RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 MAMLD1Q13495 774 aa14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 THEMIS2Q5TEJ8 643 aa14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 BAP1Q92560 729 aa14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 STMN2Q93045 179 aa14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 TAS2R14Q9NYV8 317 aa14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 HACD3Q9P035 362 aa14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 RASA4BC9J798 803 aa14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 RASA4O43374 803 aa14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 POLBP06746 335 aa14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 GLI1P08151 1106 aa14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 PTPN2P17706 415 aa14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 KCNA4P22459 653 aa14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 BCAS4Q8TDM0 211 aa14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 ATXN7L3BQ96GX2 97 aa14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 LHX5Q9H2C1 402 aa14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 BRD9Q9H8M2 597 aa14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 ARHGEF38Q9NXL2 777 aa14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 PHF24Q9UPV7 400 aa14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 WARSP23381 471 aaKnown RBP14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 MATKP42679 507 aa14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 CASP8Q14790 479 aa14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 PPIL6Q8IXY8 311 aa14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 ZSWIM2Q8NEG5 633 aa14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 PIK3R5Q8WYR1 880 aa14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 RAD9AQ99638 391 aa14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 BRD8Q9H0E9 1235 aa14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 PTRHD1Q6GMV3 140 aaKnown RBP14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 TBC1D1Q86TI0 1168 aaPredicted RBP14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 C2orf15Q8WU43 125 aaKnown RBP14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 SNX19Q92543 992 aa14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 PCED1BQ96HM7 432 aa14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 FOPNLQ96NB1 174 aa14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 ADGRE3Q9BY15 652 aa14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 MRPL42Q9Y6G3 142 aaKnown RBP14.54□□□□□ -0.08
SMARCA4-204ENST00000444061 N4BP2Q86UW6 1770 aaPredicted RBP14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 MYBPHLA2RUH7 354 aa14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 SLC5A3P53794 718 aa14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 TRIM67Q6ZTA4 783 aa14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 RNF135Q8IUD6 432 aa14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 GSPT2Q8IYD1 628 aaKnown RBP14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 HJURPQ8NCD3 748 aaPredicted RBP14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 ZNF669Q96BR6 464 aaPredicted RBP14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 BBS2Q9BXC9 721 aa14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 MCOLN1Q9GZU1 580 aa14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 CHMP2BQ9UQN3 213 aa14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 LRP5O75197 1615 aa14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 FGF10O15520 208 aaPredicted RBP14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 DAB1O75553 588 aa14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 PCDH8O95206 1070 aa14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 IGSF6O95976 241 aa14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 FASTKD1Q53R41 847 aaKnown RBP14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 ULK4Q96C45 1275 aa14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 HNRNPABQ99729 332 aaKnown RBP14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 SYNDIG1Q9H7V2 258 aa14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 C20orf96Q9NUD7 363 aaPredicted RBP14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 UBA2Q9UBT2 640 aaPredicted RBP14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 IGKV6D-21A0A0A0MT36 114 aa14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 TBC1D4O60343 1298 aa14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 ZNF284Q2VY69 593 aa14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 TPGS2Q68CL5 300 aa14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 C9orf72Q96LT7 481 aa14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 GMIPQ9P107 970 aa14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 CNTN3Q9P232 1028 aa14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 KCNE1P15382 129 aa14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 RAD23BP54727 409 aa14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 MTM1Q13496 603 aa14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 FAM43BQ6ZT52 329 aaPredicted RBP14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 SRRM1Q8IYB3 904 aaKnown RBP14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 LNX1Q8TBB1 728 aaPredicted RBP14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 FAXDC2Q96IV6 333 aa14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 SUSD3Q96L08 255 aa14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 TGS1Q96RS0 853 aaKnown RBP14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 ERP44Q9BS26 406 aa14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 LATS2Q9NRM7 1088 aa14.53□□□□□ -0.08
SMARCA4-204ENST00000444061 WDR91A4D1P6 747 aa14.52□□□□□ -0.08
SMARCA4-204ENST00000444061 RARS2Q5T160 578 aaKnown RBP14.52□□□□□ -0.08
SMARCA4-204ENST00000444061 MFSD7Q6UXD7 560 aa14.52□□□□□ -0.08
SMARCA4-204ENST00000444061 FUBP3Q96I24 572 aaKnown RBP eCLIP14.52□□□□□ -0.08
SMARCA4-204ENST00000444061 AGO3Q9H9G7 860 aaKnown RBP14.52□□□□□ -0.08
SMARCA4-204ENST00000444061 A0A1W2PQH9 124 aa14.52□□□□□ -0.08
SMARCA4-204ENST00000444061 KPNA3O00505 521 aaPredicted RBP14.52□□□□□ -0.08
SMARCA4-204ENST00000444061 SLC11A1P49279 550 aa14.52□□□□□ -0.08
SMARCA4-204ENST00000444061 STX1BP61266 288 aa14.52□□□□□ -0.08
SMARCA4-204ENST00000444061 TDRD5Q8NAT2 981 aaKnown RBP14.52□□□□□ -0.08
SMARCA4-204ENST00000444061 CFAP97Q9P2B7 532 aa14.52□□□□□ -0.08
SMARCA4-204ENST00000444061 ZNF510Q9Y2H8 683 aa14.52□□□□□ -0.08
SMARCA4-204ENST00000444061 RAD51CO43502 376 aa14.52□□□□□ -0.09
SMARCA4-204ENST00000444061 TBL1XO60907 577 aa14.52□□□□□ -0.09
SMARCA4-204ENST00000444061 GKAP1Q5VSY0 366 aaPredicted RBP14.52□□□□□ -0.09
SMARCA4-204ENST00000444061 KAT2BQ92831 832 aa14.52□□□□□ -0.09
SMARCA4-204ENST00000444061 TBC1D14Q9P2M4 693 aa14.52□□□□□ -0.09
SMARCA4-204ENST00000444061 SFMBT1Q9UHJ3 866 aa14.52□□□□□ -0.09
SMARCA4-204ENST00000444061 BAIAP3O94812 1187 aa14.52□□□□□ -0.09
SMARCA4-204ENST00000444061 RARAP10276 462 aa14.52□□□□□ -0.09
SMARCA4-204ENST00000444061 NR2C2P49116 596 aa14.52□□□□□ -0.09
SMARCA4-204ENST00000444061 CLCN6P51797 869 aa14.52□□□□□ -0.09
SMARCA4-204ENST00000444061 ITGA8P53708 1063 aa14.52□□□□□ -0.09
SMARCA4-204ENST00000444061 NNTQ13423 1086 aa14.52□□□□□ -0.09
SMARCA4-204ENST00000444061 PDAP1Q13442 181 aaKnown RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms