RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 CAPN8A6NHC0 703 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 EXTL3O43909 919 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 PDE5AO76074 875 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 TNFAIP8O95379 198 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 UBA1P22314 1058 aaKnown RBP12.29□□□□□ -0.44
LTBR-203ENST00000441074 MRPS5P82675 430 aaKnown RBP12.29□□□□□ -0.44
LTBR-203ENST00000441074 OTUD4Q01804 1114 aaKnown RBP12.29□□□□□ -0.44
LTBR-203ENST00000441074 ZNF252P-AS1Q0IIN9 211 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 CBX3Q13185 183 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 STX3Q13277 289 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 MTA1Q13330 715 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 TMED1Q13445 227 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 TUBB3Q13509 450 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 RABGAP1LQ5R372 815 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 TRIM50Q86XT4 487 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 FBXO16Q8IX29 292 aaPredicted RBP12.29□□□□□ -0.44
LTBR-203ENST00000441074 RNF168Q8IYW5 571 aaPredicted RBP12.29□□□□□ -0.44
LTBR-203ENST00000441074 ACTL9Q8TC94 416 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 BRI3BPQ8WY22 251 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 BSNDQ8WZ55 320 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 COPS5Q92905 334 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 DCUN1D1Q96GG9 259 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 CEP170P1Q96L14 293 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 CAPNS2Q96L46 248 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 ZIC5Q96T25 663 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 PTPN18Q99952 460 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 GRIP2Q9C0E4 1043 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 C20orf27Q9GZN8 174 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 SENP6Q9GZR1 1112 aaPredicted RBP12.29□□□□□ -0.44
LTBR-203ENST00000441074 TMEM165Q9HC07 324 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 PDGFCQ9NRA1 345 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 TBCCD1Q9NVR7 557 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 THAP1Q9NVV9 213 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 C6orf203Q9P0P8 240 aaPredicted RBP12.29□□□□□ -0.44
LTBR-203ENST00000441074 ZNF180Q9UJW8 692 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 TEX264Q9Y6I9 313 aa12.29□□□□□ -0.44
LTBR-203ENST00000441074 CCDC195A0A1B0GUA6 201 aa12.28□□□□□ -0.44
LTBR-203ENST00000441074 FAM155AB1AL88 458 aaPredicted RBP12.28□□□□□ -0.44
LTBR-203ENST00000441074 KBTBD13C9JR72 458 aa12.28□□□□□ -0.44
LTBR-203ENST00000441074 F8VP50 259 aa12.28□□□□□ -0.44
LTBR-203ENST00000441074 TRMUO75648 421 aaKnown RBP12.28□□□□□ -0.44
LTBR-203ENST00000441074 HLA-DRAP01903 254 aa12.28□□□□□ -0.44
LTBR-203ENST00000441074 BPGMP07738 259 aa12.28□□□□□ -0.44
LTBR-203ENST00000441074 SLC10A3P09131 477 aa12.28□□□□□ -0.44
LTBR-203ENST00000441074 TBXAS1P24557 533 aaPredicted RBP12.28□□□□□ -0.44
LTBR-203ENST00000441074 YWHAGP61981 247 aaKnown RBP eCLIP12.28□□□□□ -0.44
LTBR-203ENST00000441074 MTM1Q13496 603 aa12.28□□□□□ -0.44
LTBR-203ENST00000441074 USP41Q3LFD5 358 aa12.28□□□□□ -0.44
LTBR-203ENST00000441074 LGSNQ5TDP6 509 aa12.28□□□□□ -0.44
LTBR-203ENST00000441074 TXNRD3NBQ6F5E7 133 aa12.28□□□□□ -0.44
LTBR-203ENST00000441074 XRRA1Q6P2D8 792 aa12.28□□□□□ -0.44
LTBR-203ENST00000441074 ARCQ7LC44 396 aa12.28□□□□□ -0.44
LTBR-203ENST00000441074 FAM213AQ9BRX8 229 aa12.28□□□□□ -0.44
LTBR-203ENST00000441074 SEPT9Q9UHD8 586 aaPredicted RBP12.28□□□□□ -0.44
LTBR-203ENST00000441074 CCL15-CCL14A0A0B4J2E2 113 aa12.28□□□□□ -0.44
LTBR-203ENST00000441074 AOC2O75106 756 aa12.28□□□□□ -0.44
LTBR-203ENST00000441074 SORBS2O94875 1100 aaKnown RBP12.28□□□□□ -0.44
LTBR-203ENST00000441074 STBD1O95210 358 aa12.28□□□□□ -0.44
LTBR-203ENST00000441074 PROCP04070 461 aa12.28□□□□□ -0.44
LTBR-203ENST00000441074 ACO1P21399 889 aaKnown RBP12.28□□□□□ -0.44
LTBR-203ENST00000441074 SLC5A2P31639 672 aa12.28□□□□□ -0.44
LTBR-203ENST00000441074 MAGEA10P43363 369 aaPredicted RBP12.28□□□□□ -0.44
LTBR-203ENST00000441074 PRKCEQ02156 737 aa12.28□□□□□ -0.44
LTBR-203ENST00000441074 CREB5Q02930 508 aa12.28□□□□□ -0.44
LTBR-203ENST00000441074 KRT81Q14533 505 aa12.28□□□□□ -0.44
LTBR-203ENST00000441074 ADRM1Q16186 407 aa12.28□□□□□ -0.44
LTBR-203ENST00000441074 CCL15Q16663 113 aa12.28□□□□□ -0.44
LTBR-203ENST00000441074 ABHD15Q6UXT9 468 aa12.28□□□□□ -0.44
LTBR-203ENST00000441074 FASTKD5Q7L8L6 764 aaKnown RBP12.28□□□□□ -0.44
LTBR-203ENST00000441074 WDR75Q8IWA0 830 aaKnown RBP12.28□□□□□ -0.44
LTBR-203ENST00000441074 FBXW8Q8N3Y1 598 aa12.28□□□□□ -0.44
LTBR-203ENST00000441074 ATP6V0A1Q93050 837 aa12.28□□□□□ -0.44
LTBR-203ENST00000441074 C10orf88Q9H8K7 445 aa12.28□□□□□ -0.44
LTBR-203ENST00000441074 PADI4Q9UM07 663 aa12.28□□□□□ -0.44
LTBR-203ENST00000441074 PSMD13Q9UNM6 376 aa12.28□□□□□ -0.44
LTBR-203ENST00000441074 C3orf70A6NLC5 250 aaPredicted RBP12.27□□□□□ -0.44
LTBR-203ENST00000441074 CYB561D2O14569 222 aa12.27□□□□□ -0.44
LTBR-203ENST00000441074 RFPL1O75677 317 aa12.27□□□□□ -0.44
LTBR-203ENST00000441074 DGAT1O75907 488 aa12.27□□□□□ -0.44
LTBR-203ENST00000441074 C1QAP02745 245 aa12.27□□□□□ -0.44
LTBR-203ENST00000441074 MMP8P22894 467 aa12.27□□□□□ -0.44
LTBR-203ENST00000441074 PCSK6P29122 969 aa12.27□□□□□ -0.44
LTBR-203ENST00000441074 GNA15P30679 374 aa12.27□□□□□ -0.44
LTBR-203ENST00000441074 L1CAMP32004 1257 aa12.27□□□□□ -0.44
LTBR-203ENST00000441074 VEGFBP49765 207 aa12.27□□□□□ -0.44
LTBR-203ENST00000441074 NR1H2P55055 460 aa12.27□□□□□ -0.44
LTBR-203ENST00000441074 PPIDQ08752 370 aaKnown RBP12.27□□□□□ -0.44
LTBR-203ENST00000441074 CBLBQ13191 982 aa12.27□□□□□ -0.44
LTBR-203ENST00000441074 CUL2Q13617 745 aa12.27□□□□□ -0.44
LTBR-203ENST00000441074 APOFQ13790 326 aa12.27□□□□□ -0.44
LTBR-203ENST00000441074 PIGHQ14442 188 aaPredicted RBP12.27□□□□□ -0.44
LTBR-203ENST00000441074 HSDL1Q3SXM5 330 aa12.27□□□□□ -0.44
LTBR-203ENST00000441074 MTERF2Q49AM1 385 aa12.27□□□□□ -0.44
LTBR-203ENST00000441074 TSHZ1Q6ZSZ6 1077 aa12.27□□□□□ -0.44
LTBR-203ENST00000441074 DENND5BQ6ZUT9 1274 aa12.27□□□□□ -0.44
LTBR-203ENST00000441074 ZNF410Q86VK4 478 aa12.27□□□□□ -0.44
LTBR-203ENST00000441074 PQLC1Q8N2U9 271 aa12.27□□□□□ -0.44
LTBR-203ENST00000441074 POU5F2Q8N7G0 328 aa12.27□□□□□ -0.44
LTBR-203ENST00000441074 DNERQ8NFT8 737 aa12.27□□□□□ -0.44
LTBR-203ENST00000441074 CEP70Q8NHQ1 597 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms