RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 HOXA2O43364 376 aa10.93□□□□□ -0.66
TOP3B-210ENST00000444502 HNRNPRO43390 633 aaKnown RBP10.93□□□□□ -0.66
TOP3B-210ENST00000444502 CIB2O75838 187 aa10.93□□□□□ -0.66
TOP3B-210ENST00000444502 KRT38O76015 456 aa10.93□□□□□ -0.66
TOP3B-210ENST00000444502 DARSP14868 501 aaKnown RBP10.93□□□□□ -0.66
TOP3B-210ENST00000444502 MMP8P22894 467 aa10.93□□□□□ -0.66
TOP3B-210ENST00000444502 PTGIRP43119 386 aa10.93□□□□□ -0.66
TOP3B-210ENST00000444502 LHX1P48742 406 aa10.93□□□□□ -0.66
TOP3B-210ENST00000444502 PRAMEP78395 509 aa10.93□□□□□ -0.66
TOP3B-210ENST00000444502 TWF1Q12792 350 aa10.93□□□□□ -0.66
TOP3B-210ENST00000444502 IKBKEQ14164 716 aa10.93□□□□□ -0.66
TOP3B-210ENST00000444502 RPS6KA2Q15349 733 aa10.93□□□□□ -0.66
TOP3B-210ENST00000444502 PKN2Q16513 984 aaKnown RBP10.93□□□□□ -0.66
TOP3B-210ENST00000444502 KBTBD12Q3ZCT8 623 aa10.93□□□□□ -0.66
TOP3B-210ENST00000444502 TMEM63BQ5T3F8 832 aa10.93□□□□□ -0.66
TOP3B-210ENST00000444502 RNF135Q8IUD6 432 aa10.93□□□□□ -0.66
TOP3B-210ENST00000444502 ATPAF2Q8N5M1 289 aa10.93□□□□□ -0.66
TOP3B-210ENST00000444502 MAGEC3Q8TD91 643 aa10.93□□□□□ -0.66
TOP3B-210ENST00000444502 DDX50Q9BQ39 737 aaKnown RBP10.93□□□□□ -0.66
TOP3B-210ENST00000444502 CNPY3Q9BT09 278 aa10.93□□□□□ -0.66
TOP3B-210ENST00000444502 EIF2AQ9BY44 585 aaKnown RBP10.93□□□□□ -0.66
TOP3B-210ENST00000444502 ARHGAP39Q9C0H5 1083 aa10.93□□□□□ -0.66
TOP3B-210ENST00000444502 PIH1D1Q9NWS0 290 aaKnown RBP10.93□□□□□ -0.66
TOP3B-210ENST00000444502 PPARGC1AQ9UBK2 798 aaKnown RBP10.93□□□□□ -0.66
TOP3B-210ENST00000444502 CACNG4Q9UBN1 327 aa10.93□□□□□ -0.66
TOP3B-210ENST00000444502 RBM47A0AV96 593 aaKnown RBP10.93□□□□□ -0.66
TOP3B-210ENST00000444502 ATICP31939 592 aa10.93□□□□□ -0.66
TOP3B-210ENST00000444502 HARS2P49590 506 aaKnown RBP10.93□□□□□ -0.66
TOP3B-210ENST00000444502 MPP3Q13368 585 aa10.93□□□□□ -0.66
TOP3B-210ENST00000444502 NFE2Q16621 373 aaPredicted RBP10.93□□□□□ -0.66
TOP3B-210ENST00000444502 BOLA3Q53S33 107 aa10.93□□□□□ -0.66
TOP3B-210ENST00000444502 EXOC3L1Q86VI1 746 aa10.93□□□□□ -0.66
TOP3B-210ENST00000444502 STKLD1Q8NE28 680 aa10.93□□□□□ -0.66
TOP3B-210ENST00000444502 HDAC11Q96DB2 347 aa10.93□□□□□ -0.66
TOP3B-210ENST00000444502 TRIM62Q9BVG3 475 aa10.93□□□□□ -0.66
TOP3B-210ENST00000444502 TXLNGQ9NUQ3 528 aa10.93□□□□□ -0.66
TOP3B-210ENST00000444502 TUBGCP4Q9UGJ1 667 aa10.93□□□□□ -0.66
TOP3B-210ENST00000444502 ZFP69BQ9UJL9 534 aa10.93□□□□□ -0.66
TOP3B-210ENST00000444502 FAF1Q9UNN5 650 aaPredicted RBP10.93□□□□□ -0.66
TOP3B-210ENST00000444502 PPME1Q9Y570 386 aa10.93□□□□□ -0.66
TOP3B-210ENST00000444502 COL22A1Q8NFW1 1626 aaPredicted RBP10.93□□□□□ -0.66
TOP3B-210ENST00000444502 PTPRJQ12913 1337 aa10.93□□□□□ -0.66
TOP3B-210ENST00000444502 UBA6A0AVT1 1052 aaPredicted RBP10.92□□□□□ -0.66
TOP3B-210ENST00000444502 PMPCBO75439 489 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 CABYRO75952 493 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 MYL4P12829 197 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 UNGP13051 313 aaPredicted RBP10.92□□□□□ -0.66
TOP3B-210ENST00000444502 CREB1P16220 341 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 CRYBB1P53674 252 aaPredicted RBP10.92□□□□□ -0.66
TOP3B-210ENST00000444502 MON1BQ7L1V2 547 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 TAS1R3Q7RTX0 852 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 SAPCD2Q86UD0 394 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 GBP7Q8N8V2 638 aaPredicted RBP10.92□□□□□ -0.66
TOP3B-210ENST00000444502 NETO2Q8NC67 525 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 CFAP61Q8NHU2 1237 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 GPR152Q8TDT2 470 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 APOL2Q9BQE5 337 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 FOXP3Q9BZS1 431 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 GRHL1Q9NZI5 618 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 TMEM191CA6NGB0 347 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 USP17L7P0C7H9 530 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 ESRRAP11474 423 aaPredicted RBP10.92□□□□□ -0.66
TOP3B-210ENST00000444502 TCF4P15884 667 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 GSTT1P30711 240 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 BST2Q10589 180 aaKnown RBP10.92□□□□□ -0.66
TOP3B-210ENST00000444502 SLC12A1Q13621 1099 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 SLC44A4Q53GD3 710 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 GRAMD4Q6IC98 578 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 B3GNT9Q6UX72 402 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 CRELD2Q6UXH1 353 aaPredicted RBP10.92□□□□□ -0.66
TOP3B-210ENST00000444502 DDX53Q86TM3 631 aaKnown RBP10.92□□□□□ -0.66
TOP3B-210ENST00000444502 LCA5Q86VQ0 697 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 IPMKQ8NFU5 416 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 FBXL18Q96ME1 805 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 NIFKQ9BYG3 293 aaKnown RBP10.92□□□□□ -0.66
TOP3B-210ENST00000444502 DDX60LQ5H9U9 1706 aaKnown RBP10.92□□□□□ -0.66
TOP3B-210ENST00000444502 CCDC85CA6NKD9 419 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 CLDN5O00501 218 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 LIASO43766 372 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 CYBBP04839 570 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 KRT16P08779 473 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 AXLP30530 894 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 ICAM3P32942 547 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 ARFIP2P53365 341 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 POU5F1BQ06416 359 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 MORF4L2Q15014 288 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 MROH9Q5TGP6 573 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 NANOGNBQ7Z5D8 188 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 TFAP2DQ7Z6R9 452 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 SPATA24Q86W54 205 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 YAF2Q8IY57 180 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 SLC25A41Q8N5S1 370 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 ERLEC1Q96DZ1 483 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 SCLYQ96I15 445 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 CPXM1Q96SM3 734 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 YIPF2Q9BWQ6 316 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 UBE2OQ9C0C9 1292 aaKnown RBP10.92□□□□□ -0.66
TOP3B-210ENST00000444502 PRDM16Q9HAZ2 1276 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 PAK5Q9P286 719 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 KIAA1257Q9ULG3 409 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms