RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 PCDH19Q8TAB3 1148 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 PPP1R2P1Q96PQ5 205 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 QKIQ96PU8 341 aaKnown RBP eCLIP6.24□□□□□ -1.41
VPS50-205ENST00000441602 PKMYT1Q99640 499 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 TXLNGYQ9BZA5 131 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 CDC42EP4Q9H3Q1 356 aaKnown RBP6.24□□□□□ -1.41
VPS50-205ENST00000441602 CATSPERBQ9H7T0 1116 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 VPS37BQ9H9H4 285 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 FBXW11Q9UKB1 542 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 NAALADL1Q9UQQ1 740 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 HHLA1C9JL84 531 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 AGPSO00116 658 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 PSMD3O43242 534 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 BEST1O76090 585 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 NR1D1P20393 614 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 AMPD1P23109 780 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 IVDP26440 423 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 CCR1P32246 355 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 TUFMP49411 452 aaKnown RBP6.24□□□□□ -1.41
VPS50-205ENST00000441602 CXCR3P49682 368 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 ZNF844Q08AG5 666 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 TERF2Q15554 542 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 UAP1Q16222 522 aaPredicted RBP6.24□□□□□ -1.41
VPS50-205ENST00000441602 ITPRIPL1Q6GPH6 555 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 NECAB2Q7Z6G3 386 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 LZTR1Q8N653 840 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 CCDC185Q8N715 623 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 ATP6V0D2Q8N8Y2 350 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 PDZD8Q8NEN9 1154 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 DQX1Q8TE96 717 aaKnown RBP6.24□□□□□ -1.41
VPS50-205ENST00000441602 FBXO32Q969P5 355 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 PGM2Q96G03 612 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 TMEM169Q96HH4 297 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 SCLYQ96I15 445 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 SERPINB12Q96P63 405 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 KCNK16Q96T55 309 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 OSBPL2Q9H1P3 480 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 TLR8Q9NR97 1041 aaKnown RBP6.24□□□□□ -1.41
VPS50-205ENST00000441602 ADAM21Q9UKJ8 722 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 SCML2Q9UQR0 700 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 USP3Q9Y6I4 520 aa6.24□□□□□ -1.41
VPS50-205ENST00000441602 FGF10O15520 208 aaPredicted RBP6.23□□□□□ -1.41
VPS50-205ENST00000441602 GALTP07902 379 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 PECAM1P16284 738 aaPredicted RBP6.23□□□□□ -1.41
VPS50-205ENST00000441602 GBP2P32456 591 aaPredicted RBP6.23□□□□□ -1.41
VPS50-205ENST00000441602 GPR17Q13304 367 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 SLC29A2Q14542 456 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 VEPH1Q14D04 833 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 CA9Q16790 459 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 KLHL38Q2WGJ6 581 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 MGAT5BQ3V5L5 792 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 RNASEH2BQ5TBB1 312 aaKnown RBP6.23□□□□□ -1.41
VPS50-205ENST00000441602 LRRC31Q6UY01 552 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 RFX8Q6ZV50 586 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 PALM2Q8IXS6 379 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 PQLC3Q8N755 202 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 PYROXD1Q8WU10 500 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 ARMC5Q96C12 935 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 RTP4Q96DX8 246 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 SMOC2Q9H3U7 446 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 XAB2Q9HCS7 855 aaKnown RBP6.23□□□□□ -1.41
VPS50-205ENST00000441602 HAUS2Q9NVX0 235 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 CWC15Q9P013 229 aaKnown RBP6.23□□□□□ -1.41
VPS50-205ENST00000441602 DNAJB4Q9UDY4 337 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 PRKAG2Q9UGJ0 569 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 XPO7Q9UIA9 1087 aaKnown RBP6.23□□□□□ -1.41
VPS50-205ENST00000441602 SSX2IPQ9Y2D8 614 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 BACE2Q9Y5Z0 518 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 TDRD15B5MCY1 1934 aaKnown RBP6.23□□□□□ -1.41
VPS50-205ENST00000441602 AP3B1O00203 1094 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 IRAK2O43187 625 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 OPHN1O60890 802 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 GSTA2P09210 222 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 RAG1P15918 1043 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 ELF1P32519 619 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 PPM1AP35813 382 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 CDK16Q00536 496 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 PDIA2Q13087 525 aaKnown RBP6.23□□□□□ -1.41
VPS50-205ENST00000441602 PRPSAP1Q14558 356 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 PPP2R5DQ14738 602 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 PAFAH1B3Q15102 231 aaKnown RBP6.23□□□□□ -1.41
VPS50-205ENST00000441602 NPNTQ6UXI9 565 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 KDM7AQ6ZMT4 941 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 DENND5BQ6ZUT9 1274 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 HFE2Q6ZVN8 426 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 CYP4V2Q6ZWL3 525 aaPredicted RBP6.23□□□□□ -1.41
VPS50-205ENST00000441602 ANKS1BQ7Z6G8 1248 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 TAC4Q86UU9 113 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 UNC45BQ8IWX7 931 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 CCNYQ8ND76 341 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 EDEM1Q92611 657 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 TBC1D31Q96DN5 1066 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 SPATA17Q96L03 361 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 HAPLN3Q96S86 360 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 VAT1Q99536 393 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 SEPT5Q99719 369 aaPredicted RBP6.23□□□□□ -1.41
VPS50-205ENST00000441602 CAPS2Q9BXY5 557 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 SEMA4AQ9H3S1 761 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 ARHGEF4Q9NR80 690 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 RAB6BQ9NRW1 208 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms