RNA–Protein interactions for RNA: ENST00000442721.1

TNXB-202, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-202ENST00000442721 USP3Q9Y6I4 520 aa12.51□□□□□ -0.41
TNXB-202ENST00000442721 NUMA1Q14980 2115 aa12.5□□□□□ -0.41
TNXB-202ENST00000442721 IKBKBO14920 756 aa12.5□□□□□ -0.41
TNXB-202ENST00000442721 CILPO75339 1184 aa12.5□□□□□ -0.41
TNXB-202ENST00000442721 CLSTN1O94985 981 aa12.5□□□□□ -0.41
TNXB-202ENST00000442721 CER1O95813 267 aa12.5□□□□□ -0.41
TNXB-202ENST00000442721 HLA-DRAP01903 254 aa12.5□□□□□ -0.41
TNXB-202ENST00000442721 C7P10643 843 aa12.5□□□□□ -0.41
TNXB-202ENST00000442721 OXTRP30559 389 aa12.5□□□□□ -0.41
TNXB-202ENST00000442721 CHKAP35790 457 aa12.5□□□□□ -0.41
TNXB-202ENST00000442721 AFMP43652 599 aa12.5□□□□□ -0.41
TNXB-202ENST00000442721 COPAP53621 1224 aa12.5□□□□□ -0.41
TNXB-202ENST00000442721 STK4Q13043 487 aa12.5□□□□□ -0.41
TNXB-202ENST00000442721 SOWAHCQ53LP3 525 aaPredicted RBP12.5□□□□□ -0.41
TNXB-202ENST00000442721 DCAF12L1Q5VU92 463 aa12.5□□□□□ -0.41
TNXB-202ENST00000442721 C19orf48Q6RUI8 117 aa12.5□□□□□ -0.41
TNXB-202ENST00000442721 PDZD3Q86UT5 571 aa12.5□□□□□ -0.41
TNXB-202ENST00000442721 TMPRSS6Q8IU80 811 aa12.5□□□□□ -0.41
TNXB-202ENST00000442721 JAKMIP2Q96AA8 810 aa12.5□□□□□ -0.41
TNXB-202ENST00000442721 CYFIP2Q96F07 1278 aa12.5□□□□□ -0.41
TNXB-202ENST00000442721 NT5C1AQ9BXI3 368 aa12.5□□□□□ -0.41
TNXB-202ENST00000442721 APOBEC3GQ9HC16 384 aaKnown RBP12.5□□□□□ -0.41
TNXB-202ENST00000442721 TOR4AQ9NXH8 423 aa12.5□□□□□ -0.41
TNXB-202ENST00000442721 CLIC5Q9NZA1 410 aa12.5□□□□□ -0.41
TNXB-202ENST00000442721 DKK4Q9UBT3 224 aa12.5□□□□□ -0.41
TNXB-202ENST00000442721 NAGPAQ9UK23 515 aa12.5□□□□□ -0.41
TNXB-202ENST00000442721 PCDHGB2Q9Y5G2 931 aa12.5□□□□□ -0.41
TNXB-202ENST00000442721 PDXKO00764 312 aa12.49□□□□□ -0.41
TNXB-202ENST00000442721 BCAT2O15382 392 aaPredicted RBP12.49□□□□□ -0.41
TNXB-202ENST00000442721 NR3C1P04150 777 aa12.49□□□□□ -0.41
TNXB-202ENST00000442721 TRIM21P19474 475 aaKnown RBP12.49□□□□□ -0.41
TNXB-202ENST00000442721 PRKCHP24723 683 aa12.49□□□□□ -0.41
TNXB-202ENST00000442721 PIK3CAP42336 1068 aa12.49□□□□□ -0.41
TNXB-202ENST00000442721 MATKP42679 507 aa12.49□□□□□ -0.41
TNXB-202ENST00000442721 COG7P83436 770 aa12.49□□□□□ -0.41
TNXB-202ENST00000442721 ZNF234Q14588 700 aa12.49□□□□□ -0.41
TNXB-202ENST00000442721 EIF4HQ15056 248 aaKnown RBP12.49□□□□□ -0.41
TNXB-202ENST00000442721 COL28A1Q2UY09 1125 aa12.49□□□□□ -0.41
TNXB-202ENST00000442721 RESP18Q5W5W9 173 aa12.49□□□□□ -0.41
TNXB-202ENST00000442721 IL27RAQ6UWB1 636 aa12.49□□□□□ -0.41
TNXB-202ENST00000442721 TMPRSS7Q7RTY8 843 aa12.49□□□□□ -0.41
TNXB-202ENST00000442721 ANKS1BQ7Z6G8 1248 aa12.49□□□□□ -0.41
TNXB-202ENST00000442721 TADA2BQ86TJ2 420 aa12.49□□□□□ -0.41
TNXB-202ENST00000442721 FAM217AQ8IXS0 508 aa12.49□□□□□ -0.41
TNXB-202ENST00000442721 GRAMD1CQ8IYS0 662 aa12.49□□□□□ -0.41
TNXB-202ENST00000442721 UCMAQ8WVF2 138 aa12.49□□□□□ -0.41
TNXB-202ENST00000442721 PRCCQ92733 491 aaPredicted RBP12.49□□□□□ -0.41
TNXB-202ENST00000442721 SIPA1Q96FS4 1042 aa12.49□□□□□ -0.41
TNXB-202ENST00000442721 CDK5RAP1Q96SZ6 601 aaKnown RBP12.49□□□□□ -0.41
TNXB-202ENST00000442721 NUP58Q9BVL2 599 aa12.49□□□□□ -0.41
TNXB-202ENST00000442721 DUSP16Q9BY84 665 aa12.49□□□□□ -0.41
TNXB-202ENST00000442721 DCLK3Q9C098 648 aa12.49□□□□□ -0.41
TNXB-202ENST00000442721 MIR1-1HGQ9H1L0 117 aa12.49□□□□□ -0.41
TNXB-202ENST00000442721 PCED1AQ9H1Q7 454 aa12.49□□□□□ -0.41
TNXB-202ENST00000442721 GAREM1Q9H706 876 aa12.49□□□□□ -0.41
TNXB-202ENST00000442721 CYP3A43Q9HB55 503 aa12.49□□□□□ -0.41
TNXB-202ENST00000442721 TM7SF3Q9NS93 570 aa12.49□□□□□ -0.41
TNXB-202ENST00000442721 ELOVL2Q9NXB9 296 aa12.49□□□□□ -0.41
TNXB-202ENST00000442721 AGO1Q9UL18 857 aaKnown RBP12.49□□□□□ -0.41
TNXB-202ENST00000442721 CLEC4EQ9ULY5 219 aa12.49□□□□□ -0.41
TNXB-202ENST00000442721 IGSF10Q6WRI0 2623 aa12.49□□□□□ -0.41
TNXB-202ENST00000442721 GOLGA4Q13439 2230 aaKnown RBP12.49□□□□□ -0.41
TNXB-202ENST00000442721 URB1O60287 2271 aaKnown RBP12.48□□□□□ -0.41
TNXB-202ENST00000442721 SYNCRIPO60506 623 aaKnown RBP12.48□□□□□ -0.41
TNXB-202ENST00000442721 RALAP11233 206 aa12.48□□□□□ -0.41
TNXB-202ENST00000442721 CORO1AP31146 461 aaKnown RBP12.48□□□□□ -0.41
TNXB-202ENST00000442721 E2F5Q15329 346 aa12.48□□□□□ -0.41
TNXB-202ENST00000442721 HLA-BQ31612 363 aa12.48□□□□□ -0.41
TNXB-202ENST00000442721 TMEM215Q68D42 235 aa12.48□□□□□ -0.41
TNXB-202ENST00000442721 CPXM2Q8N436 756 aa12.48□□□□□ -0.41
TNXB-202ENST00000442721 MDM1Q8TC05 714 aa12.48□□□□□ -0.41
TNXB-202ENST00000442721 SETD7Q8WTS6 366 aaKnown RBP12.48□□□□□ -0.41
TNXB-202ENST00000442721 SLC2A11Q9BYW1 496 aa12.48□□□□□ -0.41
TNXB-202ENST00000442721 EIF2B4Q9UI10 523 aaKnown RBP12.48□□□□□ -0.41
TNXB-202ENST00000442721 RAXQ9Y2V3 346 aa12.48□□□□□ -0.41
TNXB-202ENST00000442721 SLCO1B1Q9Y6L6 691 aa12.48□□□□□ -0.41
TNXB-202ENST00000442721 SETXQ7Z333 2677 aaKnown RBP12.48□□□□□ -0.41
TNXB-202ENST00000442721 MUC22E2RYF6 1773 aaPredicted RBP12.48□□□□□ -0.41
TNXB-202ENST00000442721 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.47□□□□□ -0.41
TNXB-202ENST00000442721 A0A1B0GVT2 93 aa12.47□□□□□ -0.41
TNXB-202ENST00000442721 MAPK13O15264 365 aa12.47□□□□□ -0.41
TNXB-202ENST00000442721 FLRT2O43155 660 aa12.47□□□□□ -0.41
TNXB-202ENST00000442721 SLFN14P0C7P3 912 aa12.47□□□□□ -0.41
TNXB-202ENST00000442721 EFEMP1Q12805 493 aa12.47□□□□□ -0.41
TNXB-202ENST00000442721 CAMK2GQ13555 558 aaPredicted RBP12.47□□□□□ -0.41
TNXB-202ENST00000442721 KMT5BQ4FZB7 885 aa12.47□□□□□ -0.41
TNXB-202ENST00000442721 PPP1R26Q5T8A7 1209 aaPredicted RBP12.47□□□□□ -0.41
TNXB-202ENST00000442721 SPRYD3Q8NCJ5 442 aa12.47□□□□□ -0.41
TNXB-202ENST00000442721 TAS1R2Q8TE23 839 aa12.47□□□□□ -0.41
TNXB-202ENST00000442721 SORCS1Q8WY21 1168 aa12.47□□□□□ -0.41
TNXB-202ENST00000442721 CDC6Q99741 560 aa12.47□□□□□ -0.41
TNXB-202ENST00000442721 NIF3L1Q9GZT8 377 aa12.47□□□□□ -0.41
TNXB-202ENST00000442721 OSGEPQ9NPF4 335 aa12.47□□□□□ -0.41
TNXB-202ENST00000442721 SCUBE2Q9NQ36 999 aa12.47□□□□□ -0.41
TNXB-202ENST00000442721 EXOC1Q9NV70 894 aa12.47□□□□□ -0.41
TNXB-202ENST00000442721 FAM13BQ9NYF5 915 aa12.47□□□□□ -0.41
TNXB-202ENST00000442721 RASAL2Q9UJF2 1139 aa12.47□□□□□ -0.41
TNXB-202ENST00000442721 PCDHA7Q9UN72 937 aa12.47□□□□□ -0.41
TNXB-202ENST00000442721 TRAF3IP3Q9Y228 551 aa12.47□□□□□ -0.41
TNXB-202ENST00000442721 TMEM131Q92545 1883 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms