RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 SYNE3Q6ZMZ3 975 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 CCDC73Q6ZRK6 1079 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 RBM43Q6ZSC3 357 aaKnown RBP3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 MFSD6Q6ZSS7 791 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 MICALCLQ6ZW33 695 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 CYB5R4Q7L1T6 521 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 TBC1D10CQ8IV04 446 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 ANKRD18AQ8IVF6 992 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 TMTC2Q8N394 836 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 PRR18Q8N4B5 295 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 ENAHQ8N8S7 591 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 FAM156AQ8NDB6 213 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 PPP1R35Q8TAP8 253 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 IFI44Q8TCB0 444 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 PPM1EQ8WY54 764 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 SCAMP4Q969E2 229 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 NACC2Q96BF6 587 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 CLPTM1LQ96KA5 538 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 SLC2A13Q96QE2 648 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 USP28Q96RU2 1077 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 ALG8Q9BVK2 526 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 KRT23Q9C075 422 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 NYXQ9GZU5 481 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 TMEM60Q9H2L4 133 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 ARMT1Q9H993 441 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 NLRC4Q9NPP4 1024 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 PLCB1Q9NQ66 1216 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 RAI14Q9P0K7 980 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 FOXJ2Q9P0K8 574 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 HSFX1Q9UBD0 423 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 ORC3Q9UBD5 711 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 NARFQ9UHQ1 456 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 ENTPD2Q9Y5L3 495 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 SLC4A4Q9Y6R1 1079 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 ITGB4P16144 1822 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 SLIT2O94813 1529 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 ABHD14A-ACY1A0A1B0GW23 586 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 ERICH2A1L162 156 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 FAM227AF5H4B4 570 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 SNAP23O00161 211 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 SPTLC2O15270 562 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 SLC16A6O15403 523 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 ZBTB43O43298 467 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 PRKAB2O43741 272 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 KINO60870 393 aaKnown RBP3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 URI1O94763 535 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 YEATS4O95619 227 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 MYL3P08590 195 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 WT1P19544 449 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 PLA2G5P39877 138 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 GYG1P46976 350 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 ME1P48163 572 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 TDO2P48775 406 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 TERF1P54274 439 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 RPS8P62241 208 aaKnown RBP3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 TLE1Q04724 770 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 TARDBPQ13148 414 aaKnown RBP eCLIP3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 DYRK1AQ13627 763 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 TRIM29Q14134 588 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 STK38Q15208 465 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 ANO6Q4KMQ2 910 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 CAVIN4Q5BKX8 364 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 ANO1Q5XXA6 986 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 ADALQ6DHV7 355 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 TAPT1Q6NXT6 567 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 USP45Q70EL2 814 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 SRLQ86TD4 932 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 RAB11FIP4Q86YS3 637 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 DENND1CQ8IV53 801 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 GRAMD1CQ8IYS0 662 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 KIAA0319LQ8IZA0 1049 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 FSIP1Q8NA03 581 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 LINC00301Q8NCQ3 95 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 VPS37AQ8NEZ2 397 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 ENGASEQ8NFI3 743 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 TOR1AIP2Q8NFQ8 470 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 KCNG4Q8TDN1 519 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 ZNF384Q8TF68 577 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 WASF1Q92558 559 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 COA7Q96BR5 231 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 MVB12AQ96EY5 273 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 FAM167AQ96KS9 214 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 MAP3K14Q99558 947 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 TIMP4Q99727 224 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 CNPPD1Q9BV87 410 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 IMPG2Q9BZV3 1241 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 ANKRD2Q9GZV1 360 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 RNF41Q9H4P4 317 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 BRD9Q9H8M2 597 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 FAM204AQ9H8W3 233 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 FNIP2Q9P278 1114 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 ABCF2Q9UG63 623 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 PCDHA7Q9UN72 937 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 WNT6Q9Y6F9 365 aa3.84□□□□□ -1.79
HMGB3P11-201ENST00000440127 CCDC196A0A1B0GTZ2 297 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 CCDC154A6NI56 674 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 KIF28PB7ZC32 967 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 GOLGA6L19H0YKK7 550 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 AP5Z1O43299 807 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms