RNA–Protein interactions for RNA: ENST00000440289.6

PTPRJ-202, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 1 (best) BASIC

Gene PTPRJ, Length 3,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-202ENST00000440289 A0A087WZ62 844 aa18.86■□□□□ 0.61
PTPRJ-202ENST00000440289 CYP2F1P24903 491 aa18.86■□□□□ 0.61
PTPRJ-202ENST00000440289 GSTT1P30711 240 aa18.86■□□□□ 0.61
PTPRJ-202ENST00000440289 GMPSP49915 693 aaPredicted RBP18.86■□□□□ 0.61
PTPRJ-202ENST00000440289 KCNJ11Q14654 390 aa18.86■□□□□ 0.61
PTPRJ-202ENST00000440289 FAM160B1Q5W0V3 765 aa18.86■□□□□ 0.61
PTPRJ-202ENST00000440289 PMF1Q6P1K2 205 aa18.86■□□□□ 0.61
PTPRJ-202ENST00000440289 FDXACB1Q9BRP7 624 aaPredicted RBP18.86■□□□□ 0.61
PTPRJ-202ENST00000440289 ZNF518BQ9C0D4 1074 aa18.86■□□□□ 0.61
PTPRJ-202ENST00000440289 CLIC5Q9NZA1 410 aa18.86■□□□□ 0.61
PTPRJ-202ENST00000440289 CPSF3Q9UKF6 684 aaKnown RBP18.86■□□□□ 0.61
PTPRJ-202ENST00000440289 RNASEH1O60930 286 aaKnown RBP18.86■□□□□ 0.61
PTPRJ-202ENST00000440289 ARIH2O95376 493 aa18.86■□□□□ 0.61
PTPRJ-202ENST00000440289 IQCF3P0C7M6 154 aa18.86■□□□□ 0.61
PTPRJ-202ENST00000440289 CHRM1P11229 460 aaPredicted RBP18.86■□□□□ 0.61
PTPRJ-202ENST00000440289 SLC1A6P48664 564 aa18.86■□□□□ 0.61
PTPRJ-202ENST00000440289 RTP1P59025 263 aa18.86■□□□□ 0.61
PTPRJ-202ENST00000440289 DLG2Q15700 870 aa18.86■□□□□ 0.61
PTPRJ-202ENST00000440289 GALNT4Q8N4A0 578 aa18.86■□□□□ 0.61
PTPRJ-202ENST00000440289 ECSITQ9BQ95 431 aa18.86■□□□□ 0.61
PTPRJ-202ENST00000440289 FARP2O94887 1054 aaPredicted RBP18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 AQP4P55087 323 aa18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 MPZL3Q6UWV2 235 aa18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 KDELC2Q7Z4H8 507 aa18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 SEPT1Q8WYJ6 367 aa18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 CNPY3Q9BT09 278 aa18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 CXCL16Q9H2A7 254 aa18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 STYXL1Q9Y6J8 313 aa18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 SLC4A7Q9Y6M7 1214 aa18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 OR6B1O95007 311 aa18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 CCR10P46092 362 aa18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 SLC18A1P54219 525 aa18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 NME3Q13232 169 aa18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 CCDC142Q17RM4 750 aa18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 MMEL1Q495T6 779 aa18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 PPP1R26Q5T8A7 1209 aaPredicted RBP18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 OR52E8Q6IFG1 317 aa18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 ADGRF2Q8IZF7 708 aa18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 PHTF2Q8N3S3 785 aa18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 DNAAF3Q8N9W5 541 aa18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 TTC16Q8NEE8 873 aa18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 CMASQ8NFW8 434 aaPredicted RBP18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 ZNF398Q8TD17 642 aa18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 FAM136AQ96C01 138 aa18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 KIF12Q96FN5 646 aa18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 DHRS4Q9BTZ2 278 aa18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 KCNK4Q9NYG8 393 aa18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 E7ESA3 106 aa18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 HNRNPCL1O60812 293 aaKnown RBP18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 HMGB2P26583 209 aaKnown RBP18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 TREML2Q5T2D2 321 aa18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 TP53INP2Q8IXH6 220 aa18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 USP29Q9HBJ7 922 aa18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 PGAP2Q9UHJ9 254 aa18.85■□□□□ 0.61
PTPRJ-202ENST00000440289 BPGMP07738 259 aa18.84■□□□□ 0.61
PTPRJ-202ENST00000440289 RAG1P15918 1043 aa18.84■□□□□ 0.61
PTPRJ-202ENST00000440289 NELFEP18615 380 aaKnown RBP18.84■□□□□ 0.61
PTPRJ-202ENST00000440289 GPD2P43304 727 aa18.84■□□□□ 0.61
PTPRJ-202ENST00000440289 PKNOX1P55347 436 aa18.84■□□□□ 0.61
PTPRJ-202ENST00000440289 SLC18A2Q05940 514 aa18.84■□□□□ 0.61
PTPRJ-202ENST00000440289 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.84■□□□□ 0.61
PTPRJ-202ENST00000440289 SPATA6LQ8N4H0 392 aa18.84■□□□□ 0.61
PTPRJ-202ENST00000440289 TMEM174Q8WUU8 243 aa18.84■□□□□ 0.61
PTPRJ-202ENST00000440289 NLRP7Q8WX94 980 aa18.84■□□□□ 0.61
PTPRJ-202ENST00000440289 PCDH18Q9HCL0 1135 aa18.84■□□□□ 0.61
PTPRJ-202ENST00000440289 SOX13Q9UN79 622 aa18.84■□□□□ 0.61
PTPRJ-202ENST00000440289 SPDYE16A6NNV3 312 aaPredicted RBP18.84■□□□□ 0.61
PTPRJ-202ENST00000440289 LIN7AO14910 233 aaPredicted RBP18.84■□□□□ 0.61
PTPRJ-202ENST00000440289 TM7SF2O76062 418 aa18.84■□□□□ 0.61
PTPRJ-202ENST00000440289 HSPA4LO95757 839 aa18.84■□□□□ 0.61
PTPRJ-202ENST00000440289 AVPR1AP37288 418 aa18.84■□□□□ 0.61
PTPRJ-202ENST00000440289 ZNF143P52747 638 aaPredicted RBP18.84■□□□□ 0.61
PTPRJ-202ENST00000440289 COPAP53621 1224 aa18.84■□□□□ 0.61
PTPRJ-202ENST00000440289 CCDC14Q49A88 953 aa18.84■□□□□ 0.61
PTPRJ-202ENST00000440289 SFT2D3Q587I9 215 aa18.84■□□□□ 0.61
PTPRJ-202ENST00000440289 EFHC1Q5JVL4 640 aa18.84■□□□□ 0.61
PTPRJ-202ENST00000440289 PQLC3Q8N755 202 aa18.84■□□□□ 0.61
PTPRJ-202ENST00000440289 WDR55Q9H6Y2 383 aaPredicted RBP18.84■□□□□ 0.61
PTPRJ-202ENST00000440289 TLE6Q9H808 572 aa18.84■□□□□ 0.61
PTPRJ-202ENST00000440289 PPCSQ9HAB8 311 aa18.84■□□□□ 0.61
PTPRJ-202ENST00000440289 ZNF212Q9UDV6 495 aa18.84■□□□□ 0.61
PTPRJ-202ENST00000440289 APPL1Q9UKG1 709 aa18.84■□□□□ 0.61
PTPRJ-202ENST00000440289 PPEF2O14830 753 aa18.83■□□□□ 0.61
PTPRJ-202ENST00000440289 GOT1P17174 413 aa18.83■□□□□ 0.61
PTPRJ-202ENST00000440289 TPH1P17752 444 aa18.83■□□□□ 0.61
PTPRJ-202ENST00000440289 DLG1Q12959 904 aa18.83■□□□□ 0.61
PTPRJ-202ENST00000440289 GSDMBQ8TAX9 411 aa18.83■□□□□ 0.61
PTPRJ-202ENST00000440289 GDPD5Q8WTR4 605 aa18.83■□□□□ 0.61
PTPRJ-202ENST00000440289 ATP2A3Q93084 1043 aa18.83■□□□□ 0.61
PTPRJ-202ENST00000440289 AS3MTQ9HBK9 375 aa18.83■□□□□ 0.61
PTPRJ-202ENST00000440289 CNTN6Q9UQ52 1028 aa18.83■□□□□ 0.61
PTPRJ-202ENST00000440289 AMHP03971 560 aa18.83■□□□□ 0.6
PTPRJ-202ENST00000440289 CYP3A5P20815 502 aa18.83■□□□□ 0.6
PTPRJ-202ENST00000440289 EFNA5P52803 228 aa18.83■□□□□ 0.6
PTPRJ-202ENST00000440289 SLC10A2Q12908 348 aaPredicted RBP18.83■□□□□ 0.6
PTPRJ-202ENST00000440289 PPP1R2P3Q6NXS1 205 aa18.83■□□□□ 0.6
PTPRJ-202ENST00000440289 CHSY1Q86X52 802 aa18.83■□□□□ 0.6
PTPRJ-202ENST00000440289 DNAJC1Q96KC8 554 aaKnown RBP18.83■□□□□ 0.6
PTPRJ-202ENST00000440289 FAM49AQ9H0Q0 323 aaPredicted RBP18.83■□□□□ 0.6
PTPRJ-202ENST00000440289 CAPN8A6NHC0 703 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms