RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 UBAP2Q5T6F2 1119 aaKnown RBP13.64□□□□□ -0.23
CPSF4-206ENST00000441580 VSTM1Q6UX27 236 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 RFX8Q6ZV50 586 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 HFE2Q6ZVN8 426 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 RTN4RL1Q86UN2 441 aaPredicted RBP13.64□□□□□ -0.23
CPSF4-206ENST00000441580 NPAS4Q8IUM7 802 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 VPS52Q8N1B4 723 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 ARHGAP18Q8N392 663 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 UHMK1Q8TAS1 419 aaKnown RBP13.64□□□□□ -0.23
CPSF4-206ENST00000441580 TFB1MQ8WVM0 346 aaKnown RBP13.64□□□□□ -0.23
CPSF4-206ENST00000441580 KCNK16Q96T55 309 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 EPAS1Q99814 870 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 TMEM175Q9BSA9 504 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 OXCT2Q9BYC2 517 aaPredicted RBP13.64□□□□□ -0.23
CPSF4-206ENST00000441580 UNC93B1Q9H1C4 597 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 USP29Q9HBJ7 922 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 WDR6Q9NNW5 1121 aaKnown RBP13.64□□□□□ -0.23
CPSF4-206ENST00000441580 TMEM30AQ9NV96 361 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 CALCOCO1Q9P1Z2 691 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 NAALADL1Q9UQQ1 740 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 PCDHB7Q9Y5E2 793 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 CLUHO75153 1309 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 SYNJ2BP-COX16A0A087WUM0 186 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 C5orf60A6NFR6 353 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 E7EVH7 732 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 MFSD11O43934 449 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 NBNO60934 754 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 GCATO75600 419 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 DDHD2O94830 711 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 FYNP06241 537 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 RBL1P28749 1068 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 ADRA1BP35368 520 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 FDFT1P37268 417 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 MAGEA11P43364 429 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 SLCO1A2P46721 670 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 CXCR3P49682 368 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 SLC5A3P53794 718 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 PITX1P78337 314 aaPredicted RBP13.63□□□□□ -0.23
CPSF4-206ENST00000441580 GBE1Q04446 702 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 SEMA3BQ13214 749 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 PRKD1Q15139 912 aaPredicted RBP13.63□□□□□ -0.23
CPSF4-206ENST00000441580 ZSCAN26Q16670 478 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 CCDC38Q502W7 563 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 BRMS1LQ5PSV4 323 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 SYPL2Q5VXT5 272 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 ANKRD22Q5VYY1 191 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 ARHGEF18Q6ZSZ5 1173 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 ZNF280BQ86YH2 543 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 LRRC43Q8N309 656 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 SH3TC2Q8TF17 1288 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 PYROXD1Q8WU10 500 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 NDRG1Q92597 394 aaKnown RBP13.63□□□□□ -0.23
CPSF4-206ENST00000441580 CENPTQ96BT3 561 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 PWWP2AQ96N64 755 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 SELENOSQ9BQE4 189 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 COLEC11Q9BWP8 271 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 RHOBTB2Q9BYZ6 727 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 BRD8Q9H0E9 1235 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 SMOC2Q9H3U7 446 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 VPS37BQ9H9H4 285 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 RAB6BQ9NRW1 208 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 ETNK2Q9NVF9 386 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 TMLHEQ9NVH6 421 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 DTLQ9NZJ0 730 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 COX16Q9P0S2 106 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 SENP1Q9P0U3 644 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 SLC24A2Q9UI40 661 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 FBXW11Q9UKB1 542 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 ADAM28Q9UKQ2 775 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 OGDHLQ9ULD0 1010 aa13.63□□□□□ -0.23
CPSF4-206ENST00000441580 PRG3Q9Y2Y8 225 aaPredicted RBP13.63□□□□□ -0.23
CPSF4-206ENST00000441580 A0A0A0MRY4 1105 aa13.62□□□□□ -0.23
CPSF4-206ENST00000441580 DCLK1O15075 740 aa13.62□□□□□ -0.23
CPSF4-206ENST00000441580 NCAM2O15394 837 aa13.62□□□□□ -0.23
CPSF4-206ENST00000441580 MTSS1O43312 755 aa13.62□□□□□ -0.23
CPSF4-206ENST00000441580 B4GALT3O60512 393 aa13.62□□□□□ -0.23
CPSF4-206ENST00000441580 OPHN1O60890 802 aa13.62□□□□□ -0.23
CPSF4-206ENST00000441580 TADA2AO75478 443 aa13.62□□□□□ -0.23
CPSF4-206ENST00000441580 DGKIO75912 1065 aa13.62□□□□□ -0.23
CPSF4-206ENST00000441580 IGLV3-25P01717 112 aa13.62□□□□□ -0.23
CPSF4-206ENST00000441580 GLUD2P49448 558 aa13.62□□□□□ -0.23
CPSF4-206ENST00000441580 GUCY1A3Q02108 690 aa13.62□□□□□ -0.23
CPSF4-206ENST00000441580 SMARCB1Q12824 385 aa13.62□□□□□ -0.23
CPSF4-206ENST00000441580 SLC39A12Q504Y0 691 aa13.62□□□□□ -0.23
CPSF4-206ENST00000441580 KCNT2Q6UVM3 1135 aa13.62□□□□□ -0.23
CPSF4-206ENST00000441580 TAC4Q86UU9 113 aa13.62□□□□□ -0.23
CPSF4-206ENST00000441580 MCUQ8NE86 351 aa13.62□□□□□ -0.23
CPSF4-206ENST00000441580 DBF4BQ8NFT6 615 aa13.62□□□□□ -0.23
CPSF4-206ENST00000441580 DQX1Q8TE96 717 aaKnown RBP13.62□□□□□ -0.23
CPSF4-206ENST00000441580 HTR3CQ8WXA8 447 aa13.62□□□□□ -0.23
CPSF4-206ENST00000441580 LRRC39Q96DD0 335 aa13.62□□□□□ -0.23
CPSF4-206ENST00000441580 C8orf48Q96LL4 319 aa13.62□□□□□ -0.23
CPSF4-206ENST00000441580 SPATA13Q96N96 652 aa13.62□□□□□ -0.23
CPSF4-206ENST00000441580 TMEM209Q96SK2 561 aa13.62□□□□□ -0.23
CPSF4-206ENST00000441580 EPN3Q9H201 632 aa13.62□□□□□ -0.23
CPSF4-206ENST00000441580 C10orf88Q9H8K7 445 aa13.62□□□□□ -0.23
CPSF4-206ENST00000441580 XAB2Q9HCS7 855 aaKnown RBP13.62□□□□□ -0.23
CPSF4-206ENST00000441580 EIF2B3Q9NR50 452 aaKnown RBP13.62□□□□□ -0.23
CPSF4-206ENST00000441580 ABCC13Q9NSE7 274 aa13.62□□□□□ -0.23
CPSF4-206ENST00000441580 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms