188-202ENST00000444532 TRMT11Q7Z4G4 463 aaKnown RBP19.41■□□□□ 0.7
CCDC188-202ENST00000444532 IL17RCQ8NAC3 791 aa19.41■□□□□ 0.7
CCDC188-202ENST00000444532 TMEM35BQ8NCS4 154 aa19.41■□□□□ 0.7
CCDC188-202ENST00000444532 C1orf131Q8NDD1 294 aaKnown RBP19.41■□□□□ 0.7
CCDC188-202ENST00000444532 DQX1Q8TE96 717 aaKnown RBP19.41■□□□□ 0.7
CCDC188-202ENST00000444532 BHMTQ93088 406 aa19.41■□□□□ 0.7
CCDC188-202ENST00000444532 SERPINB11Q96P15 392 aa19.41■□□□□ 0.7
CCDC188-202ENST00000444532 IRX2Q9BZI1 471 aaPredicted RBP19.41■□□□□ 0.7
CCDC188-202ENST00000444532 FAM207AQ9NSI2 230 aaPredicted RBP19.41■□□□□ 0.7
CCDC188-202ENST00000444532 POLR3BQ9NW08 1133 aaPredicted RBP19.41■□□□□ 0.7
CCDC188-202ENST00000444532 ASNSD1Q9NWL6 643 aa19.41■□□□□ 0.7
CCDC188-202ENST00000444532 PLK2Q9NYY3 685 aa19.41■□□□□ 0.7
CCDC188-202ENST00000444532 TLR6Q9Y2C9 796 aa19.41■□□□□ 0.7
CCDC188-202ENST00000444532 USP34Q70CQ2 3546 aa19.41■□□□□ 0.7
CCDC188-202ENST00000444532 MYO15AQ9UKN7 3530 aa19.4■□□□□ 0.7
CCDC188-202ENST00000444532 ANTXRLA6NF34 631 aa19.4■□□□□ 0.7
CCDC188-202ENST00000444532 TRIM24O15164 1050 aa19.4■□□□□ 0.7
CCDC188-202ENST00000444532 HRO43593 1189 aa19.4■□□□□ 0.7
CCDC188-202ENST00000444532 KLF8O95600 359 aaPredicted RBP19.4■□□□□ 0.7
CCDC188-202ENST00000444532 APBB3O95704 486 aa19.4■□□□□ 0.7
CCDC188-202ENST00000444532 CDH5P33151 784 aaPredicted RBP19.4■□□□□ 0.7
CCDC188-202ENST00000444532 SLC11A2P49281 568 aa19.4■□□□□ 0.7
CCDC188-202ENST00000444532 SYCP1Q15431 976 aa19.4■□□□□ 0.7
CCDC188-202ENST00000444532 MPPE1Q53F39 396 aa19.4■□□□□ 0.7
CCDC188-202ENST00000444532 EOGTQ5NDL2 527 aa19.4■□□□□ 0.7
CCDC188-202ENST00000444532 EMC10Q5UCC4 262 aa19.4■□□□□ 0.7
CCDC188-202ENST00000444532 SYPL2Q5VXT5 272 aa19.4■□□□□ 0.7
CCDC188-202ENST00000444532 APTXQ7Z2E3 356 aaKnown RBP19.4■□□□□ 0.7
CCDC188-202ENST00000444532 CCDC33Q8N5R6 958 aa19.4■□□□□ 0.7
CCDC188-202ENST00000444532 ALLCQ8N6M5 410 aa19.4■□□□□ 0.7
CCDC188-202ENST00000444532 DDI1Q8WTU0 396 aa19.4■□□□□ 0.7
CCDC188-202ENST00000444532 DDX1Q92499 740 aaKnown RBP19.4■□□□□ 0.7
CCDC188-202ENST00000444532 HHIPQ96QV1 700 aa19.4■□□□□ 0.7
CCDC188-202ENST00000444532 ERGIC2Q96RQ1 377 aa19.4■□□□□ 0.7
CCDC188-202ENST00000444532 SLC2A11Q9BYW1 496 aa19.4■□□□□ 0.7
CCDC188-202ENST00000444532 TJP2Q9UDY2 1190 aa19.4■□□□□ 0.7
CCDC188-202ENST00000444532 EBF1Q9UH73 591 aa19.4■□□□□ 0.7
CCDC188-202ENST00000444532 SLC27A6Q9Y2P4 619 aa19.4■□□□□ 0.7
CCDC188-202ENST00000444532 HOXC13P31276 330 aa19.39■□□□□ 0.69
CCDC188-202ENST00000444532 ZNF165P49910 485 aa19.39■□□□□ 0.69
CCDC188-202ENST00000444532 DGKEP52429 567 aa19.39■□□□□ 0.69
CCDC188-202ENST00000444532 JAM2P57087 298 aa19.39■□□□□ 0.69
CCDC188-202ENST00000444532 CRY1Q16526 586 aa19.39■□□□□ 0.69
CCDC188-202ENST00000444532 TOGARAM2Q6ZUX3 1019 aa19.39■□□□□ 0.69
CCDC188-202ENST00000444532 NOP9Q86U38 636 aaKnown RBP19.39■□□□□ 0.69
CCDC188-202ENST00000444532 ZNF677Q86XU0 584 aa19.39■□□□□ 0.69
CCDC188-202ENST00000444532 ZDHHC17Q8IUH5 632 aa19.39■□□□□ 0.69
CCDC188-202ENST00000444532 DHX40Q8IX18 779 aaKnown RBP19.39■□□□□ 0.69
CCDC188-202ENST00000444532 ZNF513Q8N8E2 541 aaPredicted RBP19.39■□□□□ 0.69
CCDC188-202ENST00000444532 TXNDC5Q8NBS9 432 aaKnown RBP19.39■□□□□ 0.69
CCDC188-202ENST00000444532 NEK11Q8NG66 645 aa19.39■□□□□ 0.69
CCDC188-202ENST00000444532 IPO4Q8TEX9 1081 aaKnown RBP19.39■□□□□ 0.69
CCDC188-202ENST00000444532 RUBCNQ92622 972 aa19.39■□□□□ 0.69
CCDC188-202ENST00000444532 P2RY11Q96G91 374 aa19.39■□□□□ 0.69
CCDC188-202ENST00000444532 PCMTD1Q96MG8 357 aaPredicted RBP19.39■□□□□ 0.69
CCDC188-202ENST00000444532 FUCA2Q9BTY2 467 aa19.39■□□□□ 0.69
CCDC188-202ENST00000444532 SYNCQ9H7C4 482 aa19.39■□□□□ 0.69
CCDC188-202ENST00000444532 RAB23Q9ULC3 237 aa19.39■□□□□ 0.69
CCDC188-202ENST00000444532 SMG5Q9UPR3 1016 aaKnown RBP19.39■□□□□ 0.69
CCDC188-202ENST00000444532 GFRA2O00451 464 aa19.38■□□□□ 0.69
CCDC188-202ENST00000444532 AXIN1O15169 862 aa19.38■□□□□ 0.69
CCDC188-202ENST00000444532 IRAK2O43187 625 aa19.38■□□□□ 0.69
CCDC188-202ENST00000444532 ACSL4O60488 711 aa19.38■□□□□ 0.69
CCDC188-202ENST00000444532 HSF2BPO75031 334 aa19.38■□□□□ 0.69
CCDC188-202ENST00000444532 LSM8O95777 96 aaKnown RBP19.38■□□□□ 0.69
CCDC188-202ENST00000444532 ERBB2P04626 1255 aa19.38■□□□□ 0.69
CCDC188-202ENST00000444532 ATP1A3P13637 1013 aa19.38■□□□□ 0.69
CCDC188-202ENST00000444532 SOX5P35711 763 aa19.38■□□□□ 0.69
CCDC188-202ENST00000444532 PXNP49023 591 aaPredicted RBP19.38■□□□□ 0.69
CCDC188-202ENST00000444532 SLC6A3Q01959 620 aa19.38■□□□□ 0.69
CCDC188-202ENST00000444532 SIM2Q14190 667 aaPredicted RBP19.38■□□□□ 0.69
CCDC188-202ENST00000444532 TAF5Q15542 800 aa19.38■□□□□ 0.69
CCDC188-202ENST00000444532 PTPN20Q4JDL3 420 aa19.38■□□□□ 0.69
CCDC188-202ENST00000444532 OR6B2Q6IFH4 312 aa19.38■□□□□ 0.69
CCDC188-202ENST00000444532 TSTD1Q8NFU3 115 aa19.38■□□□□ 0.69
CCDC188-202ENST00000444532 EPS8L1Q8TE68 723 aa19.38■□□□□ 0.69
CCDC188-202ENST00000444532 TMA16Q96EY4 203 aaKnown RBP19.38■□□□□ 0.69
CCDC188-202ENST00000444532 SLC39A13Q96H72 371 aa19.38■□□□□ 0.69
CCDC188-202ENST00000444532 FCRL2Q96LA5 508 aaPredicted RBP19.38■□□□□ 0.69
CCDC188-202ENST00000444532 SPAG5Q96R06 1193 aa19.38■□□□□ 0.69
CCDC188-202ENST00000444532 DDX50Q9BQ39 737 aaKnown RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms