RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 BLIDQ8IZY5 108 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 ZCCHC9Q8N567 271 aaKnown RBP6.81□□□□□ -1.32
HDAC6-210ENST00000441703 IL17RCQ8NAC3 791 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 TRIM58Q8NG06 486 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 TTC9Q92623 222 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 HAS1Q92839 578 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 SUSD3Q96L08 255 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 OSBPL9Q96SU4 736 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 PAIP2Q9BPZ3 127 aaKnown RBP6.81□□□□□ -1.32
HDAC6-210ENST00000441703 LPIN3Q9BQK8 851 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 SLC26A6Q9BXS9 759 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 CCDC113Q9H0I3 377 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 CRISPLD1Q9H336 500 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 CENPHQ9H3R5 247 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 NCOA5Q9HCD5 579 aaKnown RBP6.81□□□□□ -1.32
HDAC6-210ENST00000441703 ABHD10Q9NUJ1 306 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 CPSF2Q9P2I0 782 aaKnown RBP6.81□□□□□ -1.32
HDAC6-210ENST00000441703 RNF14Q9UBS8 474 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 FTSJ1Q9UET6 329 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 FNDC3AQ9Y2H6 1198 aaKnown RBP6.81□□□□□ -1.32
HDAC6-210ENST00000441703 CABIN1Q9Y6J0 2220 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 A0A1W2PQC6 194 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 MTMR11A4FU01 709 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 CFAP73A6NFT4 308 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 A6NHS1 94 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 ACKR2O00590 384 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 TERTO14746 1132 aaKnown RBP6.8□□□□□ -1.32
HDAC6-210ENST00000441703 USO1O60763 962 aaKnown RBP6.8□□□□□ -1.32
HDAC6-210ENST00000441703 CDKL5O76039 1030 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 SLITRK3O94933 977 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 VNN2O95498 520 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 ATP6V1G2O95670 118 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 ABL1P00519 1130 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 ATP1A1P05023 1023 aaKnown RBP6.8□□□□□ -1.32
HDAC6-210ENST00000441703 PAEPP09466 180 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 CDK4P11802 303 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 ANK1P16157 1881 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 NR1D1P20393 614 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 RPL9P32969 192 aaKnown RBP6.8□□□□□ -1.32
HDAC6-210ENST00000441703 GRK6P43250 576 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 SCTRP47872 440 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 TUFMP49411 452 aaKnown RBP6.8□□□□□ -1.32
HDAC6-210ENST00000441703 RPS6KA3P51812 740 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 CCNG1P51959 295 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 VAV2P52735 878 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 PCBP4P57723 403 aaKnown RBP6.8□□□□□ -1.32
HDAC6-210ENST00000441703 CDK17Q00537 523 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 MYO1EQ12965 1108 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 SPTAN1Q13813 2472 aaKnown RBP6.8□□□□□ -1.32
HDAC6-210ENST00000441703 ZNF268Q14587 947 aaPredicted RBP6.8□□□□□ -1.32
HDAC6-210ENST00000441703 NPY5RQ15761 445 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 HLA-BQ31612 363 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 EML3Q32P44 896 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 TBC1D25Q3MII6 688 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 ZC3H12AQ5D1E8 599 aaKnown RBP6.8□□□□□ -1.32
HDAC6-210ENST00000441703 CFAP58Q5T655 872 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 CAPRIN2Q6IMN6 1127 aaKnown RBP6.8□□□□□ -1.32
HDAC6-210ENST00000441703 TRMT11Q7Z4G4 463 aaKnown RBP6.8□□□□□ -1.32
HDAC6-210ENST00000441703 NEK8Q86SG6 692 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 TPH2Q8IWU9 490 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 IFT20Q8IY31 132 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 CCDC170Q8IYT3 715 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 TEX9Q8N6V9 391 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 ATAD1Q8NBU5 361 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 MCPH1Q8NEM0 835 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 RASSF8Q8NHQ8 419 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 GIPC2Q8TF65 315 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 ZFAND2BQ8WV99 257 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 CPLX3Q8WVH0 158 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 JAKMIP2Q96AA8 810 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 CYFIP2Q96F07 1278 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 ZNF419Q96HQ0 510 aaPredicted RBP6.8□□□□□ -1.32
HDAC6-210ENST00000441703 CALR3Q96L12 384 aaKnown RBP6.8□□□□□ -1.32
HDAC6-210ENST00000441703 ATP6V1G3Q96LB4 118 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 ZIM3Q96PE6 472 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 SPAG5Q96R06 1193 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 DNAJC7Q99615 494 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 NAP1L4Q99733 375 aaKnown RBP6.8□□□□□ -1.32
HDAC6-210ENST00000441703 PLCD4Q9BRC7 762 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 TSGA10Q9BZW7 698 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 NUCKS1Q9H1E3 243 aaKnown RBP6.8□□□□□ -1.32
HDAC6-210ENST00000441703 IL21Q9HBE4 155 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 TRPC7Q9HCX4 862 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 GDF3Q9NR23 364 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 GUCA1BQ9UMX6 200 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 BTBD3Q9Y2F9 522 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.8□□□□□ -1.32
HDAC6-210ENST00000441703 C15orf41Q9Y2V0 281 aa6.8□□□□□ -1.32
HDAC6-210ENST00000441703 REXO2Q9Y3B8 237 aaKnown RBP6.8□□□□□ -1.32
HDAC6-210ENST00000441703 ANTXRLA6NF34 631 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 PPP1R3GB7ZBB8 358 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 PDE2AO00408 941 aaPredicted RBP6.79□□□□□ -1.32
HDAC6-210ENST00000441703 ABLIM1O14639 778 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 CPLX1O14810 134 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 ACTN4O43707 911 aaKnown RBP6.79□□□□□ -1.32
HDAC6-210ENST00000441703 RFPL3O75679 317 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 SMNDC1O75940 238 aaKnown RBP eCLIP6.79□□□□□ -1.32
HDAC6-210ENST00000441703 OAZ2O95190 189 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 KAT7O95251 611 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 AFPP02771 609 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms