RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 APPL2Q8NEU8 664 aa7.56□□□□□ -1.2
R3HDM1-210ENST00000443537 THAP3Q8WTV1 239 aaPredicted RBP7.56□□□□□ -1.2
R3HDM1-210ENST00000443537 LINC01599Q8WXQ3 324 aa7.56□□□□□ -1.2
R3HDM1-210ENST00000443537 SEMA4DQ92854 862 aa7.56□□□□□ -1.2
R3HDM1-210ENST00000443537 ABHD8Q96I13 439 aa7.56□□□□□ -1.2
R3HDM1-210ENST00000443537 TNIP3Q96KP6 325 aa7.56□□□□□ -1.2
R3HDM1-210ENST00000443537 MRGPRX3Q96LB0 322 aa7.56□□□□□ -1.2
R3HDM1-210ENST00000443537 CCDC42Q96M95 316 aa7.56□□□□□ -1.2
R3HDM1-210ENST00000443537 ZMAT2Q96NC0 199 aaKnown RBP7.56□□□□□ -1.2
R3HDM1-210ENST00000443537 TSGA10Q9BZW7 698 aa7.56□□□□□ -1.2
R3HDM1-210ENST00000443537 NLRC4Q9NPP4 1024 aa7.56□□□□□ -1.2
R3HDM1-210ENST00000443537 KCND1Q9NSA2 647 aa7.56□□□□□ -1.2
R3HDM1-210ENST00000443537 ZKSCAN5Q9Y2L8 839 aa7.56□□□□□ -1.2
R3HDM1-210ENST00000443537 CEP83Q9Y592 693 aa7.56□□□□□ -1.2
R3HDM1-210ENST00000443537 DNAH12Q6ZR08 3092 aa7.56□□□□□ -1.2
R3HDM1-210ENST00000443537 PTPRDP23468 1912 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 PTPRSQ13332 1948 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 TRIM43BA6NCK2 446 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 PODXLO00592 558 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 SYN3O14994 580 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 EPHB6O15197 1021 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 MEFVO15553 781 aaPredicted RBP7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 AKR1B10O60218 316 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 HUS1O60921 280 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 ADAM23O75077 832 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 MED26O95402 600 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 LSM8O95777 96 aaKnown RBP7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 GSTM1P09488 218 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 CCDC175P0C221 793 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 FAM153BP0C7A2 387 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 ODC1P11926 461 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 GZMAP12544 262 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 VAV1P15498 845 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 CSF2RAP15509 400 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 TYMPP19971 482 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 MSNP26038 577 aaKnown RBP7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 PCSK1P29120 753 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 PPM1AP35813 382 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 KLK7P49862 253 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 SCNN1GP51170 649 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 SNX16P57768 344 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 LILRA4P59901 499 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 CCZ1BP86790 482 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 CCZ1P86791 482 aaPredicted RBP7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 MAPRE1Q15691 268 aaKnown RBP7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 NAB2Q15742 525 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 SLC18A3Q16572 532 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 C2orf27AQ580R0 203 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 GLRA4Q5JXX5 417 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 LMBRD2Q68DH5 695 aaPredicted RBP7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 ZNF662Q6ZS27 426 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 DEFB128Q7Z7B8 93 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 RTN4RL1Q86UN2 441 aaPredicted RBP7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 ZSCAN30Q86W11 494 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 GPR65Q8IYL9 337 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 RNF169Q8NCN4 708 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 MSANTD4Q8NCY6 345 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 FLCNQ8NFG4 579 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 BCL7CQ8WUZ0 217 aaPredicted RBP7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 TOP1MTQ969P6 601 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 TRIM43Q96BQ3 446 aaPredicted RBP7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 SCLYQ96I15 445 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 RNPC3Q96LT9 517 aaKnown RBP7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 COLEC11Q9BWP8 271 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 CDADC1Q9BWV3 514 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 ZNF518BQ9C0D4 1074 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 MIS12Q9H081 205 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 CISHQ9NSE2 258 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 PCMTD2Q9NV79 361 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 TBC1D13Q9NVG8 400 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 TUBGCP4Q9UGJ1 667 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 INTUQ9ULD6 942 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 BARX2Q9UMQ3 279 aaPredicted RBP7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 RWDD3Q9Y3V2 267 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 NUB1Q9Y5A7 615 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 KIAA1671Q9BY89 1806 aa7.55□□□□□ -1.2
R3HDM1-210ENST00000443537 SF3B1O75533 1304 aaKnown RBP eCLIP7.54□□□□□ -1.27e-6■■■■■ 28.7
R3HDM1-210ENST00000443537 EIF3CLB5ME19 914 aaKnown RBP7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 M0QZQ0 153 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 KIF2AO00139 706 aaPredicted RBP7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 PRODHO43272 600 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 DGKIO75912 1065 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 B3GAT3O94766 335 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 NDUFA10O95299 355 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 LCA5LO95447 670 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 FGBP02675 491 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 SNRPB2P08579 225 aaKnown RBP7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 KRT5P13647 590 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 LAG3P18627 525 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 RPL10P27635 214 aaKnown RBP7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 CD97P48960 835 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 ALDH7A1P49419 539 aaKnown RBP7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 ZNF132P52740 706 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 WDR5P61964 334 aaKnown RBP7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 CDR2Q01850 454 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 SMARCB1Q12824 385 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 ARHGAP44Q17R89 818 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 CLLU1OSQ5K130 101 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 WDR59Q6PJI9 974 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms