RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 NFE2L3Q9Y4A8 694 aa19.65■□□□□ 0.74
ATPAF2-201ENST00000444058 FRYLO94915 3013 aa19.65■□□□□ 0.74
ATPAF2-201ENST00000444058 PRRT4C9JH25 899 aa19.64■□□□□ 0.73
ATPAF2-201ENST00000444058 GFRA2O00451 464 aa19.64■□□□□ 0.73
ATPAF2-201ENST00000444058 PIK3R2O00459 728 aa19.64■□□□□ 0.73
ATPAF2-201ENST00000444058 NPC1O15118 1278 aa19.64■□□□□ 0.73
ATPAF2-201ENST00000444058 MBD3O95983 291 aa19.64■□□□□ 0.73
ATPAF2-201ENST00000444058 NTSR1P30989 418 aa19.64■□□□□ 0.73
ATPAF2-201ENST00000444058 USP8P40818 1118 aa19.64■□□□□ 0.73
ATPAF2-201ENST00000444058 LMNB2Q03252 620 aa19.64■□□□□ 0.73
ATPAF2-201ENST00000444058 E2F5Q15329 346 aa19.64■□□□□ 0.73
ATPAF2-201ENST00000444058 MPPE1Q53F39 396 aa19.64■□□□□ 0.73
ATPAF2-201ENST00000444058 NUGGCQ68CJ6 796 aa19.64■□□□□ 0.73
ATPAF2-201ENST00000444058 ANO7Q6IWH7 933 aa19.64■□□□□ 0.73
ATPAF2-201ENST00000444058 DPY19L2P1Q6NXN4 242 aa19.64■□□□□ 0.73
ATPAF2-201ENST00000444058 MDGA1Q8NFP4 955 aa19.64■□□□□ 0.73
ATPAF2-201ENST00000444058 OLIG1Q8TAK6 271 aa19.64■□□□□ 0.73
ATPAF2-201ENST00000444058 CLEC4CQ8WTT0 213 aa19.64■□□□□ 0.73
ATPAF2-201ENST00000444058 P2RY11Q96G91 374 aa19.64■□□□□ 0.73
ATPAF2-201ENST00000444058 MIS12Q9H081 205 aa19.64■□□□□ 0.73
ATPAF2-201ENST00000444058 ACP6Q9NPH0 428 aa19.64■□□□□ 0.73
ATPAF2-201ENST00000444058 PLK2Q9NYY3 685 aa19.64■□□□□ 0.73
ATPAF2-201ENST00000444058 HCN2Q9UL51 889 aa19.64■□□□□ 0.73
ATPAF2-201ENST00000444058 PRR5-ARHGAP8B1AHC4 643 aa19.63■□□□□ 0.73
ATPAF2-201ENST00000444058 FYNP06241 537 aa19.63■□□□□ 0.73
ATPAF2-201ENST00000444058 NCAM1P13591 858 aa19.63■□□□□ 0.73
ATPAF2-201ENST00000444058 HNRNPLP14866 589 aaKnown RBP eCLIP19.63■□□□□ 0.73
ATPAF2-201ENST00000444058 SDHBP21912 280 aa19.63■□□□□ 0.73
ATPAF2-201ENST00000444058 BPIFB4P59827 614 aa19.63■□□□□ 0.73
ATPAF2-201ENST00000444058 ARHGAP8P85298 464 aa19.63■□□□□ 0.73
ATPAF2-201ENST00000444058 PDCLQ13371 301 aa19.63■□□□□ 0.73
ATPAF2-201ENST00000444058 CSRP2Q16527 193 aa19.63■□□□□ 0.73
ATPAF2-201ENST00000444058 PLK5Q496M5 336 aa19.63■□□□□ 0.73
ATPAF2-201ENST00000444058 CDKAL1Q5VV42 579 aa19.63■□□□□ 0.73
ATPAF2-201ENST00000444058 SDE2Q6IQ49 451 aa19.63■□□□□ 0.73
ATPAF2-201ENST00000444058 TOGARAM2Q6ZUX3 1019 aa19.63■□□□□ 0.73
ATPAF2-201ENST00000444058 KBTBD6Q86V97 674 aa19.63■□□□□ 0.73
ATPAF2-201ENST00000444058 FAM71AQ8IYT1 594 aa19.63■□□□□ 0.73
ATPAF2-201ENST00000444058 BHMTQ93088 406 aa19.63■□□□□ 0.73
ATPAF2-201ENST00000444058 SERPINB11Q96P15 392 aa19.63■□□□□ 0.73
ATPAF2-201ENST00000444058 CYTH4Q9UIA0 394 aa19.63■□□□□ 0.73
ATPAF2-201ENST00000444058 PCDHGA5Q9Y5G8 931 aa19.63■□□□□ 0.73
ATPAF2-201ENST00000444058 E5RJQ4 531 aa19.62■□□□□ 0.73
ATPAF2-201ENST00000444058 FOXN3O00409 490 aaPredicted RBP19.62■□□□□ 0.73
ATPAF2-201ENST00000444058 PAPSS1O43252 624 aaPredicted RBP19.62■□□□□ 0.73
ATPAF2-201ENST00000444058 MSI1O43347 362 aaKnown RBP19.62■□□□□ 0.73
ATPAF2-201ENST00000444058 RHOBTB1O94844 696 aa19.62■□□□□ 0.73
ATPAF2-201ENST00000444058 ID4P47928 161 aa19.62■□□□□ 0.73
ATPAF2-201ENST00000444058 SNX16P57768 344 aa19.62■□□□□ 0.73
ATPAF2-201ENST00000444058 YWHAZP63104 245 aaKnown RBP19.62■□□□□ 0.73
ATPAF2-201ENST00000444058 SPEM2Q0P670 501 aa19.62■□□□□ 0.73
ATPAF2-201ENST00000444058 KCNMA1Q12791 1236 aa19.62■□□□□ 0.73
ATPAF2-201ENST00000444058 EIF4HQ15056 248 aaKnown RBP19.62■□□□□ 0.73
ATPAF2-201ENST00000444058 ELF2Q15723 593 aa19.62■□□□□ 0.73
ATPAF2-201ENST00000444058 HSP90AA4PQ58FG1 418 aa19.62■□□□□ 0.73
ATPAF2-201ENST00000444058 MPP7Q5T2T1 576 aa19.62■□□□□ 0.73
ATPAF2-201ENST00000444058 SASS6Q6UVJ0 657 aa19.62■□□□□ 0.73
ATPAF2-201ENST00000444058 CHPFQ8IZ52 775 aa19.62■□□□□ 0.73
ATPAF2-201ENST00000444058 DDI1Q8WTU0 396 aa19.62■□□□□ 0.73
ATPAF2-201ENST00000444058 PIWIL1Q96J94 861 aaKnown RBP19.62■□□□□ 0.73
ATPAF2-201ENST00000444058 NOX5Q96PH1 765 aa19.62■□□□□ 0.73
ATPAF2-201ENST00000444058 GABRG3Q99928 467 aa19.62■□□□□ 0.73
ATPAF2-201ENST00000444058 PARD6AQ9NPB6 346 aa19.62■□□□□ 0.73
ATPAF2-201ENST00000444058 SEMA4GQ9NTN9 838 aa19.62■□□□□ 0.73
ATPAF2-201ENST00000444058 ANO10Q9NW15 660 aa19.62■□□□□ 0.73
ATPAF2-201ENST00000444058 TLR6Q9Y2C9 796 aa19.62■□□□□ 0.73
ATPAF2-201ENST00000444058 CEP250Q9BV73 2442 aa19.61■□□□□ 0.73
ATPAF2-201ENST00000444058 IRAK2O43187 625 aa19.61■□□□□ 0.73
ATPAF2-201ENST00000444058 TIMM44O43615 452 aa19.61■□□□□ 0.73
ATPAF2-201ENST00000444058 EPN2O95208 641 aa19.61■□□□□ 0.73
ATPAF2-201ENST00000444058 GLI1P08151 1106 aa19.61■□□□□ 0.73
ATPAF2-201ENST00000444058 HOXB2P14652 356 aa19.61■□□□□ 0.73
ATPAF2-201ENST00000444058 CLCN1P35523 988 aa19.61■□□□□ 0.73
ATPAF2-201ENST00000444058 SLC11A2P49281 568 aa19.61■□□□□ 0.73
ATPAF2-201ENST00000444058 TBX4P57082 545 aa19.61■□□□□ 0.73
ATPAF2-201ENST00000444058 BYSLQ13895 437 aaKnown RBP19.61■□□□□ 0.73
ATPAF2-201ENST00000444058 KLHDC7AQ5VTJ3 777 aa19.61■□□□□ 0.73
ATPAF2-201ENST00000444058 EGFLAMQ63HQ2 1017 aa19.61■□□□□ 0.73
ATPAF2-201ENST00000444058 WDTC1Q8N5D0 677 aa19.61■□□□□ 0.73
ATPAF2-201ENST00000444058 DQX1Q8TE96 717 aaKnown RBP19.61■□□□□ 0.73
ATPAF2-201ENST00000444058 FAM149B1Q96BN6 582 aa19.61■□□□□ 0.73
ATPAF2-201ENST00000444058 TMA16Q96EY4 203 aaKnown RBP19.61■□□□□ 0.73
ATPAF2-201ENST00000444058 NAA15Q9BXJ9 866 aaKnown RBP19.61■□□□□ 0.73
ATPAF2-201ENST00000444058 DUSP15Q9H1R2 295 aaPredicted RBP19.61■□□□□ 0.73
ATPAF2-201ENST00000444058 POPDC2Q9HBU9 364 aa19.61■□□□□ 0.73
ATPAF2-201ENST00000444058 ASNSD1Q9NWL6 643 aa19.61■□□□□ 0.73
ATPAF2-201ENST00000444058 AJAP1Q9UKB5 411 aaPredicted RBP19.61■□□□□ 0.73
ATPAF2-201ENST00000444058 USP18Q9UMW8 372 aa19.61■□□□□ 0.73
ATPAF2-201ENST00000444058 NAALADL1Q9UQQ1 740 aa19.61■□□□□ 0.73
ATPAF2-201ENST00000444058 A0A1W2PQF6 199 aa19.6■□□□□ 0.73
ATPAF2-201ENST00000444058 CAPN9O14815 690 aa19.6■□□□□ 0.73
ATPAF2-201ENST00000444058 UCHL3P15374 230 aa19.6■□□□□ 0.73
ATPAF2-201ENST00000444058 HOXD9P28356 352 aaPredicted RBP19.6■□□□□ 0.73
ATPAF2-201ENST00000444058 KRT9P35527 623 aa19.6■□□□□ 0.73
ATPAF2-201ENST00000444058 RNF43Q68DV7 783 aa19.6■□□□□ 0.73
ATPAF2-201ENST00000444058 ANKS1BQ7Z6G8 1248 aa19.6■□□□□ 0.73
ATPAF2-201ENST00000444058 SLC47A2Q86VL8 602 aa19.6■□□□□ 0.73
ATPAF2-201ENST00000444058 ZNF557Q8N988 423 aaPredicted RBP19.6■□□□□ 0.73
ATPAF2-201ENST00000444058 UCMAQ8WVF2 138 aa19.6■□□□□ 0.73
ATPAF2-201ENST00000444058 SLC39A13Q96H72 371 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms