RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 OTOL1A6NHN0 477 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-211ENST00000443563 SCAMP3O14828 347 aaKnown RBP11.28□□□□□ -0.6
HDAC6-211ENST00000443563 IRAK2O43187 625 aa11.28□□□□□ -0.6
HDAC6-211ENST00000443563 HOXC11O43248 304 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-211ENST00000443563 TRUB2O95900 331 aaKnown RBP11.28□□□□□ -0.6
HDAC6-211ENST00000443563 F9P00740 461 aa11.28□□□□□ -0.6
HDAC6-211ENST00000443563 IGLV3-27P01718 113 aa11.28□□□□□ -0.6
HDAC6-211ENST00000443563 GYPCP04921 128 aa11.28□□□□□ -0.6
HDAC6-211ENST00000443563 SERPING1P05155 500 aa11.28□□□□□ -0.6
HDAC6-211ENST00000443563 TARSP26639 723 aaKnown RBP11.28□□□□□ -0.6
HDAC6-211ENST00000443563 CASP14P31944 242 aa11.28□□□□□ -0.6
HDAC6-211ENST00000443563 MATKP42679 507 aa11.28□□□□□ -0.6
HDAC6-211ENST00000443563 GSCP56915 257 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-211ENST00000443563 PON2Q15165 354 aa11.28□□□□□ -0.6
HDAC6-211ENST00000443563 TAF5Q15542 800 aa11.28□□□□□ -0.6
HDAC6-211ENST00000443563 ANO4Q32M45 955 aa11.28□□□□□ -0.6
HDAC6-211ENST00000443563 FBXO43Q4G163 708 aa11.28□□□□□ -0.6
HDAC6-211ENST00000443563 TDRD12Q587J7 1177 aaKnown RBP11.28□□□□□ -0.6
HDAC6-211ENST00000443563 SYPL2Q5VXT5 272 aa11.28□□□□□ -0.6
HDAC6-211ENST00000443563 ACAD10Q6JQN1 1059 aa11.28□□□□□ -0.6
HDAC6-211ENST00000443563 MMS22LQ6ZRQ5 1243 aa11.28□□□□□ -0.6
HDAC6-211ENST00000443563 SND1Q7KZF4 910 aaKnown RBP eCLIP11.28□□□□□ -0.6
HDAC6-211ENST00000443563 TAC4Q86UU9 113 aa11.28□□□□□ -0.6
HDAC6-211ENST00000443563 VSTM4Q8IW00 320 aa11.28□□□□□ -0.6
HDAC6-211ENST00000443563 DRC7Q8IY82 874 aa11.28□□□□□ -0.6
HDAC6-211ENST00000443563 CCDC105Q8IYK2 499 aa11.28□□□□□ -0.6
HDAC6-211ENST00000443563 TMEM105Q8N8V8 129 aa11.28□□□□□ -0.6
HDAC6-211ENST00000443563 SLC30A5Q8TAD4 765 aa11.28□□□□□ -0.6
HDAC6-211ENST00000443563 WBP2Q969T9 261 aa11.28□□□□□ -0.6
HDAC6-211ENST00000443563 CLDN23Q96B33 292 aa11.28□□□□□ -0.6
HDAC6-211ENST00000443563 PIWIL1Q96J94 861 aaKnown RBP11.28□□□□□ -0.6
HDAC6-211ENST00000443563 PCDHB18PQ96TA0 734 aa11.28□□□□□ -0.6
HDAC6-211ENST00000443563 BBS2Q9BXC9 721 aa11.28□□□□□ -0.6
HDAC6-211ENST00000443563 FAM204AQ9H8W3 233 aa11.28□□□□□ -0.6
HDAC6-211ENST00000443563 ZNHIT6Q9NWK9 470 aaKnown RBP11.28□□□□□ -0.6
HDAC6-211ENST00000443563 MARK1Q9P0L2 795 aa11.28□□□□□ -0.6
HDAC6-211ENST00000443563 HCN4Q9Y3Q4 1203 aa11.28□□□□□ -0.6
HDAC6-211ENST00000443563 ANKRD62A6NC57 917 aa11.27□□□□□ -0.61
HDAC6-211ENST00000443563 SHISA7A6NL88 538 aa11.27□□□□□ -0.61
HDAC6-211ENST00000443563 GOLGA8SH3BPF8 625 aa11.27□□□□□ -0.61
HDAC6-211ENST00000443563 MSI1O43347 362 aaKnown RBP11.27□□□□□ -0.61
HDAC6-211ENST00000443563 PI15O43692 258 aa11.27□□□□□ -0.61
HDAC6-211ENST00000443563 GRAP2O75791 330 aa11.27□□□□□ -0.61
HDAC6-211ENST00000443563 IGLV3-25P01717 112 aa11.27□□□□□ -0.61
HDAC6-211ENST00000443563 KLKB1P03952 638 aa11.27□□□□□ -0.61
HDAC6-211ENST00000443563 DCNP07585 359 aaKnown RBP11.27□□□□□ -0.61
HDAC6-211ENST00000443563 GZMAP12544 262 aa11.27□□□□□ -0.61
HDAC6-211ENST00000443563 DESP17661 470 aa11.27□□□□□ -0.61
HDAC6-211ENST00000443563 CCR1P32246 355 aa11.27□□□□□ -0.61
HDAC6-211ENST00000443563 GALK1P51570 392 aa11.27□□□□□ -0.61
HDAC6-211ENST00000443563 VCPP55072 806 aaKnown RBP11.27□□□□□ -0.61
HDAC6-211ENST00000443563 RNASE9P60153 205 aaKnown RBP11.27□□□□□ -0.61
HDAC6-211ENST00000443563 SLC25A52Q3SY17 297 aa11.27□□□□□ -0.61
HDAC6-211ENST00000443563 MPPE1Q53F39 396 aa11.27□□□□□ -0.61
HDAC6-211ENST00000443563 TMEM196Q5HYL7 178 aa11.27□□□□□ -0.61
HDAC6-211ENST00000443563 ADGRF1Q5T601 910 aa11.27□□□□□ -0.61
HDAC6-211ENST00000443563 TXNDC11Q6PKC3 985 aa11.27□□□□□ -0.61
HDAC6-211ENST00000443563 ZNF571Q7Z3V5 609 aaPredicted RBP11.27□□□□□ -0.61
HDAC6-211ENST00000443563 TMEM25Q86YD3 366 aa11.27□□□□□ -0.61
HDAC6-211ENST00000443563 FAM217AQ8IXS0 508 aa11.27□□□□□ -0.61
HDAC6-211ENST00000443563 ATP6V0D2Q8N8Y2 350 aa11.27□□□□□ -0.61
HDAC6-211ENST00000443563 OR8K1Q8NGG5 319 aa11.27□□□□□ -0.61
HDAC6-211ENST00000443563 RNF34Q969K3 372 aa11.27□□□□□ -0.61
HDAC6-211ENST00000443563 TRIM11Q96F44 468 aa11.27□□□□□ -0.61
HDAC6-211ENST00000443563 PGAP3Q96FM1 320 aaPredicted RBP11.27□□□□□ -0.61
HDAC6-211ENST00000443563 SLC39A13Q96H72 371 aa11.27□□□□□ -0.61
HDAC6-211ENST00000443563 PNKPQ96T60 521 aa11.27□□□□□ -0.61
HDAC6-211ENST00000443563 C11orf70Q9BRQ4 267 aa11.27□□□□□ -0.61
HDAC6-211ENST00000443563 SYT11Q9BT88 431 aa11.27□□□□□ -0.61
HDAC6-211ENST00000443563 SELENOOQ9BVL4 669 aa11.27□□□□□ -0.61
HDAC6-211ENST00000443563 RBSNQ9H1K0 784 aa11.27□□□□□ -0.61
HDAC6-211ENST00000443563 LMAN1LQ9HAT1 526 aa11.27□□□□□ -0.61
HDAC6-211ENST00000443563 DDIT4Q9NX09 232 aa11.27□□□□□ -0.61
HDAC6-211ENST00000443563 DEC1Q9P2X7 70 aa11.27□□□□□ -0.61
HDAC6-211ENST00000443563 STOML2Q9UJZ1 356 aa11.27□□□□□ -0.61
HDAC6-211ENST00000443563 MTF2Q9Y483 593 aaPredicted RBP11.27□□□□□ -0.61
HDAC6-211ENST00000443563 TYW5A2RUC4 315 aaKnown RBP11.26□□□□□ -0.61
HDAC6-211ENST00000443563 NEDD8-MDP1E9PL57 170 aa11.26□□□□□ -0.61
HDAC6-211ENST00000443563 M0QYT0 321 aa11.26□□□□□ -0.61
HDAC6-211ENST00000443563 ACSL4O60488 711 aa11.26□□□□□ -0.61
HDAC6-211ENST00000443563 RTN2O75298 545 aa11.26□□□□□ -0.61
HDAC6-211ENST00000443563 APODP05090 189 aa11.26□□□□□ -0.61
HDAC6-211ENST00000443563 CHRNB1P11230 501 aa11.26□□□□□ -0.61
HDAC6-211ENST00000443563 KRT3P12035 628 aa11.26□□□□□ -0.61
HDAC6-211ENST00000443563 SKILP12757 684 aa11.26□□□□□ -0.61
HDAC6-211ENST00000443563 TYRP14679 529 aa11.26□□□□□ -0.61
HDAC6-211ENST00000443563 ABCB4P21439 1286 aa11.26□□□□□ -0.61
HDAC6-211ENST00000443563 HNRNPH3P31942 346 aaKnown RBP11.26□□□□□ -0.61
HDAC6-211ENST00000443563 SULT1E1P49888 294 aa11.26□□□□□ -0.61
HDAC6-211ENST00000443563 PTP4A2Q12974 167 aa11.26□□□□□ -0.61
HDAC6-211ENST00000443563 CCINQ13939 588 aa11.26□□□□□ -0.61
HDAC6-211ENST00000443563 PPP2R5DQ14738 602 aa11.26□□□□□ -0.61
HDAC6-211ENST00000443563 C2CD6Q53TS8 623 aa11.26□□□□□ -0.61
HDAC6-211ENST00000443563 BRMS1LQ5PSV4 323 aa11.26□□□□□ -0.61
HDAC6-211ENST00000443563 ACBD5Q5T8D3 534 aaPredicted RBP11.26□□□□□ -0.61
HDAC6-211ENST00000443563 DNAJC24Q6P3W2 148 aa11.26□□□□□ -0.61
HDAC6-211ENST00000443563 TPGS1Q6ZTW0 290 aa11.26□□□□□ -0.61
HDAC6-211ENST00000443563 MON1BQ7L1V2 547 aa11.26□□□□□ -0.61
HDAC6-211ENST00000443563 CNGA4Q8IV77 575 aa11.26□□□□□ -0.61
HDAC6-211ENST00000443563 ZNF687Q8N1G0 1237 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms